These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9253#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 887 fasta sequence [CGCTCGCGCACATGTGGCCTTTTTTTTATTTTTTTTTCCAACAGTTTTAAACACGATTTTATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG-ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATATGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTAAAATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCCTTT] [-] EMBL CNS09KHI [CGCTCGCGCACATGTGGCCTTTTTTTTATTTTTTTTTCCAACAGTTTTAAACACGATTTTATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTC CCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATATGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGT ] [+] EMBL CNS09KHJ [ TTATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGTATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGA TGACTGTAGAACCGATTTACTCCGTATTGATTTGGATATGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTAAAATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCCTTT] [-] EMBL BM593384 [ GCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCgg ] [-] EMBL BM590483 [ GGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCG ATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACcgg ] consensusID : consensus_9253#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 780 fasta sequence [CTGTTTAACATCTCTACGGTTTCCAGCAAGCTTATCGATGTCCTTAACGATACTCTTAGGCGAACGTGGTCGGTGCGTAGCGGTCCACCGGCTGT-CCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCAT-TTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGAT-CCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTAT-CCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG-GCTAGCGCGGGGAAAGTTGTGAAATTCGACATTAAAACAAAATGGATTGTTTATGTTCGCCGTTCGACGCCGGGCAGTTTTCACTGTTTACTCGAAAGACCGGTCACTCCAGTTCGCGTTCTGCGTGCGTGTGTGTGTACGG] [-] EMBL BM628992 [CTGTTTAACATCTCTACGGTTTCCAGCAAGCTTATCGATGTCCTTAACGATACTCTTAGGCGAACGTGGTCGGTGCGTAGCGGTCCACCGGCTGTCCCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCAT TTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGATCCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG GCTAGCGCGG ] [-] EMBL BM644773 [ cgACGTGGTCGGTGCGTAGCGGTCCACCGGCTGT CCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCAT TTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGAT CCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTAT CCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG GCTAGC CGG ] [-] EMBL AL930594 [ TGT CCGTCCTTGTTTACCAGGAACTTGGAGAAATNCCATGTTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGAT CCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCA TTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTAT CCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTT GATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATT TGACCTCGGGCG ] [-] EMBL BM586196 [ TCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTACCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTG GCTAGCGTACGGAAAGTTGTGAAATTCGACATTAAAACAAAATGGATTGTTTATGTTCGCCGTTCGACGCCGGGCAGTTTTCACTGTTTACTCGAAAGACCGGTCACTCCAGTTCGCGTTCTGCGTGCGTGTGTGTGTACGG] consensusID : consensus_9253#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 743 fasta sequence [CTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATGCTATTAATACACCCACTACGAACAGAAGGACACTTTTCGTCGAAAACAT] [-] EMBL BX625235 [CTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGCGACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTTTTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATGCTATTAATACACCCACTACGAACAGAAGGACACTTTTCGTCGAAAACAT] [-] EMBL BM631152 [ TAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTcgg ] consensusID : consensus_9253#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence [CTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTGAAATTCGACATTAAAACAAAACGG] [-] EMBL BM575298 [CTCCCCCTAGCCCAGCAGCTTATCAATGTCCTTCACAATGCTGCTGGGCGACGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAAACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTGATTTGGATACGAGAACGCACAATACTGAAATCGCCCGAGCGTATTACGTCCGATTGTGGCTAGCGTACGGAAAGTTGTGAAATTCGACATTAAAACAAAACGG] consensusID : consensus_9253#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 664 fasta sequence [GTCCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCATTTNATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATAAATGAACCACGGGCAAAGAAGAAATATGGACTGCGTGAATGGAGGGGCAATCGGACCATAAGCGATATGCTCTTATCTGCAAATATTGAATGATGGGAAAACGTGCACAATTGCTCTAGCTTCACACGCGCGGCGCGCCGGTAACGCAGCACCAACTATCGTGACCACAAACCGG] [-] EMBL BX624269 [GTCCGTCCTTGTTTACCAGGAACTTGGAGAAATTCCATTTNATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAATATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATAAATGAACCA ] [-] EMBL BM627367 [ TTGTGCTTGAGATATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTACTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTTGGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCTGCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGTTGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAATCCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGGTTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATTAATGAACCACGGGCAAAGAAGAAATATGGACTGCGTGAATGGAGGGGCAATCGGACCATAAGCGATATGCTCTTATCTGCAAATATTGAATGATGGGAAAACGTGCACAATTGCTCTAGCTTCACACGCGCGGCGCGCCGG ] [-] EMBL BM609090 [ AAGCGATATGCTCTTATCTGTAAATATTGAATGATGGGAAAACGTGCACAATTGCTCTAGCTCCACACGCGCGGCGCGCGGATAACGCAGCACCAACTATCGTGACCACAAACCGG] consensusID : consensus_9253#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 211 fasta sequence [AAGCGGATCCGTAGTACAAATACACGAAGCACAAGCAGGGGGGAATACCGGGTGATCCAACAAAAAGGAATAGCACCAAGTACCCGGTAAACAAGGACGGACAGCCGGGGGACCGCTACGCACCGACCACGTCGCCCAAGAGTAACGCAAAGGATACCGAAAAGCTGCCGGAAGCGTAGAGATGCAAACAGGAAAAGGGCAAACGAACCAA] [+] EMBL BX613271 [AAGCGGATCCGTAGTACAAATACACGAAGCACAAGCAGGGGGGAATACCGGGTGATCCAACAAAAAGGAATAGCACCAAGTACCCGGTAAACAAGGACGGACAGCCGGGGGACCGCTACGCACCGACCACGTCGCCCAAGAGTAACGCAAAGGATACCGAAAAGCTGCCGGAAGCGTAGAGATGCAAACAGGAAAAGGGCAAACGAACCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9253#0 CGCTCGCGCACATGTGGCCTTTTTTTTATTTTTTTTTCCAACAGTTTTAAACACGATTTT 60 consensus_9253#2 ------------------------------------------------------------ consensus_9253#1 ------------------------------------------------------------ consensus_9253#3 ------------------------------------------------------------ consensus_9253#4 ------------------------------------------------------------ consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 ATTGATTCTCTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGC 120 consensus_9253#2 ---------CTCAATTCATGATTCATAAACAAGCAAATTCAATCAAGCAAGTGCATTTGC 51 consensus_9253#1 ------------------------------------------------------------ consensus_9253#3 ------------------------------------------------------------ consensus_9253#4 ------------------------------------------------------------ consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 GACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTT 180 consensus_9253#2 GACCTTAACAACTACCATTACTGTCCCCTGACTGAGCCCCCTTGCCAAACTGCAATACTT 111 consensus_9253#1 ------------------------------------------------------------ consensus_9253#3 ------------------------------------------------------------ consensus_9253#4 ------------------------------------------------------------ consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 TTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCA-GCTTATCAATGTCCTTCACAATGCT 239 consensus_9253#2 TTTCGGCTTCCTGTTTGCTCCCCCTAGCCCAGCA-GCTTATCAATGTCCTTCACAATGCT 170 consensus_9253#1 ------CTGTTTAACATCTCTACGGTTTCCAGCAAGCTTATCGATGTCCTTAACGATACT 54 consensus_9253#3 -----------------CTCCCCCTAGCCCAGCA-GCTTATCAATGTCCTTCACAATGCT 42 consensus_9253#4 ------------------------------------------------------------ consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 GCTGGGCGA-CGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAA 298 consensus_9253#2 GCTGGGCGA-CGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAA 229 consensus_9253#1 CTTAGGCGAACGTGGTCGGTGCGTAGCGGTCCACCGGCTGTCCGTCCTTGTTTACCAGGA 114 consensus_9253#3 GCTGGGCGA-CGTTGTAGGCGCATAGCGATCCACCGGCTGACCGTCCTTGTTTACCAAAA 101 consensus_9253#4 ---------------------------------------GTCCGTCCTTGTTTACCAGGA 21 consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 ACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGAT 358 consensus_9253#2 ACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGAT 289 consensus_9253#1 ACTTGGAGAAATTCCATTTAATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAAT 174 consensus_9253#3 ACTTGGCAAAGTTCCACTTGATCGAATCACCCAAAGTGCCACCCTGCTTGTGCTTGAGAT 161 consensus_9253#4 ACTTGGAGAAATTCCATTTNATTGAATCACCCAGAATTCCACCCTGCTTGTGCTTCAAAT 81 consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 ATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTA 418 consensus_9253#2 ATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTA 349 consensus_9253#1 ATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTA 234 consensus_9253#3 ATTTGTAGAGCGGATGTGCGCCGTCACCGTTTACATCGATCTTAGCGAAAACGTCTCCTA 221 consensus_9253#4 ATTTGTACAACGGATCCGCATCGTCTCCGTTCACCTTAATCTTAGCGAAAACGTCTCCTA 141 consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 