These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1721 fasta sequence [CCGAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACAAGCCGTCATGGCGCTACTGGTGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCTTCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGAGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT-GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC-GGGGCATTGTG-AGTGCGGC-GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGAGTCGACAAGGTGCCGCGCTACTTCTTGGGCGGCCTGATGGTGTTTAGCTTCCCGCACTGCCGGGCGGAGGGAAGCGAGATGTTTGTA] [+] EMBL BM578490 [CCGAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACAAGCCGTCATGGCGCTACTGGTGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCTTCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGAGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATACTTCATCCAAAGTATGACCGGCACACCTTCAACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCTATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAGTGCA ] [+] EMBL BM595355 [ ccgTATTAATTCAACAACCTTTTGAAGTTGCTGCTTCAACGTGTGGAGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGTGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCACACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGT ] [+] EMBL BM607808 [ CCGCATGAAGTCTGCGAAACCAGAATACAAGTGTGGCGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGTATACACCATCTGAACAACGATAACGACACGAGCGTGATCGTTTACAACCTGTTCGAGATCATCCTCCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCTTTCTCCATCTTCCCGATCTGCTTATGGCCGTCGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCTGTTGGGTTTGGATTTGATGAGACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTCAATGAAGGTAATCGAGAAGCAGCAGTGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGAACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGTGGGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGCGGGGGCATTGTGAAGTGCGGCGGGCCCGGC ] [+] EMBL BX624832 [ AACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAANAAGCCGGTGNTCAATCAGTACCCGTGGAATGCGCTG ] [+] EMBL BX603630 [ GGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGG ] [+] EMBL BX602686 [ AGACGCACCGTATCAGCTAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAG ] [+] EMBL BX615350 [ CTCTATGAAGGTAATCGAGAAGCAGCTTTGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGTGTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGT GGCGGTGGGTTGTACTTCGCAAAGGATCAGGTTTGGTACCTGC GGGGCATTGTG AGTGCGGC GGCTCGGCGTGATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGTCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAAT ] [+] EMBL BX622500 [ AGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGGCGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCAAGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGGTGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGACACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAGCCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGANGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGAGTCGACAAGGTGCCGCGC ] [+] EMBL BM629031 [ ccgCGCGATACGTCCTTGCGTTGGGGCACTGTGTAGAGGGAGTGTTCAGTAACTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGAAAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGAGTCGACAAGGTGCCGCGCTACTTCTTGGGCGGCCTGATGGTGTTTAGCTTCCCGCACTGCCGGGCGGAGGGAAGCGAGATGTTTGTA] [+] EMBL BX621286 [ ACTACAACAAACCGCAGTATGNCAACAATCTCNCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAANCCGAACATTAAACCCATCTGTCTGCCAGCGGNCNACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGNTCATCTTTCCCAAGATGGAGCGCNACGNAATGAACCTCACTTCGNCGATAACCTGTCNCAATGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCNAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCNAGCGAGNCGAC ] consensusID : consensus_9243#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 769 fasta sequence [CCGGTGCAATCAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACGAGCCGTCATGGCGCTACTGGGGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCATGTAATTCTACACCGAAATAGGGAAGATTTTTTCTTAACATTAGTACCTGATGTACAATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTCTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTTGCACTGTTTGCCCACATGAAGTCTGCGAAACCAGAATACAAGTGTGGCGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAAACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTC] [+] EMBL BM656283 [CCGGTGCAATCAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGTGTTGGGGAATACCCATACGAGCCGTCATGGCGCTACTGGGGCTGCTATTAATTCAACAACCTTCTGAAGTTGCTGCATGTAATTCTACACCGAAATAGGGAAGATTTTTTCTTAACATTAGTACCTGATGTACAATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTCTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTTGCACTGTTTGCCCACATGAAGTCTGCGAAACCAGAATACAAGTGTGGCGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGTATACACCATCTGAACAACGATAACGACACGAGCGTGATCGTTTACAACCTGTTCGAGATCATCCTCCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCTTTCTCCATCTTCCCGATCTGCTTATGGCCGTCGCACAACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCTGGTGGGTTTGGATTTGATGAAACGCACCGCATCAGCGAAACGCTTC ] [+] EMBL BX602859 [ AATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACATGAAGTCTGAGAAACCAGCATACAAGTGTGGTGGATCGATTATCAGTCAACACTTTGTGCTTTCCGCTGCACACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATGAGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTC] [+] EMBL BX604864 [ AACCGAACCCCGATCACTATTTCCTGAAGGCTGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTG ] consensusID : consensus_9243#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 555 fasta sequence [CAGATCGCCCGACGGTGNATTCTAATACACCCGCGATACGTCCTTGCGGTGGNTGCACTGTGTAGAGGGAGTGTTCAGTAACGTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAGCCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGCATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGA] [+] EMBL AL697004 [CAGATCGCCCGACGGTGNATTCTAATACACCCGCGATACGTCCTTGCGGTGGNTGCACTGTGTAGAGGGAGTGTTCAGTAACGTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAGCCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTGGAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGATAACCTGTCGCAGTGAGTACGACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGCATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACTGTCACAACTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGA] consensusID : consensus_9243#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence [GCAGAATCGGCACTAGAGCGTCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGCGGCTGGAAGCGCAATAAGCTTGTCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGAGTAACCTGTCGCAGTGAGTACGAAAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACGTGTCACAACGTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGGGTCGACNAAGGTACCGACGCTACTTCTTGGCCGGGACCTGACTGGCTCGTTNCT] [+] EMBL BX468310 [GCAGAATCGGCACTAGAGCGTCTTGGGGAGTACAACATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATCGGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAACCGCAGTATGCCAACAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAGCAAACCGAACATTAAACCCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGCGGCTGGAAGCGCAATAAGCTTGTCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTCGAGTAACCTGTCGCAGTGAGTACGAAAAACTTGGCGTCGTTCTGCCTCCCACCGAGGATGTGCTGTGTGCGGTGTACAAGACACGTCCGAAGGGTCACGTGTCACAACGTACGCCACCGGCTCGCCGCTGCAGTACATCAAGCGGGTCGACNAAGGTACCGACGCTACTTCTTGGCCGGGACCTGACTGGCTCGTTNCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 CCGAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAGT 60 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 GTTGGGGAATACCCATACAAGCCGTCATGGCGCTACTGGTGCTGCTATTAATTCAACAAC 120 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 CTTCTGAAGTTGCTGCTTCAACGTGTGGCGTACGTCGTCTTTCCCCAATGGGACTCGTCA 180 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 CGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTGGCACTGTTTGCCCACA 240 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 TGAAGTCTGAGAAACCAGCATACAAGTGTGGAGGATCGATTATCAGTCAACACTTTGTGC 300 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 TTTCCGCTGCTCACTGTATAAAGGAACCGAACCCCGATCACTATTTCCTGAAGGCAGGCA 360 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 TACACCATCTCAACAACGATAACGACACGAGCGTGGTCGTTTACAACCTGTTCGAGATCA 420 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 TCCTTCATCCAAAGTATGACCGGCACACCTTCTACAACGACATTGCCCTGATGCGCCCTG 480 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 ATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCCGATCTGCTTATGGCCGACGCACA 540 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 ACGCCACCCTGATCGACGTTCTGAGCCGGTCCGGCATAGCCGTTGGGTTTGGATTTGATG 600 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 AGACGCACCGTATCAGCGAAACGCTTCAGCAAGCCTCTATGAAGGTAATCGAGAAGCAGC 660 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 AATGCATTGAGCAGCTGCCCGAGCACGTTCGCTTTCTGCCGCAGGATGCGGGCAAGATGT 720 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 GTGCGATCGGGACGGAATCGGGTGCGAACGTGTGCTCCGGTGACAGTGGCGGTGGGTTGT 780 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 ACTTCGCAAAGGATCAGGTTTGGTACCTGCGGGGCATTGTGAGTGCGGCGGCTCGGCGTG 840 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 ATCTGGACACGGGTGAGGCTACGTGCAATGCAGCCCTGCCAGCGACGTACACCGATGTGG 900 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 CGCAGTACACGACCTGGATCAATGCGCACCAGCAGTTAGTGGATCAGCGCAATCTGCTCA 960 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 AGCTGGAGGACTGTGGCGTGGCCCGCAACTCGGAGGTGCAGGATGAGATGAAGAAGCCGG 1020 consensus_9243#1 ------------------------------------------------------------ consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 TGTTCAATCAGTACCCGTGGAATGCGCTGCTGGAGTTCCGGCAGCTTGACAAGGTGCAGA 1080 consensus_9243#1 -----------------------------------------------------CCGGTGC 7 consensus_9243#2 --CAGATCGCCCGACGGTGNATTCTAATACACCCGCGATACGTCCTTGCGGTGGNTGCAC 58 consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 CACATCTGGTGTGCAGTGGCATTCTAATACACCCGCGATACGTCCTTGCGGTGGG-GCAC 1139 consensus_9243#1 AATCAAACGGTCGTGTGTTGTTTCTGTTTCTCGTTCAGCATGGGAAAGGTTATCAGCGAG 67 consensus_9243#2 TGTGTAGAGGGAGTGTTCAGTAACGTATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAA 118 consensus_9243#3 ------------------------GCAGAATCGGCACTAGAG-CGTCTTGGGGAGTACAA 35 consensus_9243#0 TGTGTAGAGGGAGTGTTCAGTAAC-TATAAGCTGCAATCGGTTCGCCTTGGGGAGTACAA 1198 consensus_9243#1 TGTTGGGGAATACCCATACGAGCCGTCATGGCGCTACTGGGGCTGCTATTAATTCAACAA 127 * * * * * * **** consensus_9243#2 CATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATC 178 consensus_9243#3 CATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATC 95 consensus_9243#0 CATCCGCTCGGTGGAAGACGCGGATCCGAACGCTCCGGCCACAACGATCACGTCCCAATC 1258 consensus_9243#1 CCTTCTGAAGTTGCTGCATGTAATTCT--ACACCGAAATAGGGAAGATTTTTTCTTAACA 185 * * * * ** * * ** ** * * *** ** ** consensus_9243#2 GGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAAC---CGCAGTATGCCAA 