These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9255#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1495 fasta sequence [CCGAAACGGATCGGATCAACCGTTAACCGTACGTGCCTCATTTCGTGTACCGTGTGTGCGTTCGTGTGTGTTGTCCCCCGTCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAATTTGACAGCGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACAACCCCCACCCCCACCCCCCGATTCTAGATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGTCACCTGCCTTGAGATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCAGTCGTCTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGCCTTAAAGTTTATCAACCCGATAGCCAACTACACCGGCAACTACACGTGCCAGGTGCAGACGTACCAGAGCGTGCAGTCGCGGACGGCCCACCTGCAGATAATCGTGCCCGAGACGGACTTCTCGCTCGGCTTCCAGCGGGAAACGAACGGCAGCACGGTGGTGTTCTGCAATGTAGGTGAAATTTTCCCCCGACCGGAAGTTTCGCTGCTCATCGATAACGAGAAGGTGCCCGACGCGGTGGAAACGGAACAGGTGCAGGAGTACACCAACTACTACAACATGACGGTACAGTACATCCTGCCCGACCAGAACAAGGACATGGAGCTGGAGTGTGAGGTGACGATACCGGGGACCGACTACAAGCTGCGCACCAGCATGCCCTATCTGGGTGCCGCCTTCCGGGCGAATGCTGCCACGTTGCAGGTCTTCCTCTGTACCTTCCTGACAGTCACACTGGCCCGCATGCTGACCCTGTTCTAGGGACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTGCTCCACAGAAAATGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGC--TCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCCACTTCAGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTTGTGATCGCTGNTTTCTTGTGTACACCAC] [+] EMBL BM601776 [CCGAAACGGATCGGATCAACCGTTAACCGTACGTGCCTCATTTCGTGTACCGTGTGTGCGTTCGTGTGTGTTGTCCCCCGTCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAATTTGACAGCGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACAACCCCCACCCCCACCCCCCGATTCTAGATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGTCACCTGCCTTGAGATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCAGTCGTCTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGGCTTAAAGTTTA ] [+] EMBL BX622017 [ CGTTAACCGTACGTGCCTCATTTCGTGTACCGTGTGTGCGTTCGTGTGTGTTGTCCCCCGTCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAATTTGACAGCGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACAACCCCCACCCCCACCCCCCGATTCTAGATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGTCACCTGCCTTGAGATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGG ] [+] EMBL BM604169 [ ccgCCCGTCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAATTTGACAGCGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACAACCCCCACCCCCACCCCCCGATTCTAGATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGTCACCTGCCTTGAGATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCAGTCGTCTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCGGAGTCGGATGATCGGCTCCACAAG ] [+] EMBL BM611975 [ cCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACAACCCCCACCCCCACCCCCCGATTCTAGATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGTCACCTGCCTTGAGATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCAGTCGTCTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGCCTTAAAGTTTATCAACCCGATAGCCAACTACACCGGCAACTACACGTGCCAGGTGCAGACGTACCAGAGCGTGCAGTCGCGGACGGCCCACCTGCAGATAATCGTG ] [+] EMBL BX603268 [ CGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCAGTCGTCTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGCCTTAAAGTTTATCAACCCGATAGCCAACTACACCGGCAACTACACGTGCCAGGTGCAGACGTACCAGAGCGTGCAGTCGCGGACGGCCCACCTGCAGATAATCGTGCCCGAGACGGACTTCTCGCTCGGCTTCCAGCGGGAAACGAACGGCAGCACGGTGGTGTTCTGCAATGTAGGTGAAATTTTCCCCCGACCGGAAGTTTCGCTGCTCATCGATAACGAGAAGGTGCCCGACGCGGTGGAAACGGAACAGGTGCAGGAGTACACCAACTACTACAACATGACGGTACAGTACATCCTGCCCGACCAGAACAAGGACATGGAGCTGGAGTGTGAAGTGACGATACCGGGGACCGACTACAAGCTGCACACCAGCATGCCCTATCTGGGTGCCGGCTTCCGGGCGAATGCTGCCACGTTGCAGGTCTTCCTCTGTACCTTCCTGACAGTCACACTGGCCCGCATGCTGACCCTGTTCTAGGGACC ] [+] EMBL BM642288 [ ccGCGGGAAACGAACGGCAGCACGGTGGTGTTCTGCAATGTGGGTGAAATTTTCCCCCGACCGGAAGTTTCGCTGCTCATCGATAACGAGAAGGTGCCCGACGCGGTGGAAACGGAACAGGTGCAGGAGTACACCAACTACTACAACATGACGGTACAGTACATCCTGCCCGACCAGAACAAGGACATGGAGCTGGAGTGTGAGGTGACGATACCGGGGACCGACTACAAGCTGCGCACCAGCATGCCCTATCTGGGTGCCGCCTTCCGGGCGAATGCTGCCACGTTGCAGGTCTTCCTCTGTACCTTCCTGACAGTCACACTGGCCCGCATGCTGACCCTGTTCTAGGGACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTGCTCCACAGAAAATGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGC CCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCTTTACGCTTACCCATCTATTCCCTCACTTCAGAGGGATGTGGAGAGGGA ] [+] EMBL BX620082 [ CGGAACAAGTGCAAGAGTACACCAACTACTACAACATGACGGTACAGTACATCCTGCCCGACCAGAACAAGGACATGGAGCTGGAGTGTGAGGTGACGATACCGGGGACCGACTACAAGCTGCGCACCAGCATGCCCTATCTGGGTGCCGCCTTCCGGGCGAATGCTGCCACGTTGCAGGTCTTCCTCTGTACCTTCCTGACAGTCACACTGGCCCGCATGCTGACCCTGTTCTAGGGACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTGCTCCACAGAAAATGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCAGTCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCCACTTCAGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTTGTGATCGCTGNTTTCTTGTGTACACCAC] [+] EMBL BX623827 [ CAGAACAAGGACATGGAGCTGGAGTGTGAGGTGACGATACCGGGGACCGACTACAAGCTGCGCACCAGCATGCCCTATCTGGGTGCCGCCTTCCGGGCGAATGCTGCCACGTTGCAGGTCTTCCTCTGTACCTTCCTGACAGTCACACTGGCCCGCATGCTGACCCTGTTCTAGGGACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTGCTCCACAGAAAATGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCAGTCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCCACTTCAGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTTGTGATCGCTGTTTTCTTGTGTACACC ] consensusID : consensus_9255#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 672 fasta sequence [CCGCCCACGCGTCCGGGATCGGATCAACCGTTAACCGTACGTGCCTCATTTCGTGTACCGTGTGTGCGTTCGTGTGTGTGTGTGTGTATCTTTTGGTGTACCCCGTCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAGTTTGACAGCGGTGCGGATCAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGTCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACCCTCTCTCCACCCCCCGATTCTAGATCCTATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAAATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCGGTCGTGTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAG] [+] EMBL BM595610 [CCGCCCACGCGTCCGGGATCGGATCAACCGTTAACCGTACGTGCCTCATTTCGTGTACCGTGTGTGCGTTCGTGTGTGTGTGTGTGTATCTTTTGGTGTACCCCGTCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAGTTTGACAGCGGTGCGGATCAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGTCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACCCTCTCTCCACCCCCCGATTCTAGATCCTATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAAATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCGGTCGTGTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAG] consensusID : consensus_9255#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 661 fasta sequence [CCGTGCTGACCCTGTTCTAGGGACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTGCTCCACAGAAAATGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCCCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCGACTCCAAAGCGCCCCCGCTCCGGGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTTGTGATCGCTGTTTTCTTGTGTACACCATCGATAGAGAGCCTCTTAAAAGCAAGCGGTTTGAGTTTCGTCAAACGAAACACGTTGTGCCTTGGAAAGCCGCAAAACAACCTCCCTCGAACAGGCGATACAGGAAATATATTGAAAATATATTTTTAAATGTTTAAATTATTAACACCCTGTGCCTCCTCCTCCCACCCCCCGTCCCCGACCTTACCATCTTCCCGAGGAGGATTTAATATGTTTAATAATACAGAAACAATTTACGCTTCGTGTGATGAGGAGGTTATCATCACCCTCGTTGGTGTGCGTGTGCGTGTG] [+] EMBL BM607477 [CCGTGCTGACCCTGTTCTAGGGACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTGCTCCACAGAAAATGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCCCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCGACTCCAAAGCGCCCCCGCTCCGGGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTTGTGATCGCTGTTTTCTTGTGTACACCATCGATAGAGAGCCTCTTAAAAGCAAGCGGTTTGAGTTTCGTCAAACGAAACACGTTGTGCCTTGGAAAGCCGCAAAACAACCTCCCTCGAACAGGCGATACAGGAAATATATTGAAAATATATTTTTAAATGTTTAAATTATTAACACCCTGTGCCTCCTCCTCCCACCCCCCGTCCCCGACCTTACCATCTTCCCGAGGAGGATTTAATATGTTTAATAATACAGAAACAATTTACGCTTCGTGTGATGAGGAGGTTATCATCACCCTCGTTGGTGTGCGTGTGCGTGTG] [+] EMBL BX612134 [ AGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGAATTCCCTCTGCCCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCGGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCGACTCCAAAGCGCCCCCGCTCCGGGAGGGAAGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTTGTGATCGCTGT ] consensusID : consensus_9255#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence [CCGAGTTCAAACGGATCGGATCAACCGTTAACCTGTACCCCGTCCCGCGTGCTTGTGTTTGTGTGTAAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAGTTTGACAGCGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACCCTCTCTCCACCCCCCGATTCTAGATCCTATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAAATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCGGTCGTGTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGCCTTAAAGTTTATCAAC] [+] EMBL BM596440 [CCGAGTTCAAACGGATCGGATCAACCGTTAACCTGTACCCCGTCCCGCGTGCTTGTGTTTGTGTGTAAAAATAGTGAAAATTAGGCAAGGAAAAGAACGAGAGTTTGACAGCGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACCCTCTCTCCACCCCCCGATTCTAGATCCTATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAAATCACCAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCGGTCGTGTTTAGCGCCTTCAAGGGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGCCTTAAAGTTTATCAAC] consensusID : consensus_9255#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 609 fasta sequence [TGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCCCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCCACTCCAAAGCGTCCCCGCTCCGAGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTGATCGCTGTTTTCTTGTGTACACCACCGATATAGAGAGAGGGAGTCAGCAACCTCTTAAAAGCAAGCGTTTTGAGTTTCGTCAAACGAAACACGTTGTGCCTTGGAAAGCCGCAAAACAACCTCCCTCGAACAGGCGATATAGGAAATATATTGAAAATATATTTTTAAATGTTTAAATTATTAACACCCTGTGCCTCCTCCTCCCACCCCCCGTCCCCGACCTTACCATCTTCCCGAGGAGGATTTAATATGTTTAATAATACAGAAACAATTTACGCTTCGTGTGATGAGGAGGTTATCATCACCCTCCTTGGTGTGCGTGTGCGTGTGTGTGCA] [+] EMBL BX611493 [TGCCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCCCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCCACTCCAAAGCGTCCCCGCTCCGAGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTGATCGCTGTTTTCTTGTGTACACCACCGATATAGAGAGAGGGAGTCAGCAACCTCTTAAAAGCAAGCGTTTTGAGTTTCGTCAAACGAAACACGTTGTGCCTTGGAAAGCCGCAAAACAACCTCCCTCGAACAGGCGATATAGGAAATATATTGAAAATATATTTTTAAATGTTTAAATTATTAACACCCTGTGCCTCCTCCTCCCACCCCCCGTCCCCGACCTTACCATCTTCCCGAGGAGGATTTAATATGTTTAATAATACAGAAACAATTTACGCTTCGTGTGATGAGGAGGTTATCATCACCCTCCTTGGTGTGCGTGTGCGTGTGTGTGCA] [+] EMBL