|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9272#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1600 fasta sequence
[CCGCCCACGCGTCCGCGCAGTATCGCTTTCAGTAAATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAAGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGGACGAGGTTCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCGAATCGGGTGAAGGAGGTGTGCTGGCAGCTGGGCTTTCGCCGGCCGGCCGTAGCGCAGAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGG-AACCGAGCACCACGATCGGATTCTGGATACCGCTGGAGGATGCAATGCTACAGAACGGGTGTCTACACTTCATCAAGGGTTCACACAAAAGCGGAGTCCATCGTCGATGGATTCGCAACCC-GGACAAGGGAGCGGACGAGCTGCTAGTCTACGATCGGCCGGCACCACTCTACCCGCAGTCCAACTTTGTCGCCGTGCCGGTAAAGGCTGGTTCGTGCGTCCTCATCCACAGCCAGGCCGTACACCGCAGCGATGCGAACAAGTCGGACCGTAGCCGGCACGCGTACACCTTCCACGTGATCGAAACCGAAGACAGTGAATATTCCAAAGAGAACTGGCTGCAACCGGCCGAGGATCACCCGTTTCCGGTGCTGTACGAACGGAAATAAGGAAAAATGGCCGCCGCAATACCAAACAGTGCAACAATGCAAACGATCGATTCCTGCTGGCGACGATCGTTTTAGAGTTTAAAATGTTACTGTTCCTGCTCTACTCTGAAGCTCAGGTGGAATGAATTGTCTCTCTTTGTGTGTCTACGGTATATGTAAATCTGTGTGCTTGTGTTTGTATAGTTACTTTTTCCTACCTACGG--CCCCCTATACCGCTACACTCCACAACTTGGTTTCCAACACCCTTTCCTCCGTGCCATAGATGTTTATTTACACTTGGGCGTGCGCGATCGGGCTCTCCGGGATTCCTTTGTTTTACTCGCTTTGAGGCGGCTTATATTAAAGCTCCTATCCACGATCAGCCTGATCGCAAAACGCAGAAG--AAAAAAAACTCAAAGAAAAGGTAACTGCATCGGTATAAAGTACGTAGCAAAAAGGTGAATAAAATTACTACTAAAT]
[+] EMBL BM639828 [CCGCCCACGCGTCCGCGCAGTATCGCTTTCAGTAAATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAAGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGGACGAGGTTCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCGAATCGGGTGAAGGAGGTGTGCTGGCAGCTGGGCT ]
[+] EMBL BX626883 [ CGTTTGTCTGTGTGAAGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGGACGAGGTTCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCGAATCGGGTGAAGGANGTGTGCTGGCAGCTGGGCTTTCGCCGGNCGGCCGTAGCGCAGAGTATGTACATCT ]
[+] EMBL CNS08SIA [ TCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGGACGAGGTTCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAA GAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCGAATCGGGTGAAGGAGGTGTGCTGGCAGCTGGGCTTTCGCCGGCCGGCCGTAGCGCAGAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGG AACCGAGCACCACGATCGGATTCTGGATACCGCTGGAGGATGCAATGCTACAGAACGGGTGTCTACACTTCATCAAGGGTTCACACAAAAGCGGAGTCCATCGTCGATGGATTCGCAACCC GGACAAGGGAGCGGACGAGCTGCTAGTCTACGATCGGCCGGCACCACTCTACCCGCAGTCCAACTTTGTCGCCGTGCCGGTAAAGGCTGGTTCGTGCGTCCTCATCCACAGCCAGGCCGTACACCGCAGCGATGCGAACAAGTCGGACCGTAGCCGGCACGCGTACACCTTCCACGTGATCGAAACCGAAGACAGTTAATATTCCAAAGAGAACTGGCTGCAACCGGCCGAGGATCACCCGTTTCCGGTGCTGTACGAACGGAAATAAGGAAAAATGGCCGCCGCAATACCAAACAGTGCAA AATGCAAACGATC ]
[+] EMBL BX622677 [ CGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGGACGAGGTTCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCGAATCGGGTGAATGAGGTGTGCTGGCAGCTGGGCTTTCGCCGGCCGGCCGTAGCGCAGAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGG AACCGAGCACCACGATCGGATTCTGGATACCGCTGGAGGATGCAATGCTACAGAACGGGTGTCTACACTTCATCAAGGGNTCACACAAAAGCGGAGTCCATCGTCGATGGATTCNCAACCCGGGACAAGGGAGCGGACGAGCTGCTAGTCTACGATCGGCCGGCACCACTCTACCCGCAGTCCAACTTTGTCCCCGTGCCGGTAAANGCTGGTTCGTGCGTC ]
