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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9269#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1980 fasta sequence
[CCGCCCACGCGTCCGGCTGGAGCTATGGCGCACGCTACCACCGAAGATTCGGCACGACCCAAGCATGGTGTCCTTTCAGCAGGTTGAGCTGGAGCATGCCCGACTGCACGGTGACTGCCATGAGGATTCGTTTCCGGAAATTCAAGGCCTGGAAGAGGACGACGGCGAAGAGGACGAGGACGACGAGGATGAGGAAGAGGAAGATGAAGAGTATGAGAACGAGTTCATCACCATTAACGTTACCAACGAAGAGGGCCAGGCAAAGGAAATAGGACATGTGAAGGAGAAAAAAGAGATTCCTAAACCACACGTTCACCACCTGGCTGGGCATTACATCGGCAACATTACACCGCCGAAGCACGACGATATCAATGATACCGGGCAGACCAATCTAGACGAGGACCATCCGTTCCGGAAGTACTCGAAGATTATCTGCCTGTTCATTACGTGGCTGCTGATAATGTCCTTCATGGTGGTGAAGGACGAAAAGATGGTGGAACCGAAGCATCTATCGATTTCGCCCGGCAAAACGAAGGCTTATATTTTGCCACATCTACCGCAGAGCACCCGCATCAAGGTGACGCTCGAGGGCACGTTCTTGAGCGAACCTTACAGCAACATTACCGAGCATTATCTGGAGGTGTACCTTCAGATGCTATCGTCCACGCTGGAAGGGAACTCTTCCGATATTTACTCATCAAGCTCAGCCAAGAACATCAGTGAATCCTGGTACATCCC-ATCGTACATCCGTACCTGTTCGATAGTGCACCGATCGTGAAGGAGCAGCGTCTGTTCGACATCATCGACAGTAACTACGAGCAGCTGCACCAGACGAACGGTGGCCTGGTGAGGTTGATGATCCGTAGCAACATTCAAGTGAGCATGCCCATCGCCATCCGATACGACCAGTCACCGGTCAATCGGGACGTGGGCGTAATCTACGCCGCGTTTGTGCTGATCTTCCTGTACGTGTTGATCATCTGGGAGATTGTGCACAGGACGTTTGCGGCGGTGATTGCCTCCACACTGGCTATATCGATCCTGGCGGCACTGAACGATCGTCCAACGATGGAGGACATTATTGGGTGGATTGATGTGGAAACGATACTGCTACTGTTCTCGATGATGATTTTGGTGGCGATCCTCGCTGAGACGGGTATCTTCGATTATCTGTCCGTGTACATCTACAAGATAACAAACGGCAAGATATGGAGTCTTATACACTGCCTCTGTTTGTGTACGGTATTGATCTCTTCGTTTTTGGACAACGTAACAACCGTGCTGTTGATGGCTCCCATCACAATAAGACTTTGTGAGGTGATGGACATGAATCCAGTACCAATTTTGATGGCAATCACAGTGCATGCCAACATCGGTGGCACTACCACACCGGTTGGAGATCCTCCCAACATAATCATCACATCGAATCAGTATATTCTGAAACACGGAGTTACCTTCCTTACCTTTACCGCTCACATGCTGGTCGGCGTCATTATCGTCGTCATCACCACCAACATCCATCTGCGCATCATCTACAAAAACATCAACCATCTCCGGATGCACGAGCCGAAAGAGCTGAAGGAGCTGCGTCGCAACATCAAGGTGTGGGAGCGTGCCGCCGGCAAGATCCCGCCCTACTCCAAGGATGCCAACATCGTGCGCGAAACGCTCATGAAGAAGGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGTCCCGGAGGATATCTACCGGGTACCTAATAATGGCCCACGTCGTCTTTGCTTGGCACTAGGTCCGGAACGGATCTAGCTACCTCTCTAGTTTGTAAAGTAAAAACAGCCCCCTCCTCCTACGATCAGACGATCGATGCATCGAAAAGGATTGCAAATATCCCCGTGTCCCCGTGTTACAGTGTCCAGTTCCGTCTAACTGTCGTGTCTCTAGCTTATCTAGGTATCCCTTTGTCTGAAAGAAACAAGTCAA]
[+] EMBL BM603462 [CCGCCCACGCGTCCGGCTGGAGCTATGGCGCACGCTACCACCGAAGATTCGGCACGACCCAAGCATGGTGTCCTTTCAGCAGGTTGAGCTGGAGCATGCCCGACTGCACGGTGACTGCCATGAGGATTCGTTTCCGGAAATTCAAGGCCTGGAAGAGGACGACGGCGAAGAGGACGAGGACGACGAGGATGAGGAAGAGGAAGATGAAGAGTATGAGAACGAGTTCATCACCATTAACGTTACCAACGAAGAGGGCCAGGCAAAGGAAATAGGACATGTGAAGGAGAAAAAAGAGATTCCTAAACCACACGTTCACCACCTGGCTGGGCATTACATCGGCAACATTACACCGCCGAAGCACGACGATATCAATGATACCGGGCAGACCAATCTAGACGAGGACCATCCGTTCCGGAAGTACTCGAAGATTATCTGCCTGTTCATTACGTGGCTGCTGATAATGTCCTTCATGGTGGTGAAGGACGAAAAGATGGTGGAACCGAAGCATCTATCGATTTCGCCCGGCAAAACGAAGGCTTATATTTTGCCACACCTACCGCAGAGCACCCGCATCAAGGTGACGCTCGAGGGCACGTTCTTGAGCGAACCTTACAGCAACATTACCGAGCATTATCTGGAGGTGTACCTTCAGATGCTATCGTCCACGCTGGA ]
