These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9234#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 954 fasta sequence [NGCAAGAAATTGCCCCGAGGTTNGCAGATAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGTGCACCAGCAGCAACGNGCTGCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGAACAAGTGAGAAGATGTGCGCTGCAAGATCAACGAGAACCCGCTTGGGTGCCGATCGGGGTGCGCCCGCCACGCTTGACCGCGCTCCGGTTCGGGCCTGTGGAACTTCCCGCAGGTGGCCGGTCCCAGATTGGTCGACAGGTACATTGTATGCGTGNGGCTGCGCATACTTGGCCAAGGGGCTTCACCCGTGATTTGCNGCTCATTCATTTGGGCGGTGGGGCATTGCACGTACGTGCAGGCCAACGGAGCCCGGATGGNCAAAAGAAGTTAGACTCCCCGGGATTATTGTNATAAGAGTTTNGTAACCCAAAATTTTGTTCGACTTTGTAATTTTATAATCTTGATTTGGAATAGAGATGCGGGGTTGGGAAGCTGGGGGAAGGGGTTGGAGAANTGGAAGAGAAGANNNATGAAACCCCCANNACACTCGCNAANATAAAGGGAAACAGAACAANAAACTGAGTACNGGNTAGGAAGAACCANGGNCGACNACNNGNAGNAACGNNCNNNANACNCAACCANACCNAANAAAAAACCGCACAANAAACAANACAACGNNANGNNNAGGCCNNAACAAGANGANAGCAAGGANACNNCNCNACACNGCNCAGANNAGCACCGAGCGCAGANCGAGAAGGCACGAGNNNCAGCAGGGAAGAACNGAAAGGAAAAACAACANGACCAACAGNGCNAGGACGNCAAGAAAACANGNACAGACAAGNCAAGNANAAAGAAACCAAGCNNNNAANACCACAGGCACCANANAC] [+] EMBL AL696381 [NGCAAGAAATTGCCCCGAGGTTNGCAGATAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGTGCACCAGCAGCAACGNGCTGCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGAACAAGTGAGAAGATGTGCGCTGCAAGATCAACGAGAACCCGCTTGGGTGCCGATCGGGGTGCGCCCGCCACGCTTGACCGCGCTCCGGTTCGGGCCTGTGGAACTTCCCGCAGGTGGCCGGTCCCAGATTGGTCGACAGGTACATTGTATGCGTGNGGCTGCGCATACTTGGCCAAGGGGCTTCACCCGTGATTTGCNGCTCATTCATTTGGGCGGTGGGGCATTGCACGTACGTGCAGGCCAACGGAGCCCGGATGGNCAAAAGAAGTTAGACTCCCCGGGATTATTGTNATAAGAGTTTNGTAACCCAAAATTTTGTTCGACTTTGTAATTTTATAATCTTGATTTGGAATAGAGATGCGGGGTTGGGAAGCTGGGGGAAGGGGTTGGAGAANTGGAAGAGAAGANNNATGAAACCCCCANNACACTCGCNAANATAAAGGGAAACAGAACAANAAACTGAGTACNGGNTAGGAAGAACCANGGNCGACNACNNGNAGNAACGNNCNNNANACNCAACCANACCNAANAAAAAACCGCACAANAAACAANACAACGNNANGNNNAGGCCNNAACAAGANGANAGCAAGGANACNNCNCNACACNGCNCAGANNAGCACCGAGCGCAGANCGAGAAGGCACGAGNNNCAGCAGGGAAGAACNGAAAGGAAAAACAACANGACCAACAGNGCNAGGACGNCAAGAAAACANGNACAGACAAGNCAAGNANAAAGAAACCAAGCNNNNAANACCACAGGCACCANANAC] consensusID : consensus_9234#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 871 fasta sequence [NGCAAAATNCCCCGAGGTTAAAATTAGTGCAATTTATTCAGCCGGAACGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCTGGCTGTGCACGCGTGAAACGACCAANGAGAAGATGGCTGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCTGGGTGCGCCGCCACGCGTGACCGCGCTCGTGCTTCGGGCTGTGGAACTTCCGCCAGGGCCCGGTCCCAGATGTACGGCAGTAACATGATGCGGGCGCGCATACCTGGCCCAGNGNCTATACACCGCTGATTGCGCTCATCATAAGGCGTGGGGCATGCACGTACGGGAGGAANGGANACCGGCGGGCAAAGAAGGTAGACTACCGGATACTTGTCAAAAAGAGTACCAAAATNAGCGCTNCCGGCCTANTGGCTANCANNACTTNNAACCTCCCTAGAACTGGGGACANTAANAAGGAATTTGCCGGGTTGNGGAAAGCCCTGGCTGNGGAAAAGGGGGGANGGCNNAGACCACCACAACGANANAACNCANCACAACAAAACANNGACANCNCAANACAAACACCCCCAGCCCACACACGCAAAACCACACANCAACCGCAACAGACCACACAAGCCCCCACCACANNCACCCCAGCACACANCCACACANAACNANCNAACAACCCCACAACANCNACAANACANNACACCGAACCACCCNCAGANAAAGANCCAGCCACNAACACCCAGCCACCAACGNAAGCAAACNCGAAC] [+] EMBL