BX612166 [ CCTTTTCGCAGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCCCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCACACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCCACTCCAAAGCGTCCCCGCTCCGAGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCCGCTGCTTTTTGTTGTGATCGCTGTTTTCTTGTGTACACCACCGATAGAGAG ] consensusID : consensus_9255#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence [CCGCCCACGCGTCCGATCGGATCAACCGTTAACCTGTCCCCCGGCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAACAACGAGAATTTGACAACGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACCCCCACACACCCACCCTCCGATTCTAGATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAGATCACTAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTG] [+] EMBL BM645520 [CCGCCCACGCGTCCGATCGGATCAACCGTTAACCTGTCCCCCGGCCCGCGTGCTTGTGTTTGTGTGTGAAAATAGTGAAAATTAGGCAAGGAAAACAACGAGAATTTGACAACGGTGCGGATTAACGCGAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTGTGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTGTGGGTCAGTCGTCTGTAAAACGAAAAGAAACCCCCACACACCCACCCTCCGATTCTAGATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGGGACTTATTTTTAACACCGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAGATCACTAACCTGCGAGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGGCTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAACGAGCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 CCGCCCACGCGTCCGGGATCGGATCAACCGTTAACCGTACGTGCCTCATTTCGTGTACCG 60 consensus_9255#0 --------CCGAAACGGATCGGATCAACCGTTAACCGTACGTGCCTCATTTCGTGTACCG 52 consensus_9255#2 --CCGTGCTGACCCTGTTCTAGGGACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTG 58 consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ---CCGAGTTCA-AACGGATCGGATCAACCGTTAACCTGTACCCCGTCCCGCGTGCTTGT 56 consensus_9255#5 ---CCGCCCACGCGTCCGATCGGATCAACCGTTAACCTGTCCCCCGGCCCGCGTGCTTGT 57 consensus_9255#1 TGTGTGCGTTCGTGTGTGTGTGTGTGTATCTTTTGG-TGTACCCCGTCCCGCGTGCTTGT 119 consensus_9255#0 TGTGTGCGTTCGTGTGTGT------------------TGTCCCCCGTCCCGCGTGCTTGT 94 consensus_9255#2 CTCCACAGAAAATGCCTTTTCGCAGCGATCGC-AGGTGGTTGTCGGTCGTTAGCGCCCG- 116 consensus_9255#4 ------------TGCCTTTTCGCAGCGATCGC-AGGTGGTTGTCGGTCGTTAGCGCCCG- 46 ** * * * * ** * consensus_9255#3 GTTTGTGTGTAAAAA------TAGTGAAAATTAGGCAAGGAAAAGAACGAGAGTTTGACA 110 consensus_9255#5 GTTTGTGTGTGAAAA------TAGTGAAAATTAGGCAAGGAAAACAACGAGAATTTGACA 111 consensus_9255#1 GTTTGTGTGTGAAAA------TAGTGAAAATTAGGCAAGGAAAAGAACGAGAGTTTGACA 173 consensus_9255#0 GTTTGTGTGTGAAAA------TAGTGAAAATTAGGCAAGGAAAAGAACGAGAATTTGACA 148 consensus_9255#2 GTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCCCTACAGTCTTCCC 176 consensus_9255#4 GTCGGCGCGCATAAAGTCTTCTTCCCCATTCTCGACTTCCCTCTGCCCTACAGTCTTCCC 106 ** * * * *** * * * * * * * * * * * consensus_9255#3 GCGGTGCGGATTAACGC--GAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTG 168 consensus_9255#5 ACGGTGCGGATTAACGC--GAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTG 169 consensus_9255#1 GCGGTGCGGATCAACGC--GAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTG 231 consensus_9255#0 GCGGTGCGGATTAACGC--GAACTGTGCGGAATTGCGGTGCGTCGTCGTCCTGTTGTGTG 206 consensus_9255#2 CAGCTCCTCCTCGCCCCCTGTGTCACACAGGATT-CAAAGTGCAATTAATTGTTTGTTCA 235 consensus_9255#4 