[+] EMBL BM612947 [ ccgGGCGAAGAGGACGAGGACGACGAGGATGAGGAAGAGGAAGATGAAGAGTATGAGAACGAGTTCATCACCATTAACGTTACCAACGAAGAGGGCCAGGCAAAGGAAATAGGACATGTGAAGGAGAAAAAAGATATTCCGAAACCACACGTTCACCACCTGGCTGGGCATTACATCGGCAACATTACACCGCCGAAGCACGACGATATCAATGATACCGGGCAGACCAATCTAGACGAGGACCATCCGTTCCGGAAGTACTCGAAGATTATCTGCCTGTTCATTACGTGGCTGCTGATAATGTCCTTCATGGTGGTGAAGGACGAAAAGATGGTGGAACCGAAGCATCTATCGATTTCGCCCGGCAAAACGAAGGCTTATATTTTGCCACATCTACCGCAGAGCACCCGCATCAAGGTGACGCTCGAGGGCACGTTCTTGAGCGAACCTTACAGCAACATTACCGAGCATTATCTGGAGGTGTACCTTCAGATGCTATCGTCCACGCTGGAAGGGAACTCTTCCGATATTTACTCATCAAGCTCAGCCAAGAACATCAGTGAATCCTGGTACATCCC ATCGTACATCCGTACCTGTTCGATAGTGCACCGATCGTGAAGGAGCAGCGTCTGTTCGACATCATCGACAGTAACTACGAGCAGCTGCACCAGACGAACGGTGGCCTGGTGAGGTTGATGATCC ]
[+] EMBL BM603263 [ CCGCACGTTCACCACCTGGCTGGGCATTACATCGGCAACATTACACCGCCGAAGCACGACGATATCAATGATACCGGGCAGACCAATCTAGACGAGGACCATCCGTTCCGGAAGTACTCGAAGATTATCTGCCTGTTCATTACGTGGCTGCTGATAATGTCCTTCATGGTGGTGAAGGACGAAAAGATGGTGGAACCGAAGCATCTATCGATTTCGCCCGGCAAAACGAAGGCTTATATTTTGCCACATCTACCGCAGAGCACCCGCATCAAGGTGACGCTCGAGGGCACGTTCTTGAGCGAACCTTACAGCAACATTACCGAGCATTATCTGGAGGTGTACCTTCAGATGCTATCGTCCACGCTGGAAGGGAACTCTTCCGATATTTACTCATCAAGCTCAGCCAAGAACATCAGTGAATCCTGGTACATCCCGATCGTACATCCGTACCTGTTCGATAGTGCACCGATCGTGAAGGAGCAGCGTCTGTTCGACATCATCGACAGTAACTACGAGCAGCTGCACCAGACGAACGGTGGCCTGGTGAGGTTGATGATCCGTAGCAACATTCAAGTGAGCATGCCCATCGCCATCCGATACGACCAGTCACCGGTCAATCGGGACGTGGGCGTAATCTACGCCGCGTTTGTGCTGATCTTCCTGTACGTGTTGATCATCTGGGAGATTGTGCACAGGACGTTTGC ]
[+] EMBL BM602932 [ ACGTGTTGATCATCTGGGAGATTGTACACAGGACGTTTGCGGCGGTGATTGCCTCCACACTGGCTATATCGATCCTGGCGGCACTGAACGATCGTCCAACGATGGAGGACATTATTGGGTGGATTGATGTGGAAACGATACTGCTACTGTTCTCGATGATGATTTTGGTGGCGATCCTCGCTGAGACGGGTATCTTCGATTATCTGTCCGTGTACATCTACAAGATAACAAACGGCAAGATATGGAGTCTTATACACTGCCTCTGTTTGTGTACGGTATTGATCTCTTCGTTTTTGGACAACGTAACAACCGTGCTGTTGATGGCTCCCATCACAATAAGACTTTGTGAGGTGATGGACATGAATCCAGTACCAATTTTGATGGCAATCACAGTGCATGCCAACATCGGTGGCACTACCACACCGGTTGGAGATCCTCCCAACATAATCATCACATCGAATCAGTATATTCTGAAACACGGAGTTACCTTCCTTACCTTTACCGCTCACATGCTGGTCGGCGTCATTATCGTCGTCATCACCACCAACA ]
[+] EMBL BM591673 [ ccgCCCATCACAATAAGACTTTGTGAGGTGATGGACATGAATCCAGTACCAATTTTGATGGCAATCACAGTGCATGCCAACATCGGTGGCACTACCACACCGGTTGGAGATCCTCCCAACATAATCATCACATCGAATCAGTATATTCTGAAACACGGAGTTACCTTCCTTACCTTTACCGCTCACATGCTGGTCGGCGTCATTATCGTCGTCATCACCACCAACATCCATCTGCGCATCATCTACAAAAACATCAACCATCTCCGGATGCACGAGCCGAAAGAGCTGAAGGAGCTGCGTCGCAACATCAAGGTGTGGGAGCGTGCCGCCGGCAAGATCCCGCCCTACTCCAAGGATGCCAACATCGTGCGCGAAACGCTCATGAAGAAGGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGTCCCGGAGGATATCTACCGGGTACCTAATAATGGCCCACGTCGTCTTTGCTTGGCACTAGGTCCGGAACGGATCTAGCTACCTCTCTAGTTTGTAAAGTAAAAACAGCCCCCTCCTCCTACGATCAGACGATCGATGCATCGAAAAGGATTGCAAATATCCCCGTGTCCCCGTGTTACAGTGTCCAGTTCCGTCTAACTGTCGTGTCTCTAGCTTATCTAGGTATCCCTTTGTCTGAAAGAAACAAGTCAA]
