These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9247#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1189 fasta sequence [TATTTTCTACACTTACGCCACCGTCAAATAGTAGTTTATT-TCCTAGACGGTTACCTCTAGATGGCTTTTAGCGTGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCATAGTTCACACGGCCACGACAACGAATGGTGTGACTGATCAAAACCGATACTTCCCAATTGTGATTCGTCGGATGCAGTGGGTTGCACATGCAGGCTAGAAGGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTGGTTCTGTTGTTGATGTTGATTTTGAATTGCAATATTGTTTACGACGGTCGTCACTACTGTCTGATGGTTGGTCTGCATTGGTGATGTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTAAAATTAAAGCCAGAAATGGAATGTAGAGTTAAATAAACAAGAATAGTAAGATGTCGTCGATTTTAGGTGAACGTAGTCTGAGACAGGAAAAAATAGGAGCCTGACATGTTTAAACACTAAAAACGATCTTCGAATCAAATTGAAAGTAGTGATGAACGAGGATCTCCAACTTTTTCATGCCATAATTTCTTTTTTCCCTGCTAAAAGTAAATTATTCTGGATTCAAACCTATCGTGAATGAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTGAACTTATTCATGTGTATCACCAGTTTGTCACGGCGCGCAAACGCTCGATCGCACACTTCGCAGACGTACGGCTTTTCGCCGGTATGTATGCGCATGTGGATGGTCAATTTATCCTTGCGTGCTAACCCTTTTCCACACACGGAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCCGGATGCCTTGCTTTTCACTGAAGACGCTTTTGAACGTAAGGCGCTAGAAGTAGCGACTGTTGCAGCTGC-ACAGCAGCAGCTGATGACTGATGCACTTGCTGCAAGGCCTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCTGGGCCGTACAATTAGCGTTCGACAAACAGGATAACGAGCAAATTGCAAGTCGTGGTAAACGAAAATGAAAGAGAGGACGAGGTTAGATGTAATCTAGCAGTATCGGACAACACGATGTNCCA] [+] EMBL CNS099EG [TATTTTCTACACTTACGCCACCGTCAAATAGTAGTTTATT TCCTAGACGGTTACCTCTAGATGGCTTTTAGCGTGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCATAGTTCACACGGCCACGACAACGAATGGTGTGACTGATCAAAACCGATACTTCCCAATTGTGATTCGTCGGATGCAGTGGGTTGCACATGCAGGCTAGAAGGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTGGTTCTGTTGTTGATGTTGATTTTGAATTGCAATATTGTTTACGACGGTCGTCACTACTGTCTGATGGTTGGTCTGCATTGGTGATGTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTAAAATTAAAGCCAGAAATGGAATGTAGAGTTAAATAAACAAGAATAGTAAGATGTCGTCGATTTTAGGTGAACGTAGTCTGAGACAGGAAAAAATAGGAGCCTGACATGTTTAAACACTAAAAACGATCTTCGAATCAAATTGAAAGTAGTGATGAACGAGGATCTCCAACTTTTTCATGCCATAATTTCTTTTTTCCCTGCTAAAAGTAAATTATTCTGGATTCAAACCTATCGTGAATGAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTGAACTTATTCATGTGTATCACCAGTTTGTCACGGCGCGCAAACGCTCGATCGCACACTTCGCAGACGTACGGCCTTTCGCCGGTATGTATGCGCATGTTGATGGTCAATTTATCCTTGCGTGCTAACCCTTTTCCACACACGGAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCCGGATGCCTTGCTTTTCACTGAAGACGCTTTTGAACGTAAGGCGCTAGAAGTAGCGACTGTTGCAGCTGC ACAGCAGCAGCTGATGACTGATGCAC ] [+] EMBL CNS09IZF [ CACTTACGAAACAGTCAAATAGTAGTTTATT TCCTAGACGGTTACCTCTAGATGGCTTTTAGCGTGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCCCAGTTCACACGGCCACGACAACGAATGGTGTGACTGATCAAAACCGATACTTCCCAATTGTGATTCGTCGGATGCAGTGGGTTGCACATGCAGGCTAGAAGGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTGGTTCTGTTGTTGATGTTGATTTTGAATTGCAATATTGTTTACGACGGTCGTCACTACTGTCTGATGGTTGGTCCGCATTGGTGATGTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTAAAATTAAAGCCAGAAATGGAATGTTGAGTTAAATAAACAAGAATAGTAAGATGTCGTCGATTTTAGGTGAACGTAGTCTGAGACAGGAAAAAATAGGAGCCTGACATGTTTAAACACTAAAAACGATCTTCGAATCAAATTGAAAGTAGTGATGAACGAGGATCTCCAACTTTTTCATGCCATAATTTCTTTTTTCCCTGCTAAAAGTAAATTATTCTGGATTCAAACCTATCGTGAATGAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTGAACTTATTCATGTGTAT AACAGTTTGTCACGGCGCGCAAACGCg ] [+] EMBL CNS08NTL [ TAGTAGTTTATTCTCCTAGACGGTTACCTCTAGATGGCTTTTAGCGTGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCATAGTTCACACGGCCACGACAACGAATGGTGTGACTGATCAAAACCGATACTTCCCAATTGTGATTCGTCGGATGCAGTGGGTTGCACATGCAGGCTAGAAGGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTGGTTCTGTTGTTGATGTTGATTTTGAATTGCAATATTGTTTACGACGGTCGTCACTACTGTCTGATGGTTGGTCTGCATTGGTGATGTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTAAAATTAAAGCCAGAAATGGAATGTAGAGTTAAATAAACAAGAATAGTAAGATGTCGTCGATTTTAGGTGAACGTAGTCTGAGACAGGAAAAAATAGGAGCCTGACATGTTTAAACACTAAAAACGATCTTCGAATCAAATTGAAAGTAGTGATGAACGAGGATCTCCAACTTTTTCATGCCATAATTTCTTTTTTCCCTGCTAAAAGTAAATTATTCTGGATTCAAACCTATCGTGAATGAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTGAACTTATTCATGTGTATCACCAGTTTGTCACGGCGCGCAAACGCTCGATCGCACACTTCGCAGACGTACGGCTTTTCGCCGGTATGTATGCGCATGTGGATGGTCAATTTATCCTTGCGTGCTAACCCTTTTCCACACACGGAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCCGGATGCCTTGCTTTTC ] [-] EMBL BX623392 [ CCACTAAAATTAAAGCCAGAAATGGAATGTAGAGTTGAATAAATAAGAATAGTAAGATGTCGTCGATTTTATGTGAAGGTTGTCTGAGACAGGAAAAAATAGGAGCNTGACATGTTTAAACACTAAAAACGATCTTCGAATCAAATTGAAAGTAGTGATGAACGAGGATCTCCAACTTTTTCATGCCATAATTTCTTTTTTCCNTGCTAAAAGTAAATTATTCTGGATTCAAACCTATCGTGAATGAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTGAACTTATTCATGTGTATCACCAGTTTGTCACGGCGCGCAAACGCTCGATCGCACACTTCGCAGACGTACGGCTTTTCGCCGGTATGTATGCGCATGTGGATGGTCAATTTATCCTTGCGTGCTAACCCTTTTCCACACACGGAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCCGGATGCCTTGCTTTTCACTGAAGACGCTTTTGAACGTAAGGCGCTAGAAGTAGCGACTGTTGCAGCTGCAACAGCAGCAGCTGATGACTGGTGCACTTGCTGCAAGGCCTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCTGGGCCGTACAATTAGCGTTCGACAAACAGGATAACGAGCAAATTGCAAGTCGTGGTAAACGAAAATGAAAGAGAGGACGAGGTTAGATGTAATCTAGCAGTATCGGACAACACGATGTNCCA] consensusID : consensus_9247#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 981 fasta sequence [GTATGTATGCGAATGTGGATGGTAAATTTATCCTTGCGTGCTAACCCTTTTCCACACACGGAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCCGGATGCCTTGCTTTTCACTGAAGACGCTTTTGAACGTAAGGCGCTAGAAGTAGCGACTGTTGCAGCTGCAACAGCAGCAGCTGATGACTGATGCACTTGCTGCAAGGCCTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCAATTCCCTAAACTTTGAAGAACGCGTACTCCACCTTCAAATCCCATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCACTGCTACAACCGCCACCGTCACGGCCAATACTGTTTCCGCTAGTACTTCCTGTAGAAGTAATTCTTGCGGAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAGC-AG-CAGTGTTAATGACCGCATTGGAAAGACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCC-TTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCATCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGCTTCGAATTA-CCAACTAAAAGTCACTGCACTTAACCACGGTCGTGATCACCTCGGCGATC] [-] EMBL CNS09LMM [GTATGTATGCGAATGTGGATGGTAAATTTATCCTTGCGTGCTAACCCTTTTCCACACACGGAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCCGGATGCCTTGCTTTTCACTGAAGACGCTTTTGAACGTAAGGCGCTAGAAGTAGCGACTGTTGCAGCTGCAACAGCAGCAGCTGATGACTGATGCACTTGCTGCAAGGCCTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCAATTCCCTAAACTTTGAAGAACGCGTACTCCACCTTCAAATCCCATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCACTGCTACAACCGCCACCGTCACGGCCAATACTGTTTCCGCTAGTACTTCCTGTAGAAGTAATTCTTGCGGAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAGC AG CAGTGTTAATGACCGCATTGGAAAAACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGC ] [-] EMBL CNS099EF [ AAGTAGCGACTGTTGCAGCTGCAACAGCAGCAGCTGATGACTGATGCACTTGCTGCAAGGCCTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCAATTCCCTAAACTTTGAAGAACGCGTACTCCACCTTCAAATCCCATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCACTGCTACAACCGCCACCGTCACGGCCAATACTGTTTCCGCTAGTACTTCCTGTAGAAGTAATTCTTGCGGAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAGC AG CAGTGTTAATGACCGCATTGGAAAGACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCC TTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCATCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGCTTCGAATTA CCAACTAAAAGTCACTGCACTTAACCACGGTCGGGATC ] [-] EMBL BX605019 [ GCACTTGCTGCAAGGCCTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCAATTCCCTAAACTTTGAAGAACGCGTACTCCACCTTCAAATCCCATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCACTGCTACAACCGCCACCGTCACGGCCAATACTGTTTCCGCTAGTACTTCCTGTAGAAGTAATTCTTGCGGAACTAGTGGCAGTGGTGGTGCTGGTAACCGTTCCAGCAGGAGC AG CAGTGTTAATGACCGCATTGGAAGCACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCC TTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTT ] [-] EMBL CNS09IZE [ gtCCTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCAATTCCCTAAACTTTGAAGAACGCGTACTCCACCTTCAAATCCCATCCCGACGTCATCAGGCACGTTGAAGGTGCTGCTTCCACTGCTACCACTGCTACAACCGCCACCGTCACGGCCAATACTGTTTCCGCTAGTACTTCCTGTAGAAGTAATTCTTGCGGAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAGC AG CAGTGTTAATGACCGCATTGGAAAG CTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCC TTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTGGTGTGCGGGAGTCATCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGCTTCGAATTA CCAACTAAAAGTCACTGCACTTAACCACGGTCtttt ] [-] EMBL AL930574 [ TCCAGCAGGAGCAAGCCAGTGTTAATGACCGCATTGGAAGCACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCC TTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCATCTTGTCAGCGATGCATAAATTTCAATCAT AGAAGCTTCGAATTACCCAACT AAAGTCACTGCAC TAACC C GTCATGATNACCTCGGCGATC] [-] EMBL CNS08NTK [ AGC AG CAGTGTTAATGACCGCATTGGAAAGACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCCTTTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCATCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGCTTCGAATTA CCAAC ] consensusID : consensus_9247#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 723 fasta sequence [GACTGATGCACTTGCTGCAAGGACTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCTTCAAATCCCCATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCACTGCTACAACCCGCCACCGTCACGGCCAATACTGTTTCCGCTAGTACTTCCTGTAGAAGTAATTCTTGCGGAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAGCAGCAGTGTTAATGACCGCATTGGAAGCACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCCTTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCATCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGCCGGACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL BM620262 [GACTGATGCACTTGCTGCAAGGACTTTAGTCGCGTTGCCGGGTGCATAGAACCACCCTCGGCCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGTATGTTGGGTGGAATCTCCGGTGACCTTCAAATCCCCATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCACTGCTACAACCCGCCACCGTCACGGCCAATACTGTTTCCGCTAGTACTTCCTGTAGAAGTAATTCTTGCGGAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAGCAGCAGTGTTAATGACCGCATTGGAAGCACTTGCGTGCGTACCGGCGTTAATTTGCGGCACCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCCCCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCCTTGCTGTAGAAGTTGATGAGGGTCGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGAGATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAGCCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCATCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGCCGGACGCGTGGGCGGACGCGTGGGCGG] consensusID : consensus_9247#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 688 fasta sequence [CCGGTAAGACATAGATTCATGACCGTGGTTAAGTGCAGTGACTTTTAGTTGGTAATTCGAAGCTTCTTCTATGATTGAAATTTATGCATCGCTGACAAGATGACTCCCGCACAAAAAAATGCCTATCTCGAAGCTCATATGGCCGTACAACAGCAGATGGCTCAAGCTGCATTGCAGCTTCAACATCAGCATCACCAACAACAACTGCAACAGCAGCATCTCCAGCAACAACATAGCCTTAGCTATAATCGAGCTGCAAAGAAAACCAAAATCAGCCACGACCCTCATCAACTTCTACAGCAAGGATCGCATCAATCACAGCAGCATCAGCATCAACCGGGGAGTTCGCCCTCTGCCCATCCGAATCCGACTGTCAGCCATTACATAAACACGATAAAGGTGCCGCAAATTAACGCCGGTACGCACGCAAGTGCTTCCAATGCGGTCATTAACACTGCTGCTCCTGCTGGAACGGTTACCAGTACCACCACTGCCACTAGTTCCGCAAGAATTACTTCTACAGGAAGTACTAGCGGAAACAGTATTGGCCGTGACGGTGGCGGTTGTAGCAGTGGTAGCAGTGGAAGCAGCACCTTCACCGTGCCTGATGACGTCGGGATGGGATTTGAAGGTGGAGTACGCGTTCTTCAAAGTTTAAGGAATTGGTACATCGTGTTGTCCGATACTG] [+] EMBL BM577934 [CCGGTAAGACATAGATTCATGACCGTGGTTAAGTGCAGTGACTTTTAGTTGGTAATTCGAAGCTTCTTCTATGATTGAAATTTATGCATCGCTGACAAGATGACTCCCGCACAAAAAAATGCCTATCTCGAAGCTCATATGGCCGTACAACAGCAGATGGCTCAAGCTGCATTGCAGCTTCAACATCAGCATCACCAACAACAACTGCAACAGCAGCATCTCCAGCAACAACATAGCCTTAGCTATAATCGAGCTGCAAAGAAAACCAAAATCAGCCACGACCCTCATCAACTTCTACAGCAAGGATCGCATCAATCACAGCAGCATCAGCATCAACCGGGGAGTTCGCCCTCTGCCCATCCGAATCCGACTGTCAGCCATTACATAAACACGATAAAGGTGCCGCAAATTAACGCCGGTACGCACGCAAGTGCTTCCAATGCGGTCATTAACACTGCTGCTCCTGCTGGAACGGTTACCAGTACCACCACTGCCACTAGTTCCGCAAGAATTACTTCTACAGGAAGTACTAGCGGAAACAGTATTGGCCGTGACGGTGGCGGTTGTAGCAGTGGTAGCAGTGGAAGCAGCACCTTCACCGTGCCTGATGACGTCGGGATGGGATTTGAAGGTGGAGTACGCGTTCTTCAAAGTTTAAGGAATTGGTACATCGTGTTGTCCGATACTG] [+] EMBL BX612640 [ CTTCTATGATTGAAATTTATGCATCGCTGACAAGATGACTCCCGCACAAAAAAATGCCTATCTCGAAGCTCATATGGCCGTACAACAGCAGATGGCTCAAGCTGCATTGCAGCTTCAACATCAGCATCACCAACAACAACTGCAACAGCAGCATCTCCAGCAACAACATAGCCTTAGCTATAATCGAGCTGCAAAGAAAACCAAAATCAGCCACGACCCTCATCAACTTCTACAGCAAGGATCGCATCAATCACAGCAGCATCAGCATCAACCGGGGAGTTCGCCCTCTGCCCATCCGAATCCGACTGTCAGCCATTACATAAACACGATAAAGGTGCCGCAAATTAACGCCGGTACGCACGCAAGTGCTTCCAATGCGGTCATTAACACTGCTGCTCCTGCTGGAACGGTTACCAGCACCACCACTGCCACTAGTTCCGCAAGAATTACTTCTACAGGAAGTACTAGCGGAAACAGTATTGGCCGTGACGGTGGCGGTTGTAGCAGTGGTAGCAGTGGAAGCAGCACCTTCACCGTGCCTGATGACGTCGGGATGGGATTTGAAG ] consensusID : consensus_9247#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 511 fasta sequence [CGACCCACGCGTCCGCGGACGCGTGGGTGCAGTGACTTTTAGTTGGTAATTCGAAGCTTCTTCTATGATTGAAATTGTAAGAAAATATTTTGTTACGTTTCGCTTTTCTGAATATTTGCTTATTATGTCCCTGATGGAAACATTATACGATATGCATCGCTGACAAGATGACTCCCGCACAAAAAAATGCCTATCTCGAAGCTCATATGGCCGTACAACAGCAGATGGCTCAAGCTGCATTGCAGCTTCAACATCAGCATCACCAACAACAACTGCAACAGCAGCATCTCCAGCAACAACATAGCCTTAGCTATAATCGAGCTGCAAAGAAAACCAAAATCAGCCACGACCCTCATCAACTTCTACAGCAAGGATCGCATCAATCACAGCAGCATCAGCATCAACCGGGGAGTTCGCCCTCTGCCCATCCGAATCCGACTGTCAGCCATTACATAAACACGATAAAGGTGCCGCAAATTAACGCCGGTACGCACGCAAGTGCTTCCAATGC] [+] EMBL BM626805 [CGACCCACGCGTCCGCGGACGCGTGGGTGCAGTGACTTTTAGTTGGTAATTCGAAGCTTCTTCTATGATTGAAATTGTAAGAAAATATTTTGTTACGTTTCGCTTTTCTGAATATTTGCTTATTATGTCCCTGATGGAAACATTATACGATATGCATCGCTGACAAGATGACTCCCGCACAAAAAAATGCCTATCTCGAAGCTCATATGGCCGTACAACAGCAGATGGCTCAAGCTGCATTGCAGCTTCAACATCAGCATCACCAACAACAACTGCAACAGCAGCATCTCCAGCAACAACATAGCCTTAGCTATAATCGAGCTGCAAAGAAAACCAAAATCAGCCACGACCCTCATCAACTTCTACAGCAAGGATCGCATCAATCACAGCAGCATCAGCATCAACCGGGGAGTTCGCCCTCTGCCCATCCGAATCCGACTGTCAGCCATTACATAAACACGATAAAGGTGCCGCAAATTAACGCCGGTACGCACGCAAGTGCTTCCAATGC] consensusID : consensus_9247#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence [TCAAATAGTAGTTTATTTCCTAGACGGTTACCTCTAGATGGCTTTTAGCGTGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCATAGTTCACACGGCCACGACAACGAATGGTGTGACTGATCAAAACCGATACTTCCCAATTGTGATTCGTCGGATGCAGTGGGTTGCACATGCAGGCTAGAAGGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTGGTTCTGTTGTTGATGTTGATTTTGAATTGCAATATTGTTTACGACGGTCGTCACTACTGTCTGATGGTTGGTCTGCATTGGTGATGTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTATCGTGAATTAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTTAACTTATTCATGTTT] [+] EMBL CNS09LMN [TCAAATAGTAGTTTATTTCCTAGACGGTTACCTCTAGATGGCTTTTAGCGTGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCATAGTTCACACGGCCACGACAACGAATGGTGTGACTGATCAAAACCGATACTTCCCAATTGTGATTCGTCGGATGCAGTGGGTTGCACATGCAGGCTAGAAGGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTGGTTCTGTTGTTGATGTTGATTTTGAATTGCAATATTGTTTACGACGGTCGTCACTACTGTCTGATGGTTGGTCTGCATTGGTGATGTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTATCGTGAATTAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTTAACTTATTCATGTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9247#1 GTATGTATGCGAATGTGGATGGTAAATTTATCCTTGCGTGCTAACCCTTTTCCACACACG 60 consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 ------------------------------------------------------------ consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 GAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCCGGATGCCTTG 120 consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 ------------------------------------------------------------ consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 