CAGCTCCTCCTCGCCCCCTGTGTCACACAGGATT-CAAAGTGCAATTAATTGTTTGTTCA 165 * * * * * * * * * *** * * * * **** consensus_9255#3 TGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTG 228 consensus_9255#5 TGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTG 229 consensus_9255#1 TGACGTTTACGACAGCTGCTGCGGCGGGTCATTATTAGACCAGTCGTCATCTGTACGGTG 291 consensus_9255#0 TGACGTTTACGACAGCTGCTGCGGCGGGGCATTATTAGACCAGTCGTCATCTGTACGGTG 266 consensus_9255#2 TTACGCTTCCC-CATCTATTCC------CCGACTCCAAAGCGCCCCCGCTCCGGGAGGGA 288 consensus_9255#4 TTACGCTTCCC-CATCTATTCC------CCCACTCCAAAGCGTCCCCGCTCCGAGAGGGA 218 * *** ** * ** ** * * * * * * * ** * ** consensus_9255#3 TG-GGTCAGTCGTCTGTAAAACGAAAAGAAACC-CTCTC---TCCACCCCCCGATTCTAG 283 consensus_9255#5 TG-GGTCAGTCGTCTGTAAAACGAAAAGAAACC-CCCACACACCCACCCTCCGATTCTAG 287 consensus_9255#1 TG-GGTCAGTCGTCTGTAAAACGAAAAGAAACC-CTCTC---TCCACCCCCCGATTCTAG 346 consensus_9255#0 TG-GGTCAGTCGTCTGTAAAACGAAAAGAAACAACCCCCACCCCCACCCCCCGATTCTAG 325 consensus_9255#2 TGTGGAGAGGGACCTGTTGTA-AATAATTGTTTGTTTTCTGCTGCTTTTTGTTGTTGTGA 347 consensus_9255#4 TGTGGAGAGGGACCTGTTGTA-AATAATTGTTTGTTTTCTGCTGCTTTTTGTTGT---GA 274 ** ** ** **** * * ** * * * consensus_9255#3 ATCCTATTGACACGTTGACATCGAGAATGGATAAGCGGCGGG--GACTTATTTTTAACAC 341 consensus_9255#5 ATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGG--GACTTATTTTTAACAC 345 consensus_9255#1 ATCCTATTGACACGTTGACATCGAGAATGGATAAGCGGCGGG--GACTTATTTTTAACAC 404 consensus_9255#0 ATCCCATTGACACGTTGACATCGAGAATGGATAAGCGGCGGG--GACTTATTTTTAACAC 383 consensus_9255#2 TCGCTGTTTTCTTGTGTACACCATCGATAGAGAG---------------CCTCTTAAAAG 392 consensus_9255#4 TCGCTGTTTTCTTGTGTACACCACCGATATAGAGAGAGGGAGTCAGCAACCTCTTAAAAG 334 * ** * ** *** * ** * * * **** * consensus_9255#3 CGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAAATCACCAACCTGCG 401 consensus_9255#5 CGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAGATCACTAACCTGCG 405 consensus_9255#1 CGGATTAATACTCCTTTTCCTACTGCAAGCTGCCACCTGCCTTGAAATCACCAACCTGCG 464 consensus_9255#0 CGGATTAATACTCCTTTTCCTACTGCAAGCTGTCACCTGCCTTGAGATCACCAACCTGCG 443 consensus_9255#2 CAAGC--GGTTTGAGTTTCGTCAAACGAAACACGTTGTGCCTTGGAAA----GCCGCAAA 446 consensus_9255#4 CAAGC--GTTTTGAGTTTCGTCAAACGAAACACGTTGTGCCTTGGAAA----GCCGCAAA 388 * * **** * * * ******* * * consensus_9255#3 AGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGG 461 consensus_9255#5 AGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGG 465 consensus_9255#1 AGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGG 524 consensus_9255#0 AGTACCGTCCTCGTACAGCATATCGCGCGATGAGGGCGACCACAAACCGCTGATCCTCGG 503 consensus_9255#2 ACAACCTCCCTCGAACAGGCGATACAGGAAATATATTGAAAATATATTTTTAAATGTTTA 506 consensus_9255#4 ACAACCTCCCTCGAACAGGCGATATAGGAAATATATTGAAAATATATTTTTAAATGTTTA 448 * *** ***** **** ** * * * ** * * * * * * consensus_9255#3 CTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAA 521 consensus_9255#5 CTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAA 525 consensus_9255#1 CTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAA 584 consensus_9255#0 CTGCGACTACGACATCGACGAGAGCGAGTCGAAGGGGTTCGTGCTGAAATGGAAGCACAA 563 consensus_9255#2 A-ATTATTAACACCCTG-TGCCTCCTCCTCCCACCC-CCCGTCCCCGACCTTACCATCTT 563 consensus_9255#4 A-ATTATTAACACCCTG-TGCCTCCTCCTCCCACCC-CCCGTCCCCGACCTTACCATCTT 505 * ** ** * * * ** * *** * * * * consensus_9255#3 CGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCGGTCGTGTTTAGCGCCTTCAA 581 consensus_9255#5 CGAGCTG----------------------------------------------------- 532 consensus_9255#1 CGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCGGTCGTGTTTAGCGCCTTCAA 644 consensus_9255#0 CGAGCTGCAGATCTACCAGTGGATACCGTCGCGGAATCCAGTCGTCTTTAGCGCCTTCAA 623 consensus_9255#2 CCCGAGGAGGATTTAATA-TGTTTAATAATACAGAAACAATTTACGCTTCGTGTGATGAG 622 consensus_9255#4 CCCGAGGAGGATTTAATA-TGTTTAATAATACAGAAACAATTTACGCTTCGTGTGATGAG 564 * * * consensus_9255#3 G-GGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGCCT 640 consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 G-GGACACATCGATCTCGGCTACTCCGAG------------------------------- 672 consensus_9255#0 G-GGACACATCGATCTCGGCTACTCCGAGTCGGACGATCGGCTCCACAAGCACAGTGCCT 682 consensus_9255#2 GAGGTTATCATCACCCTCGTTGGTGTGCGTGTGCGTGTG--------------------- 661 consensus_9255#4 GAGGTTATCATCACCCTCCTTGGTGTGCGTGTGCGTGTGTGTGCA--------------- 609 consensus_9255#3 TAAAGTTTATCAAC---------------------------------------------- 654 consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 TAAAGTTTATCAACCCGATAGCCAACTACACCGGCAACTACACGTGCCAGGTGCAGACGT 742 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 ACCAGAGCGTGCAGTCGCGGACGGCCCACCTGCAGATAATCGTGCCCGAGACGGACTTCT 802 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 CGCTCGGCTTCCAGCGGGAAACGAACGGCAGCACGGTGGTGTTCTGCAATGTAGGTGAAA 862 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 TTTTCCCCCGACCGGAAGTTTCGCTGCTCATCGATAACGAGAAGGTGCCCGACGCGGTGG 922 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 AAACGGAACAGGTGCAGGAGTACACCAACTACTACAACATGACGGTACAGTACATCCTGC 982 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 CCGACCAGAACAAGGACATGGAGCTGGAGTGTGAGGTGACGATACCGGGGACCGACTACA 1042 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 AGCTGCGCACCAGCATGCCCTATCTGGGTGCCGCCTTCCGGGCGAATGCTGCCACGTTGC 1102 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 AGGTCTTCCTCTGTACCTTCCTGACAGTCACACTGGCCCGCATGCTGACCCTGTTCTAGG 1162 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 GACCGCGTTTGCATAAGTCGCTTCGTGACTGAAGCTGCTCCACAGAAAATGCCTTTTCGC 1222 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 AGCGATCGCAGGTGGTTGTCGGTCGTTAGCGCCCGGTCGGCGCGCATAAAGTCTTCTTCC 1282 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 CCATTCTCGACTTCCCTCTGCTCTACAGTCTTCCCCAGCTCCTCCTCGCCCCCTGTGTCA 1342 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 CACAGGATTCAAAGTGCAATTAATTGTTTGTTCATTACGCTTCCCCATCTATTCCCCCAC 1402 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 ------------------------------------------------------------ consensus_9255#5 ------------------------------------------------------------ consensus_9255#1 ------------------------------------------------------------ consensus_9255#0 TTCAGAGGGATGTGGAGAGGGACCTGTTGTAAATAATTGTTTGTTTTCTGCTGCTTTTTG 1462 consensus_9255#2 ------------------------------------------------------------ consensus_9255#4 ------------------------------------------------------------ consensus_9255#3 --------------------------------- consensus_9255#5 --------------------------------- consensus_9255#1 --------------------------------- consensus_9255#0 TTGTTGTGATCGCTGNTTTCTTGTGTACACCAC 1495 consensus_9255#2 --------------------------------- consensus_9255#4 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||