consensusID : consensus_9269#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1551 fasta sequence
[CCGGCTGGTCGGCGTCATTATCGTCGT-CATCACCACCAACATCCATCTGCGCATCATCTACAAAAACATCAACCATCTCCGGATGCACGAGCCGAAAGAGCTGAAGGAGCTGCGTCGCAACATCAAGGTGTGGGAGCGTGCCGCCGGCAAGATCCCGCCCTACTCCAAGGATGCCAACATCGTGCGCGAAACGCTCATGAAGAAGGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGTCCCGGAGGATATCTACCGATCGACGCTCGAGGAGCTGCAGCGCGAGCATCCGATCAAGAACCGGCCGCTCCTGATCAAGTCCGGCGTAGTGTGCGTTTTTATCGTGTCGCTGTTCTTCCTCGAGTCAATTCCCGAGCTGCGGCGTCTATCGTCCGGCTGGGCCGCTCTGCTCGGTGTCGTGCTGCTGCTGATCATCTCGGACAAGAACGACATGGACGCGGTGCTGTCGCGCGTCGAGTGGCCAACGCTACTGTTCTTTGCCGCCATGTTTACGCTGATGGAAGCGGTCGAGCGGATGGGACTGATCGATTGGATTGGGCACGCGACGGAAACGATCATCCTGTCCGTGTCGGAGGATCTGCGGCTTGCGGTAGCGATCGTCATCATATTGTGGATCTCGGCCCTGACGTCCGCGTTCGTCGATAGCATCCCGGTAACGGCCATGATGGTGAAGATTGTGGTGGCACTGTCGGAGAAGGCGTATCTGGGCTTGCCGCTGCAGCCGATGGTTTGGGCGCTTGCGTTTGGGCCGTGTCTCGGGGGCAATGGTACGTT-GGTCGGTGCGTCCGCAAACGTCATCTGTGCTGGAATTGCTGAACAGCATGGCTATCGGTTCAGCTTTATGGATTACTTCAAACTCGGATTCCCGATCATGCTGGTCAGTGTGCTGGTCACTACCGGGTACCTAATAATGGCCCACGTCGTCTTTGCTTGGCACTAGGTCC-GAACGGATCTAGCTACCTCTCTAGTTTGTAAAGTAAAAACACCCCCCTTCTCCTGCGATCAGACGATCGATGCAACG-AAAGGATTGCAAATATCCCCTGTGTCCCCGTGTTACAGTGTCCAGTTCCGTCTAACTGTCGTGTCTTCAGCTTGGTATCCCTTTGTCTGAAAGAAACAAGTCAACGTCCATGTACAAGAGGCATGGTTTACATCAGCATCATCATCAGACATCGGTTACCGTACGTCTGTTTCTTACTTGTGTATTTTTAGTAGCGAACACACAGGAAGAGAAAATATTATGAACGTGATTTAAAATCTAAACCCCACATCCGGATGCGGGAGAAATTTGGCCAATTTATTCAACCCACCGCGTTGGGTTGGTGTATTTTTGAGATGATTAAGCGAGTTTGCTTCAAAATGGGCGAACTTGTTTTTGGGTTTTCCTTTCCGTTTTTGTTGTTGTTGTTGATCTTTGATAAGAAATGTAAACAACAGTTTTAGACGCAAATAAAGACGAAAGAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCCCCCC]
[+] EMBL BM612105 [CCGGCTGGTCGGCGTCATTATCGTCGTACATCACCACCAACATCCATCTGCGCATCATCTACAAAAACATCAACCATCTCCGGATGCACGAGCCGAAAGAGCTGAAGGAGCTGCGTCGTAACATCAAGGTGTGGGAGCGTGCCGCCGGAAAGATCCCGCCCTACTCCAAGGATGCCAACATCGTGAGCGAAACGCTCATGAAGAATGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAAATGACCAAGGGTACCGTCCCGGAGGATATCTACCGATCGACTCTCGAGGA ]
[+] EMBL BX624679 [ TCGGCGTCATTATCGTCGT CATCACCACCAACATCCATCTGCGCATCATCTACAAAAACATCAACCATCTCCGGATGCACGAGCCGAAAGAGCTGAAGGAGCTGCGTCGCAACATCAAGGTGTGGGAGCGTGCCGCCGGCAAGATCCCGCCCTACTCCAAGGATGCCAACATCGTGCGCGAAACGCTCATGAAGAAGGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGTCCCGGAGGATATCTACCGATCGACGCTCGAGGAGCTGCAGCGCGAGCATCCGATCAAGAACCGGCCGCTCCTGATCAAGTCCGGCGTAGTGTGCGTTTTTATCGTGTCGCTGTTCTTCCTCGAGTCAATTCCCGAGCTGCGGCGTCTATCGTCCGGCTGGGCCGCTCTGCTCGGTGTCGTGCTGCTGCTGATCATCTCGGACAAGAACGACATGGACGCGGTGCTGTCGCGCGTCGAGTGGCCAACGCTACTGTTCTTTGCCGCCATGTTTACGCTGATGGAAGCGGTCGAGCGGATGGGACTGATCGATTGGATTGGGCACGCGACGGAAACGATCATCCTGTCCGTGTCGGAGGATCTGCGGCTTGCGGTAGCGATCGTCATCATATTGTGGATCTCGGCCCTGACGTCCGCGTTCGTCGATAGCATCCCGGTAACGGCCATGATGGTGAAGATTGTGGTGGCACTGTCGGAGAANGCGTATCTGGGCTTGCCGCTGCAGCCGATGGNTTGGGCGCTTGCGTTTGGGCCGTGTCTCGGGGGCAATGGTACGTT GGTCGGNGCGTCCGCAAAC ]