CTTTTCACTGAAGACGCTTTTGAACGTAAGGCGCTAGAAGTAGCGACTGTTGCAGCTGCA 180 consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 -----------------------------------------------TATTTTCTACACT 13 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ---------------------------------------CGACCCACGCGTCCGCGGACG 21 consensus_9247#1 ACAGCAGCAGCTGATGACTGATGCACTTGCTGCAAGG---CCTTTAGTCGCGTTGCCGGG 237 consensus_9247#2 ---------------GACTGATGCACTTGCTGCAAGG---ACTTTAGTCGCGTTGCCGGG 42 consensus_9247#0 TACGCCACCGTCAAATAGTAGTTTATTTCCTAGACGGTTACCTCTAGATGGCTTTTAGCG 73 consensus_9247#5 ----------TCAAATAGTAGTTTATTTCCTAGACGGTTACCTCTAGATGGCTTTTAGCG 50 consensus_9247#3 --------------------------------------CCGGTAAGACATAGATT-CATG 21 consensus_9247#4 CGTGGGTGCAGTGACTTTTAGTTGGTAATTCGAAGCTTCTTCTATGATTGAAATTGTAAG 81 * * * consensus_9247#1 TGCATAGA--ACCACCCTCGGC-ATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGT 294 consensus_9247#2 TGCATAGA--ACCACCCTCGGCCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGCGGT 100 consensus_9247#0 TGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCATAGTTCACACGGCCACG-- 131 consensus_9247#5 TGCACAGTCCATTCTTCTCGGGAACCAAACATTCGGCCGCATAGTTCACACGGCCACG-- 108 consensus_9247#3 ACCGTGGTTAAGTGCAGTGACTTTTAGTTGGTAATTCGAAGCTTCTTCTATGATTGAAAT 81 consensus_9247#4 AAAATATTTTGTTACGTTTCGCTTTTCTGAATATTTGCTTATTATGTCCCTGATGGAAAC 141 * * consensus_9247#1 ATGT--TGGGTGGAATCTCCGGTGACCAATTCCCTAAACTTTGAAGAACGCGTACTCCAC 352 consensus_9247#2 ATGT--TGGGTGGAATCTCCGGTGACC--------------------------------- 125 consensus_9247#0 ACAA--CGAATGGTGTGACTGATCAAAA-------------------------------C 158 consensus_9247#5 ACAA--CGAATGGTGTGACTGATCAAAA-------------------------------C 135 consensus_9247#3 TT--------ATGCATCGCTGACAAGATGACTCCCGCACAAAAAAATGC-------CTAT 126 consensus_9247#4 ATTATACGATATGCATCGCTGACAAGATGACTCCCGCACAAAAAAATGC-------CTAT 194 * * * * * consensus_9247#1 CTTCAAATCCC-ATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCA 411 consensus_9247#2 -TTCAAATCCCCATCCCGACGTCATCAGGCACGGTGAAGGTGCTGCTTCCACTGCTACCA 184 consensus_9247#0 CGATACTTCCCAATTGTGAT-TCGTCGGATGCAGTG--GGTTGCACATGCAG-GCTAGAA 214 consensus_9247#5 CGATACTTCCCAATTGTGAT-TCGTCGGATGCAGTG--GGTTGCACATGCAG-GCTAGAA 191 consensus_9247#3 CTCGAAGCTCATATGGCCGTACAACAGCAGATGGCTCAAGCTGCAT-TGCAGCTTCAACA 185 consensus_9247#4 CTCGAAGCTCATATGGCCGTACAACAGCAGATGGCTCAAGCTGCAT-TGCAGCTTCAACA 253 * * ** * * * ** * * consensus_9247#1 CTGCTACAACC-GCCACCGTCACGGCCAATACTGTTTCCGCTA----GTACTTCCTGTAG 466 consensus_9247#2 CTGCTACAACCCGCCACCGTCACGGCCAATACTGTTTCCGCTA----GTACTTCCTGTAG 240 consensus_9247#0 -----GGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTG----GTTCTGT-TGTTG 264 consensus_9247#5 -----GGAACTAGTTGTTGTTGAGACAGCTGATTATTCGACTG----GTTCTGT-TGTTG 241 consensus_9247#3 TCAGCATCACCAACAACAACTGCAACAGCAGCATCTCCAGCAACAACATAGCCTTAGCTA 245 consensus_9247#4 TCAGCATCACCAACAACAACTGCAACAGCAGCATCTCCAGCAACAACATAGCCTTAGCTA 313 ** * * * * * * consensus_9247#1 