AL934576 [NGCAAAATNCCCCGAGGTTAAAATTAGTGCAATTTATTCAGCCGGAACGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCTGGCTGTGCACGCGTGAAACGACCAANGAGAAGATGGCTGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCTGGGTGCGCCGCCACGCGTGACCGCGCTCGTGCTTCGGGCTGTGGAACTTCCGCCAGGGCCCGGTCCCAGATGTACGGCAGTAACATGATGCGGGCGCGCATACCTGGCCCAGNGNCTATACACCGCTGATTGCGCTCATCATAAGGCGTGGGGCATGCACGTACGGGAGGAANGGANACCGGCGGGCAAAGAAGGTAGACTACCGGATACTTGTCAAAAAGAGTACCAAAATNAGCGCTNCCGGCCTANTGGCTANCANNACTTNNAACCTCCCTAGAACTGGGGACANTAANAAGGAATTTGCCGGGTTGNGGAAAGCCCTGGCTGNGGAAAAGGGGGGANGGCNNAGACCACCACAACGANANAACNCANCACAACAAAACANNGACANCNCAANACAAACACCCCCAGCCCACACACGCAAAACCACACANCAACCGCAACAGACCACACAAGCCCCCACCACANNCACCCCAGCACACANCCACACANAACNANCNAACAACCCCACAACANCNACAANACANNACACCGAACCACCCNCAGANAAAGANCCAGCCACNAACACCCAGCCACCAACGNAAGCAAACNCGAAC] consensusID : consensus_9234#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 737 fasta sequence [CCGAGGTTTACTCACAGGTGATTTCGTGTTGATGCGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA-GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT-GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCTGGGGAAGGGTGGTGATGGGGCGAGCGGTGACCTAATGCATTTGCACCACCTCGTCGGTGACCGTTCGGCCCCATCCCCACCCCCTTTCTCTCTCTCGCTGATGCAACCCGCAGTCGGCGGGGCCAGGGCTAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTTCCCGGGCTGTT] [+] EMBL AL695414 [CCGAGGTTTACTCACAGGTGATTTCGTGTTGATGCGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTTGGTTTTTTTTTGTA ] [+] EMBL CNS08J5G [ acacttTCACAGGTGATTTCGTGTTGATGCGAAATTAGTGCAA TTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGGGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGCTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCTGGGGAAGGGTGGTGATGGGGCGAGCGGTGACCTAATGCATTTGCACCACCTCGTCGGTGACCGTTCGGCCCCATCCCCACCCCCTTTCTCTCTCTCGCTGATGCAACCCGCAGTCGGCGGGGCCAGGGCTAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTTCCCGGGCTGTT] [+] EMBL BM641890 [ ccGCGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTTGGTTTTTTTTTGTACCAAAATTTGTTC ] [+] EMBL BX627671 [ GTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTG ] [+] EMBL BM652367 [ ccgCGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGAT GCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTTGGTTTTTTTTTGTACCAAAATTTGTTCGC ] [+] EMBL BX625445 [ AGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGG ] [+] EMBL BX618247 [ ACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACTGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCTTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCTGGGGA ] [+] EMBL BX614234 [ GCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCT ] [-] EMBL CNS08J5H [ ACCGCGCTCGGCTTCGGGCTGTGGAACTTCCCCCAGGGCCGGTCCCAGTTTTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATAATTGGCGTGGGCATAACGTACGGCAGCAAGGGCGCCGGCGGCAAAGAAGTAAACCCCCGGATTT GTTTTTTTTTGTACCAAAATTTGCTCGCTTGTAATTTTAATCTGATTGG ] consensusID : consensus_9234#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 668 fasta sequence [CCGAGGTTATACACACACGCTCACAGGTGATTTCGTGTTGATGCTGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCATGCAGCACATCGAACGATGGCTACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATTGCTGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGNNACTTCCGCCAGGGGCCGGTCCCCAGATGTCGCAGTACATTGATGCGGGCTGCGCATTCCTTGTGCCCCAGGGGCTTTCACCCGGTGATTTGCGCTCAATCATATGGGCCGTTGGGCCACTGAACGGTACCGGCCACGCCACAAGGGAAGACCCCCTGTGGCNCGGGGCNCAAACGAAAAAGCTTACGAACTTCCCCCCCGGAACTTTCNGGGTTATANATCATCATCTGGTNAACCCCCAACAAACAATTTTTGGNATCCNGCCTTTGGCGTAACACNTTNTATCTAACACTCCCTCGGACTTTCGGGCCCACTTACACA] [+] EMBL AL694173 [CCGAGGTTATACACACACGCTCACAGGTGATTTCGTGTTGATGCTGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCATGCAGCACATCGAACGATGGCTACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATTGCTGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGNNACTTCCGCCAGGGGCCGGTCCCCAGATGTCGCAGTACATTGATGCGGGCTGCGCATTCCTTGTGCCCCAGGGGCTTTCACCCGGTGATTTGCGCTCAATCATATGGGCCGTTGGGCCACTGAACGGTACCGGCCACGCCACAAGGGAAGACCCCCTGTGGCNCGGGGCNCAAACGAAAAAGCTTACGAACTTCCCCCCCGGAACTTTCNGGGTTATANATCATCATCTGGTNAACCCCCAACAAACAATTTTTGGNATCCNGCCTTTGGCGTAACACNTTNTATCTAACACTCCCTCGGACTTTCGGGCCCACTTACACA] consensusID : consensus_9234#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence [CAATTTTGTACCCACTGTCGTTGACCCTACCATCCCCGTTCCCTGCTCTCTCGCCGCAGTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACTACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGTAGCAAGGAGCCGGAGGCAAAGAAGTAGACTCCCGGATTATTTTTTTTGTACCAAAATTTGTTGCTTGTAATTTTAATCTGATTGGAATAG] [+] EMBL BX626898 [CAATTTTGTACCCACTGTCGTTGACCCTACCATCCCCGTTCCCTGCTCTCTCGCCGCAGTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACTACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGTAGCAAGGAGCCGGAGGCAAAGAAGTAGACTCCCGGATTATTTTTTTTGTACCAAAATTTGTTGCTTGTAATTTTAATCTGATTGGAATAG] consensusID : consensus_9234#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence [GCATCGGGTAAGGAATAGTGCAACTTTACTTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAAGGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTCG] [+] EMBL BX469020 [GCATCGGGTAAGGAATAGTGCAACTTTACTTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAAGGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTCG] consensusID : consensus_9234#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 421 fasta sequence [AATGCCCCGGTTANAACACACGCTCACAGGTGATTCGTGTTGATGCTNAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCTGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGGCACCAGNCAGCAACGGCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGNNTACAGATGCGGAAGGACTTTTCCGGCGTGCACCGCGGAAACGAGACCAACGGAGAAGATGGNCGCCGCAAGATCCAACGAGAAACCCGCTGGGTGCCGATCTGGGGTTGCGCCCGCAACGCTGAACCGGGCTCGGGCNTTCCGGGGCCTGTAGGAAACTTCCCGCCAGGGCCGGTCCCAGATGTTCNGGGCAAGGTAACAATGGATTGCGG] [+] EMBL AL694253 [AATGCCCCGGTTANAACACACGCTCACAGGTGATTCGTGTTGATGCTNAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCTGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGGCACCAGNCAGCAACGGCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGNNTACAGATGCGGAAGGACTTTTCCGGCGTGCACCGCGGAAACGAGACCAACGGAGAAGATGGNCGCCGCAAGATCCAACGAGAAACCCGCTGGGTGCCGATCTGGGGTTGCGCCCGCAACGCTGAACCGGGCTCGGGCNTTCCGGGGCCTGTAGGAAACTTCCCGCCAGGGCCGGTCCCAGATGTTCNGGGCAAGGTAACAATGGATTGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9234#2 ------------CCGAGGTT-TACTCACAGGTGATTTCGTGTTGATGCGAAA-TTAGTGC 46 consensus_9234#4 -------------CAATTTTGTACCCACTGTCGTTGACCCTACCATCCCCGT-TCCCTGC 46 consensus_9234#0 ------------------------------------------------------------ consensus_9234#5 --------------------------------------GCATCGGGTAAGGA-ATAGTGC 21 consensus_9234#1 -----------------------------------NGCAAAATNCCCCGAGG-TTAAAAT 24 consensus_9234#3 ----CCGAGGTTATACACACACGCTCACAGGTGATTTCGTGTTGATGCTGAAATTAGTGC 56 consensus_9234#6 AATGCCCCGGTTANA-ACACACGCTCACAGGTGATT-CGTGTTGATGCTNAA-TTAGTGC 57 consensus_9234#2 AACTTT-----ATTCAGCCGGAACCGAAACGCAG--CGCAGATCAAAACCACTCGCAACG 99 consensus_9234#4 TCTCTCGCCGCAGTCAGCCGGAACCGAAACGCAG--CGCAGATCAAAACCACTCGCAACG 104 consensus_9234#0 --------------NGCAAGAAATTGCCCCGAGGTTNGCAGAT-AAAACCACTCGCAACG 45 consensus_9234#5 AACTTTA----CTTCAGCCGGAACCGAAACGCAG--CGCAGATCAAAACCACTCGCAACG 75 consensus_9234#1 TAGTGCAATTTATTCAGCCGGAAC-GAAACGCAG--CGCAGATCAAAACCACTCGCAACG 81 consensus_9234#3 AACTTT-----ATTCAGCCGGAACCGAAACGCAGC--GCAGATCAAAACCACTCGCAACG 109 consensus_9234#6 AACTTT-----ATTCAGCCGGAACCGAAACGCAGC-TGCAGATCAAAACCACTCGCAACG 111 * ** * ** * ****** **************** consensus_9234#2 CCCATCAACAACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 156 consensus_9234#4 CCCATCAACTACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 161 consensus_9234#0 CCCATCAACAACGCAAGAGCA-GCAGCACATCTGAACGATGTGCACCAGCAGCAACGNGC 104 consensus_9234#5 CCCATCAACAACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 132 consensus_9234#1 CCCATCAACAACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 138 consensus_9234#3 CCCATCAACAACGCAAGAGCATGCAGCACATC-GAACGATGGCTACCAGCAGCAACGGCC 168 consensus_9234#6 CCCATCAACAACGCAAGAGCA-GCAGCACATCTGAACGATGGCACCAGNCAGCAACGGC- 169 ********* *********** ********** ******** * ******** consensus_9234#2 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 213 consensus_9234#4 