[+] EMBL BX610050 [ AAGAGCTGAAGGAGCTGCGTCGCAACATCAAGGTGTGGGAGCGTGCCGCCGGCAAGATCCCGCCCTACTCCAAGGATGCCAACATCGTGCGCGAAACGCTCATGAAGAAGGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGTCCCGGAGGATATCTACCGATCGACGCTCGAGGAGCTGCAGCGCGAGCATCCGATCAAGAACCGGCCGCTCCTGATCAAGTCCGGCGTAGTGTGCGTTTTTATCGTGTCGCTGTTCTTCCTCGAGTCAATTCCCGAGCTGCGGCGTCTATCGTCCGGCTGGGCCGCTCTGCTCGGTGTCGTGCTGCTGCTGATCATCTCGGACAAGAACGACATGGACGCGGTGCTGTCGCGCGTCGAGTGGCCAACGCTACTGTTCTTTGCCGCCATGTTTACGCTGATGGAAGCGGTCGAGCGGATGGGACTGATCGATTGGATTGGGCACGCGACGGAAACGATCATCCTGTCCGTGTCGGAGGATCTGCGGCTTGCGGTAGCGATCGTCATCATATTGTGGATCTCGGCCCTGACGTCCGCGTTCGTCGATAGCATCCCGGTAACGGCCATGAT ]
[+] EMBL BM576171 [ cCGCTCATGAAGAAGGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGTCCCGGAGGATATCTACCGATCGACGCTCGAGGAGCTGCAGCGCGAGCATCCGATCAAGAACCGGCCGCTCCTGATCAAGTCCGGCGTTGTGTGCGTTTTTATCGTGTCGCTGTTCTTCCTCGAGTCAATTCCCGAGCTGCGGCGTCTATCGTCCGGCTGGGCCGCTCTGCTCGGTGTCGTGCTGCTGCTGATCATCTCGGACAAGAACGACATGGACGCGGTGCTGTCGCGCGTCGAGTGGCCAACGCTACTGTTCTTTGCCGCCATGTTTACGCTGATGGAAGCGGTCGAGCGGATGGGACTGATCGATTGGATTGGGCACGCGACGGAAACGATCATCCTGTCCGTGTCGGAGGATCTGCGGCTTGCGGTAGCGATCGTCATCATATTGTGGATCTCGGCCCTGACATCTGCGTTCGTCGATAGCATCCCGGTAACGGCCATGATGGTGAAGATTGTGGTGGCACTGTCGGAGAAGGCGTATCTGGGCTTGCCGCTGCAGCCGATGGTTTGGGCGCTTGCGTTTGGACCGTGTCTCGGGGGCAATGGTACATTGGGTCGGTGCGTCCGCAAAC ]
[+] EMBL BX615437 [ AAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGTCCCGGAGGATATCTACCGATCGACGCTCGAGGAGCTGCAGCGCGAGCATCCGATCAAGAACCGGCCGCTCCTGATCAAGTCCGGCGTAGTGTGCGTTTTTATCGTGTCGCTGTTCTTCCTCGAGTCAATTCCCGAGCTGCGGCGTCTATCGTCCGGCTGGGCCGCTCTGCTCGGTGTCGTGCTGCTGCTGATCATCTCGGACAAGAACGACATGGACGCGGTGCTGTCGCGCGTCGAGTGGCCAACGCTACTGTTCTTTGCCGCCATGTTTACGCTGATGGAAGCGGTCGAGCGGATGGGACTGATCGATTGGATTGGGCACGCGACGGAAACGATCATCCTGTCCGTGTCGGAGGATCTGCGGCTTGCGGTAGCGATCGTCATCATATTGTGGATCTCGGCCCTGACGTCCGCGTTCGTCGATAGCATCCCGGTAACGGCCATGATGGTGAAGATTGTGGTGGCACTGTCGGAGAAGGCGTATCTGGGCTTGCCGCTGCAGCCGATGGTTTGGGCGCTTGCGTTTGGGCCGTGTCTCGGGGGCAATGGTACGTT GGTCGGTGCGTCCGCAAACGTCATCTGTGCTGGAATTGCTGAACAGCATGGCTATCGGTTCAGCTTTATGGATTACT ]