AAGTAATTCT-TGCG--GAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAG 523 consensus_9247#2 AAGTAATTCT-TGCG--GAACTAGTGGCAGTGGTGGTACTGGTAACCGTTCCAGCAGGAG 297 consensus_9247#0 ATGTTGATTT-TGAATTGCAATATTGTTTACGACGGTCGTCACTACTGT--CTGATGGTT 321 consensus_9247#5 ATGTTGATTT-TGAATTGCAATATTGTTTACGACGGTCGTCACTACTGT--CTGATGGTT 298 consensus_9247#3 TAATCGAGCTGCAAAGAAAACCAAAATCAGCCACGACCCTCATCAACTT--CTACAGCAA 303 consensus_9247#4 TAATCGAGCTGCAAAGAAAACCAAAATCAGCCACGACCCTCATCAACTT--CTACAGCAA 371 * * * * * * * * * * consensus_9247#1 CAGCAGTGTTAATGACCGCATTGGAAAGACTTGCGTGCGTACCGGCGTTAATTTGCGGCA 583 consensus_9247#2 CAGCAGTGTTAATGACCGCATTGGAAGCACTTGCGTGCGTACCGGCGTTAATTTGCGGCA 357 consensus_9247#0 GGTCTGCATTGGTGAT-GTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTAAAATTA 380 consensus_9247#5 GGTCTGCATTGGTGAT-GTAATGTCTTCTCCTTTAAACTCATCCTTTTCCACTATCGT-G 356 consensus_9247#3 GGATCGCATCAATCACAGCAGCATCAGCATCAACCGGGGAGTTCGCCCTCTGCCCATCCG 363 consensus_9247#4 GGATCGCATCAATCACAGCAGCATCAGCATCAACCGGGGAGTTCGCCCTCTGCCCATCCG 431 * * * * * * consensus_9247#1 CCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCC 643 consensus_9247#2 CCTTTATCGTGTTTATGTAATGGCTGACAGTCGGATTCGGATGGGCAGAGGGCGAACTCC 417 consensus_9247#0 AAGCCAGAAATGGAATGTAGAGTTAAATAAACAAGAATAGTAAGATGTCGTCGATTTTAG 440 consensus_9247#5 AATTAACGATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGG-GTTATGTGTTTTAA 415 consensus_9247#3 AATCCGACTGTCAGCCATTACATAAACACGATAAAGGTGCCGCAAATTAACGCCGGTACG 423 consensus_9247#4 AATCCGACTGTCAGCCATTACATAAACACGATAAAGGTGCCGCAAATTAACGCCGGTACG 491 consensus_9247#1 CCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCCTTGCTGTAGAAGTTGATGAGGGT 703 consensus_9247#2 CCGGTTGATGCTGATGCTGCTGTGATTGATGCGATCCTTGCTGTAGAAGTTGATGAGGGT 477 consensus_9247#0 GTGAACGTAGTC--TGAGACAGGAAAAAATAGGAGCCTGACATGTTTAAACACTAAAAAC 498 consensus_9247#5 CTTATTCATGTT--T--------------------------------------------- 428 consensus_9247#3 CACGCAAGTGCTTCCAATGCGGTCATTAACACTGCTGCTCCTGCTGGAACGGTTACCAGT 483 consensus_9247#4 CACGCAAGTGCTTCCAATGC---------------------------------------- 511 * consensus_9247#1 CGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGA 763 consensus_9247#2 CGTGGCTGATTTTGGTTTTCTTTGCAGCTCGATTATAGCTAAGGCTATGTTGTTGCTGGA 537 consensus_9247#0 GATCTTCGAATCAAATTGAAAGTAGTGATGAACGAGGATCTCCAACTTTTTCATGCCATA 558 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ACCACCACTGCCACTAGTTCCGCAAGAATTACTTCTACAGGAAGTACTAGCGGAAACAGT 543 consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 GATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAG 823 consensus_9247#2 GATGCTGCTGTTGCAGTTGTTGTTGGTGATGCTGATGTTGAAGCTGCAATGCAGCTTGAG 597 consensus_9247#0 ATTTCTTTTTTCCCTGCTAAAAGTAAATTATTCTGGATTCAAACCTATCGTGAATGAACG 618 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ATTGGCCGTGACGGTGGCGGTTGTAGCAGTGGTAGCAGTGGAAGCAGCACCTTCACCGTG 603 consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 CCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCA 883 consensus_9247#2 CCATCTGCTGTTGTACGGCCATATGAGCTTCGAGATAGGCATTTTTTTGTGCGGGAGTCA 