235 consensus_9243#3 GGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAAC---CGCAGTATGCCAA 152 consensus_9243#0 GGTGGACATCGAGCAGGTGTTCTTCCATCCCAACTACAACAAAC---CGCAGTATGCCAA 1315 consensus_9243#1 TTAGTACCTGATGTACA-ATATTTAAATTTTAGCAACGTGTGGCGTACGTCGTCTCTCCC 244 * ** * * * * ** ** * * ** * ** ** * * consensus_9243#2 CAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAG--CAAACCGAACATTAAG 293 consensus_9243#3 CAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAG--CAAACCGAACATTAAA 210 consensus_9243#0 CAATCTCGCTCTGCTCAAGCTGAAGCACAACGCAGATACGAG--CAAACCGAACATTAAA 1373 consensus_9243#1 CAATGGGACTCGTCACGAAAGGCATCATAGCTGAGCCAGGAGATTGGCCTTGGCATGTTG 304 **** *** * * * * * ** * * ** * *** * *** consensus_9243#2 C-CCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTG 352 consensus_9243#3 C-CCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGCGGCTG 269 consensus_9243#0 C-CCATCTGTCTGCCAGCGGTCGACGATTACAAGGAGACGTTCCTGACGGTGAGTGGCTG 1432 consensus_9243#1 CACTGTTTGCCCACATGAAGTCTGCGAA-ACCAGAATACAAGTGTGGCGG--ATCGATTA 361 * * * ** * * * *** *** ** ** * ** ** *** * * * consensus_9243#2 GAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTC 412 consensus_9243#3 GAAGCGCAATAAGCTTGTCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTC 329 consensus_9243#0 GAAGCGCAATAAGCTCATCTTTCCCAAGATGGAGCGCGACGCAATGAACCTCACTTCGTC 1492 consensus_9243#1 TCAGT-CAACAC-TTTGTGCTTTCCGCTGCTCACTGTATA--AAGGAACCGAACCCCGAT 417 ** *** * * * ** ** * * ** ***** ** ** consensus_9243#2 GA-TAACCTGTCGCAGTGAGTACG-ACAAACTTGGCGTCGTTCTGCCTCCCACCGAGGC- 469 consensus_9243#3 GAGTAACCTGTCGCAGTGAGTACG-AAAAACTTGGCGTCGTTCTGCCTCCCACCGAGG-- 386 consensus_9243#0 GA-TAACCTGTCGCAGTGAGTACG-ACAAACTTGGCGTCGTTCTGCCTCCCACCGAGG-- 1548 consensus_9243#1 CACTATTTCCTGAAGGCAGGCATACACCATCTCAACAACGATAACGACACGAGCGTGGTC 477 * ** * * * * * * ** * ** * * * ** ** consensus_9243#2 ATGTGCTGTGTGCG-GTGTACAAGACACGTCCGAAGGGTCAC-TGTCACAAC---TACGC 524 consensus_9243#3 ATGTGCTGTGTGCG-GTGTACAAGACACGTCCGAAGGGTCACGTGTCACAACG--TACGC 443 consensus_9243#0 ATGTGCTGTGTGCG-GTGTACAAGACACGTCCGAAGGGTCAC-TGTCACAAC---TACGC 1603 consensus_9243#1 GTTTACAACCTGTTCGAGATCATCCTTCATCCAAAGTATGAC-CGGCACACCTTCTACAA 536 * * * ** * * ** * *** *** * ** * **** * *** consensus_9243#2 CACCGGCTCGCCGCTGCAGTAC-ATCAAGCGA---------------------------- 555 consensus_9243#3 CACCGGCTCGCCGCTGCAGTAC-ATCAAGCGGGTCGACNAAGGTACCGACGCTACTTCTT 502 consensus_9243#0 CACCGGCTCGCCGCTGCAGTAC-ATCAAGCGAGTCGACAA-GGTGCCG-CGCTACTTCTT 1660 consensus_9243#1 CGACATTGCCCTGATGCGCCCTGATCGAGCGATCTCGTTCGCTTCGTTCTCCATCTTCCC 596 * * * * * *** *** **** consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 GGCCGGGACCTGACTGGCTCGTTNCT---------------------------------- 528 consensus_9243#0 GGGCGGCCTGATGGTGTTTAGCTTCCCGCACTGCCGGGCGGAGGGAAGCGAGATGTTTGT 1720 consensus_9243#1 GATCTGCTTATGGCCGACGCACAACGCCACCCTGATCGACGTTTTGAGCCGGTCCGGCAT 656 consensus_9243#2 ------------------------------------------------------------ consensus_9243#3 ------------------------------------------------------------ consensus_9243#0 A----------------------------------------------------------- 1721 consensus_9243#1 AGCCGTTGGGTTTGGATTTGATGAAACGCACCGCATCAGCGAAACGCTTCAGCAAGCCTC 716 consensus_9243#2 ----------------------------------------------------- consensus_9243#3 ----------------------------------------------------- consensus_9243#0 ----------------------------------------------------- consensus_9243#1 TATGAAGGTAATCGAGAAGCAGCAATGCATTGAGCAGCTGCCCGAGCACGTTC 769 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||