[+] EMBL BX617970 [ GATTGGATTGGGCACGCGACGGAAACGATCATCCTGTCCGTGTCGGAGGATCTGCGGCTTGCGGTAGCGATCGTCATCATATTGTGGATCTCGGCCCTGACGTCCGCGTTCGTCGATAGCATCCCGGTAACGGCCATGATGGTGAAGATTGTGGTGGCACTGTCGGAGAAGGCGTATCTGGGCTTGCCGCTGCAGCCGATGGTTTGGGCGCTTGCGTTTGGGCCGTGTCTCGGGGGCAATGGTACGTT GGTCGGTGCGTCCGCAAACGTCATCTGTGCTGGAATTGCTGAACAGCATGGCTATCGGTTCAGCTTTATGGATTACTTCAAACTCGGATTCCCGATCATGCTGGTCAGTGTGCTGGTCACTACCGGGTACCTAATAATGGCCCACGTCGTCTTTGCTTGGCACTAGGTCC GAACGGATCTAGCTACCTCTCTAGTTTGTAAAGTAAAAACACCCCCCTTCTCCTGCGATCAGACGATCGATGCAACG AAAGGATTGCAAATATCCCCTGTGTCCCCGTGTTACAGT ]
[+] EMBL BX612488 [ TTGCGTTTGGGCCGTGTCTCGGGGGCAATGGTACGTT GGTCGGTGCGTCCGCAAACGTCATCTGTGCTGGAATTGCTGAACAGCATGGCTATCGGTTCAGCTTTATGGATTACTTCAAACTCGGATTCCCGATCATGCTGGTCAGTGTGCTGGTCACTACCGGGTACCTAATAATGGCCCACGTCGTCTTTGCTTGGCACTAGGTCC GAACGGATCTAGCTACCTCTCTAGTTTGTAAAGTAAAAACACCCCCCTTCTCCTGCGATCAGACGATCGATGCAACG AAAGGATTGCAAATATCCCCTGTGTCCCCGTGTTACAGTGTCCAGTTCCGTCTAACTGTCGTGTCTTCAGCTTGGTATCCCTTTGTCTGAAAGAAACAAGTCAACGTCCATGTACAAGAGGCATGGTTTACATCAGCATCATCATCAGACATCGGTTACCGTACGTCTGTTTCTTACT ]
[+] EMBL CNS08RDB [ GGATT CCGATCATGCTGGTCAGTGTGCTGGTCACTACCGGGTACCTAATAATGGCCCACGTCGTCTTTGCTTGGCACTAGGTCCGGAAC GATCTAGCTACCTCTCTATTTTGGAAAGTAAAAACACCCCCCTCCTCCTGCGATCAGACGATCGATGCAACGAAAAGGATTGCAAATATCCCC GTGTTTCCGTGTTACAGTGTCCAGTTCCGTCTAACTGTCGTGTCTTTAGGTTGGTACCCCTTTGTCTGAAAGAAACAAGTCAACGTCCATGTACAAGAGACATGGTTTACATCAGCATCATCATCAGACATCGGTTACCGTACGTCTGTTTCTTACTTGTGTATTTTTAGTAGCGAACACACAGGAAGAGAAAATATTATGAACGTGATTTAAAATCTAAACCCCACATCCGGATGCGGGAGAAATTTGGCCAATTTATTCAACCCACCGCGTTGGGTTGGTGTATTTTTGAGATGATTAAGCGAGTTTGCTTCAAAATGGGCGAACTTGTTTTTGGGTTTTCCTTTCCGTTTTTGTTGTTGTTGTTGATCTTTGATAAGAAATGTAAACAACAGTTTTAGACGCAAATAAAGACGAAAGAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCCCCCC]
[-] EMBL CNS08RDC [ TAAACCCCACATCCGGATGCGGGAGAAATTTGGCCAATTTATTCAACCCCCCCCGTTGGGTTGGTGTATTTTTGAGATGATTAAGCGGGTTTGCTTCAAAATGGGGGGACTTGTTTTTGGGTTTTCCTTTCCGTTTTTGTTGTTGTTGTTGATCTTTGATAAGAAATGTAAACAACAGTTTTAGACG ]
consensusID : consensus_9269#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence
[CCGCCCACGCGTCCGGCTTGTCACGGCGCACGCGGTTTTTCCTGCTACAGGGAAACGGTCGGGGCTTTTTTTTTGCGTTTCTGGTGGCGACGAGTTTTCCAGCCCGAAACTCGGGTTACCTTTAGTGTGGTTTGTGTGTGTGTGTTTGGTTTTTGTTTGTCCTGAAACGTTCGTCTCCAAAACACGTGTGTTTTCAAGTGCGTTATTCGTTCGTGATGAGTGCATAAAAGCCCTTACCCCCCCCATCCAACCATGAACTATCTGAACAATCTGAACGTCTTCAAACGGCGGCGTAACACCTCGTCCACCGACTCGTCATCGGCCGTCTCGTCGCCGGCCAGCCCGGCAACGGTCGATGCTGCCGGCACATCCGCTGGTGCAGCTGGCAATGAAGTCGGCACACCGCGGCGCAAGAAGACGAAGAAGAAGAAGGGCCGTAAGCGTACCATTTCCGTTGTTCCCATCAGCGAGGTAACGGAGGCATCGCTGGAGCTATGGCGCACGCTACCACCGAAGATTCGGCACGACCCAAGCATGGTGTCCTTTCAGCAGGTTGAGCTGGAGCATGCCCGACTGCACGGTGACTGCCATGAGGATTCGTTTCCGGAAATTCAAGGACTGGAAGAAGACGACGGCGAAGAGGA]