478 consensus_9253#2 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 409 consensus_9253#1 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 294 consensus_9253#3 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 281 consensus_9253#4 CTTCCGCTTTGGCCGAGCGAAGATGACACACCATTTCCTCTCCGTCGCCTTCCGGCATTT 201 consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 GGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCT 538 consensus_9253#2 GGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCT 469 consensus_9253#1 GGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCT 354 consensus_9253#3 GGCCACCGAACTGATTGCAGGGGAAGGACAGGATTTTGAAATCCTTATCCGCGTACTTCT 341 consensus_9253#4 GGCCACCGAACTGATTGCAGGGGAAGGACAAAATTTTGAAATCCTTATCCGCGTACTTCT 261 consensus_9253#5 --------------------------------------------------AAGCGGATCC 10 * ** consensus_9253#0 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 598 consensus_9253#2 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 529 consensus_9253#1 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 414 consensus_9253#3 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 401 consensus_9253#4 GCGATAGCTCGGTCAGCTCGGCATAATTGCCCTTGGTTAGCCCGCACTGGGAGGCAATGT 321 consensus_9253#5 GTAGTA--CAAATACACGAAGCACAAGCA-----GGGGGGAATACCGGGTGATCCAACAA 63 * ** * * *** ** ** * * * ** *** consensus_9253#0 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 658 consensus_9253#2 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 589 consensus_9253#1 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 474 consensus_9253#3 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 461 consensus_9253#4 TGACGATTAGCAGCACCTTGCCACGGTACTTCTCCAGGCTGACGTCGGCCCCTTGCGAAT 381 consensus_9253#5 AAAGGAATAGCACCAAGTACCCGGTAAACAAGGACGGACAGCCGGGGGACCGCTACGCAC 123 * ** ***** ** * ** ** * * * * ** ** ** * ** * consensus_9253#0 CCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGG 718 consensus_9253#2 CCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGG 649 consensus_9253#1 CCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGG 534 consensus_9253#3 CCTTCACCGTGAAGTCGTACACCGATTTAGCGTTCTTGTAGTCCTCCATCGTGCCGTCGG 521 consensus_9253#4 CCTTCACCGTGAAGTCGTACACCGATTTAGCATTCTTGTAGTCTTCCATCGTGCCGTCGG 441 consensus_9253#5 CGACCACGTCGCCCAAGAGTAACG-CAAAGGATACCGAAAAGCTGCCG--GAAGCGTAGA 180 * *** * * * ** ** * * * * ** * *** * consensus_9253#0 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTG--ATTTGGATATGA 776 consensus_9253#2 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTAT---------GCTATTA 700 consensus_9253#1 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTG--ATTTGGATACGA 592 consensus_9253#3 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTATTG--ATTTGGATACGA 579 consensus_9253#4 TTTGCGTTGTCGTAGACTGACTGTAGAACCGATTTACTCCGTACTATAAATGAACCACGG 501 consensus_9253#5 GATGCAA-ACAGGAAAAGGGCAAACGAACCAA---------------------------- 211 *** * * * * * ***** * consensus_9253#0 GAACGCACAATACTGAAATCGCCCGAGCGTATTAC--GTCCGATTGTGGCTAGCGTACGG 834 consensus_9253#2 ATACACCCACTACGAA---CAGAAGGACACTTTTC--GTC-GAAAACAT----------- 743 consensus_9253#1 GAACGCACAATACTGAAATCGCCCGAGCGTATTAC--GTCCGATTGTGGCTAGCGCGGGG 650 consensus_9253#3 GAACGCACAATACTGAAATCGCCCGAGCGTATTAC--GTCCGATTGTGGCTAGCGTACGG 637 consensus_9253#4 GCAAAGAAGAAATATGGACTGCGTGAATGGAGGGGCAATCGGACCATAAGCGATATGCTC 561 consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 AAAGTTGTAAAATTC--CAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCCTTT----- 887 consensus_9253#2 ------------------------------------------------------------ consensus_9253#1 AAAGTTGTGAAATTCGACATTAAAACAAAATGGATTGTTTATGTTCGCCGTTCGACGCCG 710 consensus_9253#3 AAAGTTGTGAAATTCGACATTAAAACAAAACGG--------------------------- 670 consensus_9253#4 TTATCTGCAAATATTGA-ATGATGGGAAAACGTGCACAATTGCTCTAGCTTCACACGCGC 620 consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 ------------------------------------------------------------ consensus_9253#2 ------------------------------------------------------------ consensus_9253#1 GGCAGTTTTCACTGTTTACTCGAAAGACCGGTCACTCCAGTTCGCGTTCTGCGTGCGTGT 770 consensus_9253#3 ------------------------------------------------------------ consensus_9253#4 GGCGCGCCGGTAACGCAGCACCAACTATCGTGACCACAAACCGG---------------- 664 consensus_9253#5 ------------------------------------------------------------ consensus_9253#0 ---------- consensus_9253#2 ---------- consensus_9253#1 GTGTGTACGG 780 consensus_9253#3 ---------- consensus_9253#4 ---------- consensus_9253#5 ---------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||