657 consensus_9247#0 ATTCTGACGCTTGCCGAGTGGAGCTATATTCGTTGGGGTTATGTGTTTGAACTTATTCAT 678 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 CCTGATGACGTCGGGATGGGATTTGAAGGTGGAGTACGCGTTCTTCAAAGTTTAAGGAAT 663 consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 TCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGCTTCGAATTACCAACTAAAAGT 943 consensus_9247#2 TCTTGTCAGCGATGCATAAATTTCAATCATAGAAGAAGC--CGGACGCGTGGGCGGACGC 715 consensus_9247#0 GTGTATCACCAGTTTGTCACGGCGCGCAAACGCTCGATCGCACACTTCGCAGACGTACGG 738 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 TGGTACATCGTGTTGTCCGATACTG----------------------------------- 688 consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 CACTGCACTTAACCACGGTCGTGATCACCTCGGCGATC---------------------- 981 consensus_9247#2 GTGGGCGG---------------------------------------------------- 723 consensus_9247#0 CTTTTCGCCGGTATGTATGCGCATGTGGATGGTCAATTTATCCTTGCGTGCTAACCCTTT 798 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 ------------------------------------------------------------ consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 TCCACACACGGAGCACTCGAATACCGGTTTAGACGAGGCAGTAGGGTCCGCTGTCGTCCC 858 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 ------------------------------------------------------------ consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 GGATGCCTTGCTTTTCACTGAAGACGCTTTTGAACGTAAGGCGCTAGAAGTAGCGACTGT 918 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 ------------------------------------------------------------ consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 TGCAGCTGCACAGCAGCAGCTGATGACTGATGCACTTGCTGCAAGGCCTTTAGTCGCGTT 978 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 ------------------------------------------------------------ consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 GCCGGGTGCATAGAACCACCCTCGGCATACGGTTCCGTGAATGGTATCAGGTTCGGTCGC 1038 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 ------------------------------------------------------------ consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 GGTATGTTGGGTGGAATCTCCGGTGACCTGGGCCGTACAATTAGCGTTCGACAAACAGGA 1098 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 ------------------------------------------------------------ consensus_9247#2 ------------------------------------------------------------ consensus_9247#0 TAACGAGCAAATTGCAAGTCGTGGTAAACGAAAATGAAAGAGAGGACGAGGTTAGATGTA 1158 consensus_9247#5 ------------------------------------------------------------ consensus_9247#3 ------------------------------------------------------------ consensus_9247#4 ------------------------------------------------------------ consensus_9247#1 ------------------------------- consensus_9247#2 ------------------------------- consensus_9247#0 ATCTAGCAGTATCGGACAACACGATGTNCCA 1189 consensus_9247#5 ------------------------------- consensus_9247#3 ------------------------------- consensus_9247#4 ------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||