[+] EMBL BM592840 [CCGCCCACGCGTCCGGCTTGTCACGGCGCACGCGGTTTTTCCTGCTACAGGGAAACGGTCGGGGCTTTTTTTTTGCGTTTCTGGTGGCGACGAGTTTTCCAGCCCGAAACTCGGGTTACCTTTAGTGTGGTTTGTGTGTGTGTGTTTGGTTTTTGTTTGTCCTGAAACGTTCGTCTCCAAAACACGTGTGTTTTCAAGTGCGTTATTCGTTCGTGATGAGTGCATAAAAGCCCTTACCCCCCCCATCCAACCATGAACTATCTGAACAATCTGAACGTCTTCAAACGGCGGCGTAACACCTCGTCCACCGACTCGTCATCGGCCGTCTCGTCGCCGGCCAGCCCGGCAACGGTCGATGCTGCCGGCACATCCGCTGGTGCAGCTGGCAATGAAGTCGGCACACCGCGGCGCAAGAAGACGAAGAAGAAGAAGGGCCGTAAGCGTACCATTTCCGTTGTTCCCATCAGCGAGGTAACGGAGGCATCGCTGGAGCTATGGCGCACGCTACCACCGAAGATTCGGCACGACCCAAGCATGGTGTCCTTTCAGCAGGTTGAGCTGGAGCATGCCCGACTGCACGGTGACTGCCATGAGGATTCGTTTCCGGAAATTCAAGGACTGGAAGAAGACGACGGCGAAGAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9269#0 CCGCCCACGCGTCCGGCTGGAGCTATGGCGCACGCTACCACCGAAGATTCGGCACGACCC 60
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 ------------------------------------------------------------
consensus_9269#0 AAGCATGGTGTCCTTTCAGCAGGTTGAGCTGGAGCATGCCCGACTGCACGGTGACTGCCA 120
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 ------------------------------------------------------------
consensus_9269#0 TGAGGATTCGTTTCCGGAAATTCAAGGCCTGGAAGAGGACGACGGCGAAGAGGACGAGGA 180
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 ------------------------------------------------------------
consensus_9269#0 CGACGAGGATGAGGAAGAGGAAGATGAAGAGTATGAGAACGAGTTCATCACCATTAACGT 240
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 ------------------------------------------------------------
consensus_9269#0 TACCAACGAAGAGGGCCAGGCAAAGGAAATAGGACATGTGAAGGAGAAAAAAGAGATTCC 300
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 ------------------------------------------------------------
consensus_9269#0 TAAACCACACGTTCACCACCTGGCTGGGCATTACATCGGCAACATTACACCGCCGAAGCA 360
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 -----------------------------------CCGGCTGGTCGGCGTCATTATCGT- 24
consensus_9269#0 CGACGATATCAATGATACCGGGCAGACCA--ATCTAGACGAGGACCATCCGTTCCGGAAG 418
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 CGTCATCACCACCAACATCCATCTGCGCATCATCTACAAAAACATCAACCATCTCCGGA- 83
consensus_9269#0 TACTCGAAGATTATCTGCCTGTTCA-TTACGTGGCTGCTGATAATGTCCTTCATGGTGGT 477
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 TGCACGAGCCGAAAGAGCTGAAGGAGCTGCGTCGCAAC-ATCAAGGTGTGGGAGCGTGCC 142
consensus_9269#0 GAAGGACGAAAAGATGGTGGAACCGAAGCATCTATCGATTTCGCCCGGCAAAACGAAGGC 537
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 GCCGG-CAAGATCCCGCCCTACTCCAAGGA--TGCCAACATCGTGCG-CGAAACGCTCAT 198
consensus_9269#0 TTATATTTTGCCACATCTACCGCAGAGCACCCGCATCAAGGTGACGCTCGAGGGCACGTT 597
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 GAAGAA---GGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTACCGT 255
consensus_9269#0 CTTGAGCGAACCTTACAGCAACATTACCGAGCATTATCTGGAGGTGTACCTTCAGATGCT 657
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 CCCGGAGGATATCTACCGATCGACGCTCGAGGAGCTGCAGCGCGAGCATCCGATCAAGA- 314
consensus_9269#0 ATCGTCCACGCTGGAAGGGAACTCTTCCGATATTTACTCATCAAGCTCAGCCAAGAACAT 717