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 218 consensus_9234#0 TGCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 161 consensus_9234#5 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 189 consensus_9234#1 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 195 consensus_9234#3 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATTGCTGGAAGGAC 227 consensus_9234#6 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGNNTACAGATG--CGGAAGGAC 227 ************************************* ****** ******** consensus_9234#2 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAG-GAGAAGATG-GCGC-GCAAGATC 264 consensus_9234#4 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAG-GAGAAGATG-GCGC-GCAAGATC 269 consensus_9234#0 TTTTCCGG--CGTGCAC-GCG-GAAACGA--ACAAGTGAGAAGATGTGCGCTGCAAGATC 215 consensus_9234#5 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAG-GAGAAGATG-GCGC-GCAAGATC 240 consensus_9234#1 TTTTCCTGGCTGTGCAC-GCGTGAAACGA--CCAAN-GAGAAGATGGCTGC-GCAAGATC 250 consensus_9234#3 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAAGGAGAAGATGGCG--CGCAAGATC 279 consensus_9234#6 TTTTCCGG--CGTGCACCGCG-GAAACGAGACCAACGGAGAAGATGGNCGCCGCAAGATC 284 ****** * ****** *** ******* *** ********* ******** consensus_9234#2 -AACGAGAA-CCCGCT--GGTGCCGATCGGG---TGCGCC-GCCACGCT-GACCGCGCTC 315 consensus_9234#4 -AACGAGAA-CCCGCT--GGTGCCGATCGGG---TGCGCC-GCCACGCT-GACCGCGCTC 320 consensus_9234#0 -AACGAGAA-CCCGCTTGGGTGCCGATCGGGG--TGCGCCCGCCACGCTTGACCGCGCTC 271 consensus_9234#5 -AACGAGAA-CCCGCT--GGTGCCGATCGGG---TGCGCC-GCCACGCT-GACCGCGCTC 291 consensus_9234#1 -AACGAGAA-CCCGCT--GGTGCCGATCTGGG--TGCGCC-GCCACGCGTGACCGCGCTC 303 consensus_9234#3 -AACGAGAA-CCCGCT-GGGTGCCGATCGGG---TGCGCC-GCCACGCTGA-CCGCGCTC 331 consensus_9234#6 CAACGAGAAACCCGCT-GGGTGCCGATCTGGGGTTGCGCCCGCAACGCTGAACCGGGCTC 343 ******** ****** ********** ** ****** ** **** *** **** consensus_9234#2 G--GCTTCGGGC---TGT--GGAACTTCCGCCAGG--GCCGGTCCC-AGAT--GTCG--- 360 consensus_9234#4 G--GCTTCGGGC---TGT--GGAACTTCCGCCAGG--GCCGGTCCC-AGAT--GTCG--- 365 consensus_9234#0 C--GGTTCGGGCC--TGT--GGAACTTCCCGCAGGTGGCCGGTCCC-AGATTGGTCGACA 324 consensus_9234#5 G--GCTTCGGGC---TGT--GGAACTTCCGCCAGG--GCCGGTCCC-AGAT--GTCG--- 336 consensus_9234#1 GT-GCTTCGGGC---TGT--GGAACTTCCGCCAGG-GCCCGGTCCC-AGATGTACGG--- 352 consensus_9234#3 GG--CTTCGGG---CTGT-GGNNACTTCCGCCAGG-GGCCGGTCCCCAGAT-GT-CG--- 379 consensus_9234#6 GGGCNTTCCGGGGCCTGTAGGAAACTTCCCGCCAG-GGCCGGTCCC-AGAT-GTTCN--- 397 *** ** *** * ****** * * ******** **** consensus_9234#2 ----CAGTA-CATG-ATG--CGGGCGCGCATCCTG---GCCCA--GGGCTT--CACC-GT 404 consensus_9234#4 ----CAGTA-CATG-ATG--CGGGCGCGCATCCTG---GCCCA--GGGCTT--CACC-GT 409 consensus_9234#0 GGTACATTG-TATGCGTG--NGGCTGCGCATACTT---GGCCAAGGGGCTT--CACCCGT 376 consensus_9234#5 ----CAGTA-CATG-ATG--CGGGCGCGCATCCTG---GCCCA--GGGCTT--CACC-GT 