[-] EMBL CNS08SIB [ GAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGG AACCGAGCACCACGATCGGATTCTGGATACCGCTGGAGGATGCAATGCTACAGAACGGGTGTCTACACTTCATCAAGGGTTTACACAAAAGCGGAGTCCATCGTCGATGGATTCGCAACCC GGACAAGGGAGCGGACGAGCTGCTAGTCTACGATCGGCCGGCACCACTCTACCCGCAGTCCAACTTTGTCGGCGTGCCGGTAAAGGCTGGTTCGTGCGTCCTCATCCACAGCCAGGCCGTACACCGCAGCGATGCGAACAAGTCGGACCGTAGCCGGCACGCGTACACCTTCCACGTGATCGAAACCGAAGACAGTGAATATTCCAAAGAGAACTGGCTGCAACCGGCCGAGGATCACCCGTTTCCGGTGCTGTACGAACGGAAATAAGGAAAAATGGCCGCCGCAATACCAAACAGTGCAACAATGCAAACGATCGATTCCTGCTGGCGACGATCGTTTTAGAGTTTAAAATGTTACTGTTCCTGCTCTACTCTGAAGCTCAGGTGGAATGAATTGTCTCTCTTTGTGTGTCTACGGTATATGTAAATCTGTGTGCTTGTGTTTGTATAGTTACTTTTTCCTACCTACGGCCCCCCCTATACCGCTACACTCCACAACTTGGTTTCCAACACCCTTTCCTCCGTGCCATAGATGTTTATTTACACTTGGGCGTGCGCGATCGGGCTCTCCGGGATTCCTTTGTTTTACTCGCTTTGAGGCGGCTTATGTTAGAGCTCCTATCCACGATCAGCCTGATCGCAAAACGCAGAAGAAAAAAAAAACTCAAAGAAAAGGTAACTGCACCGGTATAAAGTACGTAGCAAAAAGGT ]
[-] EMBL CNS0987E [ GTATGTACATCTTTAAGAATCCGGGCATTGGCGGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGG AGCCGAGCACCACGATCGGGTTCTGGATACCGCTGGAGGATGCAACGCTACAGAACGGGTGTCTACACTTCATCAAGGGTTCACACAAAAGTGGAGTCCATCGTCGATGGATTCGCAACCC GGACAAGGGCGCGGACGAGCTGCTAGTCTACGATCGGCCGGCACCACTCTACCCGCAGTCCAATTTTGTCGCCGTGCCGGTAAAGGCTGGTTCGTGCGTCCTCATCCACAGCCAGGCCGTACACCGCAGCGATGCGAACAAGTCGGACCGTAGCCGGCACGCGTACACCTTCCACGTGATCGAAACCGAAGACTGTGAATATTCCAAAGAGAACTGGCTGCAACCGGCCGAGGATCACCCGTTTCCGGTGCTGTACGAACGGAACTGAGGAAAAATGGCCGCCACAATACCAAACAGTGCAACAATGCAAACGATCGATTCCAGCTGGCGACGATCGTTTTAGAGTTTAAGATGTTACTGTTCCTGCTCTACTCTGAAGCTCAGGTGGAATGAATTGTCTCTCTTTGTGTGTCTACGGTATATGTAAATCTGTGTGCTTGTGTTTGTATAGTTACTTTTTCCTACCTACGG CCCCCTATACCGCTACACTCCACAACTTGGTTTCCAACACCCTTTCCTCCGTGCCATAGATGTTTATTTACACTTGGGCGTGCGCGATCGGGCTCTCCGGGATTCCTTTGTTTTACTCGCTTTGAGGCGGCTTATATTAAAGCTCCTATCCACGATCAGCCTGATCGCAAAACGCAGAAG AAAAAAAACTCAAAGAAAAGGTAACTGCATCGGTATAAAGTACGTAGCAAAAA ]
[+] EMBL BX626243 [ ACCAGGACGCCACGTACCTGTACACGGAAACCGAGCACCACGATCGGATTCTGGATACCGCTGGAGGATGCAATGCTACAGAACGGGTGNCTACACTNCATCAAGGGTTCACACAAAAGCGGAGTCC ]
[-] EMBL CNS098BW [ TTTGTGTGTCTACGGTATATGTAAATCTGTGTGCTTGTGTTTGTATAGTTACTTTTTCCTACCTACGG CCCCCTATACCGCTACACTCCACAACTTGGTTTCCAACACCCTTTCCTCCGTGCCATAGATGTTTATTTACACTTGGGCGTGCGCGATCGGGCTCTCCGGGATTCCTTTGTTTTACTCGCTTTGAGGCGGCTTATATTAAAGCTCCTATCCACGATCAGCCTGATCGCAAAACGCAGAAG AAAAAAAACTCAAAGAAAAGGTAACTGCATCGGTATAAAGTACGTAGCAAAAAGGTGAATAAAATTACTACTAAAT]
consensusID : consensus_9272#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 948 fasta sequence
[TCGCATGTCCGACGCGACTAGATCGTAGCTCGGTGAACAACGCAGTA-TCGCTTTCAGTAAATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAGGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGCAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCG-GAC-GA-GGTGCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCG-ATCGGGTGAAGGAGGTGTGCTGGCAGCTGGGCTTTCGCCGGCCGGCCGTAGCGCAGAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGGAGCCGAGCACCACGATCGGGTTCTGGATACCGCTGGAGGATGCAACGCTACAGAACGGGGTGTCTACACTTCATCAAGGGTTCACACAAAAGTGGAGTCCATCGTCGATGGATTCGCAACCCGGACAAGGGCGCGGACGAGCTGCTAGTCTACGATCGGCCGGCACCACTCT]