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 ACCGGCCGCTCCTGATC--AAGTCCGGCGTAGTGTGCGTTTTTATCGTGTCGCTGTTCTT 372
consensus_9269#0 CAGTGAATCCTGGTACATCCCATCGTACATCCGTACCTGTTCGATAGTGCACCGATCGTG 777
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 CCTCGAGTC-----AATTCCCGAGCTGCGGCGTCTATCGTCCGGCTGGGCCGCTCTGCTC 427
consensus_9269#0 AAGGAGCAGCGTCTGTTCGACATCATCGACAGTAACTACGAGCAGCTGCACCAGACGAAC 837
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 GGTGTCGTGCTGCTGCTGATCATCTCGGACAAGAACGACATGGACGCGGTGCTGTCGCGC 487
consensus_9269#0 GGTGGCCTGGTGAGGTTGATGATCCGTAGCAACATTCAAGTGAGCATGCCCATCGCCATC 897
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 GTCGAGTGGCCAACGCTACTGTTCTTTGCCGCCATGTTTACGCTGATGGAAGCGGTCGAG 547
consensus_9269#0 CGATACGACCAGTCACCGGTCAATCGGGACGTGGGCGTAATCTACGCCGCGTTTGTGCTG 957
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 CGGATGGG------ACTGATCGATTGGATTGGGCACGCGACGGAAACGATCATCCTGTCC 601
consensus_9269#0 ATCTTCCTGTACGTGTTGATCATCTGGGAGATTGTGCACAGGACGTTTGCGGCGGTGATT 1017
consensus_9269#2 ----------------------------------------------------CCGCCCAC 8
consensus_9269#1 GTGTCGGAGGATCTGCGGCTTGCGGTAGCGATCGTCATCATATTGTGGATCTCGGCCCTG 661
* *
consensus_9269#0 GCCTCCACACTGGCTATATCGATCCTGGCGGCACTGAACGATCGTCCA-ACGATGGAGGA 1076
consensus_9269#2 GCGTCCG-GCTTGTCACGGCGCACGCGGTTTTTCCTG-CTACAGGGAA-ACGGTCGGGGC 65
consensus_9269#1 ACGTCCGCGTTCGTCGATAGCATCCCGGTAACGGCCA-TGATGGTGAAGATTGTGGTGGC 720
* *** * * * ** * * * * * * **
consensus_9269#0 CATTATTGGGTGGATTGATGTGGAAACGATACTGCTA---CTGTTCTCGATGATGATTTT 1133
consensus_9269#2 TTTTTTTTTGCGT-TTCTGGTGGCGACGAGTTTTCCAGC-CCGAAACTCGGGTTACCTTT 123
consensus_9269#1 ACTGTCGGAGAAGGCGTATCTGGGCTTGCCGCTGCAGCCGATGGTTTGGGCGCTTGCGTT 780
* * *** * * * * * * **
consensus_9269#0 GGTGGCGATCCTCGCTGAGACGGGTATCTTCGATTATCTGTCCGTGTACATCTACAAGAT 1193
consensus_9269#2 AGTGTGGTTTGTGTGTGTGTGTTTGGTTTTTGTTTGTCCTGAAACGTTCGTCTCCAAAAC 183
consensus_9269#1 TGGGCCGTGTCTCGGGGGCAATGGTACGTTGGTCGGTGCGTCCGCAAACGTCATCTGTGC 840
* * * * * ** * * * ** *
consensus_9269#0 AACAAACGGCAAGATATGGAGTCTTATACACTGCCTCTGTTTGTGTACGGTATTGATCTC 1253
consensus_9269#2 AC------GTGTGTTTTCAAGTGCGTTATTCGTTCGTGATGAGTGCATAAAA--GCCCTT 235
consensus_9269#1 TG-----GAATTGCTGAACAGCATGGCTATCGGTTCAGCTTTATGGATTACTTCAAACTC 895
* * ** * * ** * **
consensus_9269#0 TTCGTTTTTGGACAACGTAACAACCGTGCTGTTGATGGCTCCCATCACAATAAGACTTTG 1313
consensus_9269#2 ACCCCCCCCATCCAAC-CATGAACTAT-CTGAACAATCTGAACGTCTTCAAACGGCGGCG 293
consensus_9269#1 GG-ATTCCCGATCATGCTGGTCAGTGTGCTGGTCACTACCGGGTACCTAATAATGGCCCA 954
** * * *** * * * *
consensus_9269#0 TGAGGTGATGGACATGAATCCAGTACCAATTTTGATGGCAATCACAGTGCATGCCAACAT 1373
consensus_9269#2 TAACACCTCGTCCACCGACTCGTCATCGGCCGTCTCGTCGCCGGCCAGCCCGGCAACGGT 353