380 consensus_9234#1 ----CAGTAACATG-ATG--CGGGCGCGCATACCT---GGCCCAGNGNCTATACACCGCT 402 consensus_9234#3 ----CAGTACATTG-ATG-CGGGCTGCGCATTCCTTGTGCCCCAGGGGCTTTCACCCGGT 433 consensus_9234#6 ----GGGCAAGGTA-ACAATGGATTGCGG------------------------------- 421 * * *** consensus_9234#2 GATTG--CGCTCAT-CATTGGCGTGG----GCATG--ACGTACG-GCAG--CAA-GGAGC 451 consensus_9234#4 GATTG--CGCTCAT-CATTGGCGTGG----GCATG--ACGTACG-GTAG--CAA-GGAGC 456 consensus_9234#0 GATTTGCNGCTCATTCATTTGGGCGGTGGGGCATTGCACGTACGTGCAGGCCAACGGAGC 436 consensus_9234#5 GATTG--CGCTCAT-CATTGGCGTGG----GCATG--ACGTACG-GCAG--CAA-GGAGC 427 consensus_9234#1 GATTG--CGCTCATCATAAGGCGTGG---GGCATG-CACGTACGGGAGG---AANGGANA 453 consensus_9234#3 GATTTG-CGCTCAATCATATGGGCCG---------------TTGGGCCACTGAACGGTAC 477 consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 C--GGCGGC--AAAGAAGT-AGACTCCC--GGATTTGTTTTTT------TTTGTA--CCA 496 consensus_9234#4 C--GGAGGC--AAAGAAGT-AGACTCCC--GGATTA--TTTTT------TTTGTA--CCA 499 consensus_9234#0 CCGGATGGNCAAAAGAAGTTAGACTCCCCGGGATTATTGTNATAAGAGTTTNGTAACCCA 496 consensus_9234#5 C--GGCGGC--AAAGAAGT-AGACTCCC--GGATTCG----------------------- 457 consensus_9234#1 CCGGCGGGC--AAAGAAGGTAGACTACC--GGATACTTGTCAAAAAGAGTACCAAAATNA 509 consensus_9234#3 C--GGCCACGCCACAAGGGAAGACCCCCTGTGGCNCGGGGCNCAAACGAAAAAGCTTACG 535 consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 AAATTT-------GTTCG--CTTGTAATTTTA--ATCT-----GA--TTGGAATAGAGAT 538 consensus_9234#4 AAATTT-------GTT-G--CTTGTAATTTTA--ATCT-----GA--TTGGAATAG---- 536 consensus_9234#0 AAATTTT------GTTCGACTTTGTAATTTTATAATCT-----TGATTTGGAATAGAGAT 545 consensus_9234#5 ------------------------------------------------------------ consensus_9234#1 GCGCTNCCGGCCTANTGGCTANCANNACTTNN-AACCTCCCTAGAACTGGGGACANTAAN 568 consensus_9234#3 AACTTCCC---CCCCGGAACTTTCNGGGTTATANATCATCATCTGGTNAACCCCCAACAA 592 consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 GCGGGT---GGGAGCTGGGGAAGGGTGGTGATGGGGCG--AGCGGTGACCTAATGCATTT 593 consensus_9234#4 ------------------------------------------------------------ consensus_9234#0 GCGGGGTTGGGAAGCTGGGGGAAGGGGTTGGAGAANTGGAAGAGAAGANNNATGAAACCC 605 consensus_9234#5 ------------------------------------------------------------ consensus_9234#1 AAGGAATTTGCCGGGTTGNGGAAAGCCCTGGCTGNGGAAAAGGGGGGANGGCNNAGACCA 628 consensus_9234#3 ACAATTTTTGGNATCCNGCCTTTGGCGTAACACNTTNTATCTAACACTCCCTCGGACTTT 652 consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 GCACCAC-CTCGTCGGTG---------ACCGTTCGGCCCCATCCCCACCCCCTTTCTCTC 643 consensus_9234#4 ------------------------------------------------------------ consensus_9234#0 CCANNACACTCGCNAANATAAAGGGAAACAGAACAANAAACTGAGTACNGGNTAGGAAGA 665 consensus_9234#5 ------------------------------------------------------------ consensus_9234#1 CCACAACGANANAACNCANCACAACAAAACANNGACANCNCAANACAAACACCCCCAGCC 