These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9208#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1036 fasta sequence [CGACCCACGCGTCCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA-GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA-CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC-GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT-CC-GTTGTGACC-GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG-ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC-TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTTACAAATC] [+] EMBL BM640731 [CGACCCACGCGTCCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCGTACCAGTTGCAACTGACCTTCACCTTTGCACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC AAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTAACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTACACGC ] [+] EMBL BM605932 [ ccgctCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTG GGCTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACCAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAA ATTGAATGCCGTGTCTGTATAAACGATTCCAAAAAGC ] [+] EMBL BM608793 [ GATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGCTTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGC ] [+] EMBL CNS08CSK [ ATTCTTCAGCTTAACTTTCACTCGTTTTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGAAGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAGATATGCTTCATCCCGATGAAGGAACCATCCAGCGCA CTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGT CCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTTAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAA ] [+] EMBL CNS08Z5Q [ ATTCTTCAGCTTAACTTTCACTCGTATTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTAGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CCGTACGGTCCTCTGCTAGTTGTGC ACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAG TCAGAATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGT ] [+] EMBL CNS09L6A [ ATTCTTCAGCTTAACTTTCACTCGTATTAAACATAGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTAGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCA CTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGT CCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAAAAAAGTGCCGGCGCTTGTTCGATGATGCACTGTTCCAATCTATGGTTCACTACAGTGAGTGAGAAATAA ] [+] EMBL CNS08G36 [ ACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CCGGTTGTGACCGGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCA CTCAGca ] [-] EMBL CNS08CSL [ ACTTTGCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCGAAACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTAACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAGATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAATCGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTTAC ] [+] EMBL BM601381 [ ccgGAACAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACT ] [+] EMBL BM593783 [ ccgAAACCCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGG ] [-] EMBL CNS09L6B [ GCGAAACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAA GGCGTTGAGATAGTCAGCTACACAGTTTCTGGAATTTTACTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTAGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAA CTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTAAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATGCACTGTTCCAATCTATGGTTCACTACAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTT ] [-] EMBL CNS08Z5R [ AGTAAAACAGTAT GTA GGTAACTAAAATAGAACCGTCACAACCGGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGC GAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAG ATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCT CGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATGCACTGTTCCAATCTATGGTTCACTACAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAA ] [-] EMBL CNS08G37 [ TACCTATCCAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGT CC GTTGTGACC GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCGGCTCAG ATTAAATGCCGTGTCTGTATAAACGATTCGAAAAAGAAAATAGATGTTGGTGAAGCATTGC TTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCACG TTTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGTCCCCGGGTTTGGCCACTATCCTTGTGGCCTGTATTGTGGGATCGTGTGACCAACCCCAACCGCGTGCCGGCGCTTGTTCGATGATACACTGTTCCAATCTATGGTTCACTAAAGTGAGTGAGAAATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTGGTGCCTTAAGCTTGTATATCTATGACAGAAAAAGCAATCAATAAAATGTTACAAATC] consensusID : consensus_9208#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 894 fasta sequence [CGAGGCAGAATCGCGCACGAGGAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGACCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGGTTTGGTGGCAAAGNTTCGTTGGGTCCCCCGGGTTTGGGCCACTATCCTTGTGGCCTGTAATTGTGGGATCGTGTGACCAAGCCGAACCGGGGTGCCGGGGCGCCTTTGGTTCGAATGGATTGCACTTGGTTCCCAATTCTTATTGGGGTCCACGTACGCAGGTGGANGTTGAGGAAACAGTTGAGTTCAGGAANANACTCTTGGGCCNAGGAAAAGGTTNGTCAAATTGCCATNATNNGTGCCAGGTAGGGGNTGGCCCTTGAAAGGCCTTGGTGAAGAATCCNTAGTTGGCACCNGGAAAGAAAAAGGCATTG] [+] EMBL BX467649 [CGAGGCAGAATCGCGCACGAGGAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTTGGTTGTGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGACCGAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGATCGTCGCAATGGGTTTGGTGGCAAAGNTTCGTTGGGTCCCCCGGGTTTGGGCCACTATCCTTGTGGCCTGTAATTGTGGGATCGTGTGACCAAGCCGAACCGGGGTGCCGGGGCGCCTTTGGTTCGAATGGATTGCACTTGGTTCCCAATTCTTATTGGGGTCCACGTACGCAGGTGGANGTTGAGGAAACAGTTGAGTTCAGGAANANACTCTTGGGCCNAGGAAAAGGTTNGTCAAATTGCCATNATNNGTGCCAGGTAGGGGNTGGCCCTTGAAAGGCCTTGGTGAAGAATCCNTAGTTGGCACCNGGAAAGAAAAAGGCATTG] consensusID : consensus_9208#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence [CCGCCCACGCGTCCGCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTATGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATAGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTACAAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAAGCTGAACGGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGCCCCCGGGTTTGGCCACTATCCT] [+] EMBL BM599794 [CCGCCCACGCGTCCGCGCGACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCGTTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTGGTTATGGCCTACAGAAAAATACGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAAGTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTAGTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATCAAGATAGATGGTATAGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACCGGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGCCGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGCTTAGCCTAGGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTACAAAATCGAAAAGATGTGCACGCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAAGCTGAACGGTACGCCAAGGATCGTCGCAATGGTTTGTGGCAAAGTTCGTTGGGCCCCCGGGTTTGGCCACTATCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9208#0 CGACCCACGCGTCCGATCAGAAAAAAATTCTTCAGCTTAACTTTCACTCGTTTTAAACAT 60 consensus_9208#2 ------------------------------------------------------------ consensus_9208#1 ------------------------------------------------------------ consensus_9208#0 AGTTATTCGACTGTATTCAAACGTCATACCAGTTGCAACTGACCTTCACCTTTGTACTTT 120 consensus_9208#2 ------------------------------------------------------------ consensus_9208#1 ------------------------------------------------------------ consensus_9208#0 GCTGAAATCGCCATCCTATAACGCACTTGGCATACATTATGGCAGCAGAACAAACCCGCG 180 consensus_9208#2 -----------------------------------------CCGCCCACGCGTCCGCGCG 19 consensus_9208#1 ------------------------------------------------------------ consensus_9208#0 ACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCG 240 consensus_9208#2 ACACTGGCACCAGTTGGTGGAAAGAATTTTCTAATTTTATGCGTAAAGATACGAAAGGCG 79 consensus_9208#1 ------------------------------CGAGGCAGAATCGCGC--ACGAGGAAGGCG 28 * * * ** * * ****** consensus_9208#0 TTGAGATAGTCAGCTACACAGTATCTGGAATTTTACT-GGTTGTGGCCTACAGAAAAATA 299 consensus_9208#2 TTGAGATAGTCAGCTACACAGTATCTGGAATTTTACT-GGTTATGGCCTACAGAAAAATA 138 consensus_9208#1 TTGAGATAGTCAGCTACACAGTATCTGGAATTTTACTTGGTTGTGGCCTACAGAAAAATA 88 ************************************* **** ***************** consensus_9208#0 CGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAA 359 consensus_9208#2 CGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCATCATTTTGTCCGTGATCAA 198 consensus_9208#1 CGCCCAGTCACTATTTTCGGGAAACCATCGGACATACCGCGTCATTTTGTCCGTGATCAA 148 **************************************** ******************* consensus_9208#0 GTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTA 419 consensus_9208#2 GTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTA 258 consensus_9208#1 GTAAAACAGTATGGTAGGGTAACTAAAATAGAACCGTCACAACTGTACGGTCCTCTGCTA 208 ************************************************************ consensus_9208#0 GTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATC 479 consensus_9208#2 GTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATC 318 consensus_9208#1 GTTGTGCAACATCATCCACCGGCGAAGGTATTTTTTTGGTCGAGCAAAACCATACCTATC 268 ************************************************************ consensus_9208#0 AAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACC 539 consensus_9208#2 AAGATAGATGGTATAGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACC 378 consensus_9208#1 AAGATAGATGGTATCGCTATCAACGCCAATGGGTATTCCTGGTTGCAGTCCGTTGTGACC 328 ************** ********************************************* consensus_9208#0 GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGC 599 consensus_9208#2 GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGC 438 consensus_9208#1 GGCAAAGAAATATGCTTCATCCCGATGAAGGAACCATCCAGCGCAGCTCAGATTGAATGC 388 ************************************************************ consensus_9208#0 CGTGTCTGTATAAACGATTCGAAAAAGCACATAGATGTTGGTGAAGCATTGCTTAGCCTA 659 consensus_9208#2 CGTGTCTGTATAAACGATTCGAAAAAGCAGATAGATGTTGGTGAAGCATTGCTTAGCCTA 498 consensus_9208#1 CGTGTCTGTATAAACGATTCGAAAAAGCAAATAGATGTTGGTGAAGCATTGCTTAGCCTA 448 ***************************** ****************************** consensus_9208#0 GGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTCCGAAATCGAAAAGATGTGCAC 719 consensus_9208#2 GGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGTACAAAATCGAAAAGATGTGCAC 558 consensus_9208#1 GGGTTCGCCAAGCTCTCCGTCCCGGTGCCAAAATCGGACCGAAATCGAAAAGATGTGCAC 508 ************************************* * ******************* consensus_9208#0 GCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGAT 779 consensus_9208#2 GCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAAGCTGAACGGTACGCCAAGGAT 618 consensus_9208#1 GCTGTCGCACTATATCAATATTATCGAACGTTGGCCAAGGCTGAACAGTACGCCAAGGAT 568 ************************************** ******* ************* consensus_9208#0 CGTCGCAATGGTTT--GTGGCAAAGTT-CGTTGGGTCCCC-GGGTTTGG-CCACTATCCT 834 consensus_9208#2 CGTCGCAATGGTTT--GTGGCAAAGTT-CGTTGGGCCCCC-GGGTTTGG-CCACTATCCT 673 consensus_9208#1 CGTCGCAATGGGTTTGGTGGCAAAGNTTCGTTGGGTCCCCCGGGTTTGGGCCACTATCCT 628 *********** ** ********* * ******* **** ******** ********** consensus_9208#0 TGTGGCCTGTA-TTGTGGGATCGTGTGACCAACCCCAACCGCG-TGCCGGCGCTTGTTCG 892 consensus_9208#2 ------------------------------------------------------------ consensus_9208#1 TGTGGCCTGTAATTGTGGGATCGTGTGACCAAGCCGAACCGGGGTGCCGGGGCGCCTTTG 688 consensus_9208#0 AT---GATACACTG--------TTCCAATCTAT-----GGTTCACTAAAGTGAGTGAGAA 936 consensus_9208#2 ------------------------------------------------------------ consensus_9208#1 GTTCGAATGGATTGCACTTGGTTCCCAATTCTTATTGGGGTCCACGTACGCAGGTGGANG 748 consensus_9208#0 ATAATAGAAAACTTGCAGTATGTGTAATGCATATTTTCTGTTG-----GTGCCTTAAGCT 991 consensus_9208#2 ------------------------------------------------------------ consensus_9208#1 TTGAGGAAACAGTTGAGTTCAGGAANANACTCTTGGGCCNAGGAAAAGGTTNGTCAAATT 808 consensus_9208#0 TGTATA-TCTATGACAG--AAAAAGCAATCAATAAAATGTT------ACAAATC------ 1036 consensus_9208#2 ------------------------------------------------------------ consensus_9208#1 GCCATNATNNGTGCCAGGTAGGGGNTGGCCCTTGAAAGGCCTTGGTGAAGAATCCNTAGT 868 consensus_9208#0 -------------------------- consensus_9208#2 -------------------------- consensus_9208#1 TGGCACCNGGAAAGAAAAAGGCATTG 894 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||