consensus_9269#1 CGTCGTCTTTGCTTGGCACTAGGTCCGAACGGATCTAGCTACCTCTCTAGTTTGTAAAGT 1014
* * * * *
consensus_9269#0 CGGTGGCACTACCACACCGGTTGGAGATCCTCCCAACATAATCATCACATCGAATC---A 1430
consensus_9269#2 CGATGCTGCCGGCACATCCGCTGGTGCAGCTGGCAATGAAGTCGGCACACCGCGGCGCAA 413
consensus_9269#1 AAAAACACCCCCCTTCTCCTGCGATCAGACGATCGATGCAACGAAAGGATTGCA-----A 1069
* * * * * * * * * * *
consensus_9269#0 GTATATTCTGAAACACGGAGTTACCTTCCTTACCTTTACC--GCTCACATGCTGGTCGGC 1488
consensus_9269#2 GAAGACGAAGAAGAAGAAGGGCCGTAAGCGTACCATTTCC--GTT---GTTCCCATCAGC 468
consensus_9269#1 ATATCCCCTGTGTCCCCGTGTTACAGTGTCCAGTTCCGTCTAACTGTCGTGTCT-TCAGC 1128
* * * * * * * ** **
consensus_9269#0 GTCATTATCGTCGTCATCACCACCAACATCCATCTGCGCATCATCTACAAAAACATCAAC 1548
consensus_9269#2 GAGGT-AACGGAGGCATCGCTGGAGCTATGG---CGCACGCTACCACCGAAGAT-TCGGC 523
consensus_9269#1 TTGGT-ATCCCTTTGTCTGAAAGAAACAAGTCAACGTCCATGTACAAGAGGCATGGTTTA 1187
* * * * * * * *
consensus_9269#0 CATCTCCGGATGCACGAGCCGAAAGAGCTGAAGGAGCTGCGTCGCAAC-ATCAAGGTGTG 1607
consensus_9269#2 ACGACCCAAGCATGGTGTCCT------TTCAGCAGGTTGAGCTGGAGC-ATGCCCGACTG 576
consensus_9269#1 CATCAGCATCATCATCAGACATCGGTTACCGTACGTCTGTTTCTTACTTGTGTATTTTTA 1247
* * ** * * *
consensus_9269#0 GGAGCGTGCCGCCGGCAAGATCCCGCCCTACTCCAAGGATGCCAACATCGTGCGCGAAAC 1667
consensus_9269#2 CACGGTGACTGCCATGAGGATTC------GTTTCCGGAAATTCAAGGACTGGAAGAAGAC 630
consensus_9269#1 GTAGCGAACACACAGGAAGAGAA------AATATTATGAACGTGATTTAAAATCTAAACC 1301
* * * * ** * * * * *
consensus_9269#0 GCTCATGAAGAAGGTGAAGCTGTTGCGCCACCAGTACAAGAAGAAGATGACCAAGGGTAC 1727
consensus_9269#2 GACGGCGAAGAGGA---------------------------------------------- 644
consensus_9269#1 CCACATCCGGATGCGGGAGAAATTTGGCCAATTTATTCAACCCACCGCGTTGGGTTGGTG 1361
** *
consensus_9269#0 CGTCCCGGAGGATATCTACCGGGT--ACCTAATAATGGCCCACGTCGTCTTTGCTTGGCA 1785
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 TATTTTTGAGATGATTAAGCGAGTTTGCTTCAAAATGGGCGAACTTGTTTTTGGGTTTTC 1421
consensus_9269#0 CTAGGTCCGGAACGGATCTAGCTACCTCTCTAGTTTGTAAAGTAAAAACAGCCCCCTCCT 1845
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 CT--TTCCGTTTTTGTTGTTGTTGTTGATCTTTGATAAGAAATGTAAACAACAGTTTTAG 1479
consensus_9269#0 CCTACGATCA-GACGATCGATGCATCGAAAAGGATTGCAAATATCCCCGTGTCCCCGTGT 1904
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 ACGCAAATAAAGACGAAAGAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAA 1539
consensus_9269#0 TACAGTGTCCAGTTCCGTCTAACTGTCGTGTCTCTAGCTTATCTAGGTATCCCTTTGTCT 1964
consensus_9269#2 ------------------------------------------------------------
consensus_9269#1 TGTGCCCCCCCC------------------------------------------------ 1551
consensus_9269#0 GAAAGAAACAAGTCAA 1980
consensus_9269#2 ----------------
consensus_9269#1 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||