688 consensus_9234#3 CGGGCCCACTTACACA-------------------------------------------- 668 consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 TCTCGCTGATGCAACCCGCAGTCGGCGGGGCCAGGGCTAGCTAAAAAAAAAAAAAAAAAA 703 consensus_9234#4 ------------------------------------------------------------ consensus_9234#0 ACCANGGNCGACNACNNGNAGNAACGNNCNNNANACNCAACCANACCNAANAAAAAACCG 725 consensus_9234#5 ------------------------------------------------------------ consensus_9234#1 CACACACGCAAAACCACACANCAAC-CGCAACAGACCACACAAGCCCCCACCACANNCAC 747 consensus_9234#3 ------------------------------------------------------------ consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 AAAAAAAAAAAAGGCCACATGTTCCCGGGCTGTT-------------------------- 737 consensus_9234#4 ------------------------------------------------------------ consensus_9234#0 CACAANAAACAANACAACGNNANGNNNAGGCCNNAACAAGANGANAGCAAGGANACNNCN 785 consensus_9234#5 ------------------------------------------------------------ consensus_9234#1 CCCAGCACACANCCACACANAACNANCNAACAACCCCACAACANCNACAANACANNACAC 807 consensus_9234#3 ------------------------------------------------------------ consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 ------------------------------------------------------------ consensus_9234#4 ------------------------------------------------------------ consensus_9234#0 CNACACNGCNC-AGANNAGCACCGAGCGCAGANCGAGAAGGCACGAGNNNCAGCAGGGAA 844 consensus_9234#5 ------------------------------------------------------------ consensus_9234#1 CGAACCACCCNCAGANAAAGANCCAGCCACNAACACCCAGCCACCAACGNAAGCAAACNC 867 consensus_9234#3 ------------------------------------------------------------ consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 ------------------------------------------------------------ consensus_9234#4 ------------------------------------------------------------ consensus_9234#0 GAACNGAAAGGAAAAACAACANGACCAACAGNGCNAGGACGNCAAGAAAACANGNACAGA 904 consensus_9234#5 ------------------------------------------------------------ consensus_9234#1 GAAC-------------------------------------------------------- 871 consensus_9234#3 ------------------------------------------------------------ consensus_9234#6 ------------------------------------------------------------ consensus_9234#2 -------------------------------------------------- consensus_9234#4 -------------------------------------------------- consensus_9234#0 CAAGNCAAGNANAAAGAAACCAAGCNNNNAANACCACAGGCACCANANAC 954 consensus_9234#5 -------------------------------------------------- consensus_9234#1 -------------------------------------------------- consensus_9234#3 -------------------------------------------------- consensus_9234#6 -------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||