[+] EMBL CNS098BV [TCGCATGTCCGACGCGACTAGATCGTAGCTCGGTGAACAACGCAGTA TCGCTTTCAGTAAATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAGGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGCAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGTGACTGATTGTGCATGAACT ]
[+] EMBL CNS0987D [ tCGACGCGACTAGATCGTAGCTCGGTGAACAACGCAGTACTCGCTTTCAGTAAATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAGGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGCAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCG GAC GA GGTGCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAA GAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCG ATCGGGTGAAGGAGGTGTGCTGGCAGCTGGGCTTTCGCCGGCCGGCCGTAGCGCAGAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGGAGCCGAGCACCACGATCGGGTTCTGGATACCGCTGGAGGATGCAACGCTACAGAACGGGGTGTCTACACTTCATCAAGGGTTCACACAAAAGTGGAGTCCATCGTCGATGGATTCGCAACCCGGACAAGGGCGCGGACGAGCTGCTAGTCTACGATCGGCCGGCACCACTCT]
[+] EMBL BM619416 [ ccgGACGCGACTAGATCGTAGCTCGGTGAACAACGCAATA TCGCTTTCAGTAA ATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAAGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGCAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTAATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCG GAC GA GGTGCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGACCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCCTTCGAGGAGGTTACGTTCTCGAATCGGGTGA ]
[+] EMBL BM641140 [ cCGCGACTAGATCGTAGCTCGGTGAACAACGCAGTA TCGCTTTCAGTAAATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAAGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATCGTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCG GAC GA GGTTCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAA ]
consensusID : consensus_9272#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 791 fasta sequence
[CCGGTCCGACGCGACTAGATCGTAGCTCGGTGAACAACGCAGTATCGCTTTCAGTAAATTATTGATAAGGGGTGCATTTGTCTGTGTAAAGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTAATTCGGTTCGCATTCGGTCTTCAAAGTCACTGTAAGCTTATCGTGCTTGGAGCAGCAGTTGTGTACCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGGACGAGGTGCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTTAGCGCCAAGTCGGACAGCAAATCGGCCCAGAGTCGGGGAGCAGTACTTTCTCGAAAGTGCCGATAAGGTGCGCTACTTCTTCGAGGAAAGTGCGGTCGGTGAAAACGGTGAACTGCTGGGTTGATCCGGCAATCGCACTGAACAAGGGGGGGCCACGCCACTGTCACACCGAAACATCCGGGCCTTCCGAGGAGGGTTACCGTTTCTCCGGATCCGGGATGAAAGGAAGGTGGTGCTTGGCCAGCTGGGGCTTTTCCCCCGGGCCCGGGCCGTAACCGCAAAAGTAATGGTAAATTCTTTTTAAAAAATCCCGGGGCATTTGGGGGGGGGGAGGGTTTAAATTCCGCCCCCAGGGACCCCCCC]
[+] EMBL BM657793 [CCGGTCCGACGCGACTAGATCGTAGCTCGGTGAACAACGCAGTATCGCTTTCAGTAAATTATTGATAAGGGGTGCATTTGTCTGTGTAAAGCAGTGAAGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTAATTCGGTTCGCATTCGGTCTTCAAAGTCACTGTAAGCTTATCGTGCTTGGAGCAGCAGTTGTGTACCAGTAAAGCTTCTAGAAATTGCCCGACCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACTTTCTGACACCGGACGAGGTGCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACGCACCGAAGGAGGAGCGCAAAGTGTTTAGCGCCAAGTCGGACAGCAAATCGGCCCAGAGTCGGGGAGCAGTACTTTCTCGAAAGTGCCGATAAGGTGCGCTACTTCTTCGAGGAAAGTGCGGTCGGTGAAAACGGTGAACTGCTGGGTTGATCCGGCAATCGCACTGAACAAGGGGGGGCCACGCCACTGTCACACCGAAACATCCGGGCCTTCCGAGGAGGGTTACCGTTTCTCCGGATCCGGGATGAAAGGAAGGTGGTGCTTGGCCAGCTGGGGCTTTTCCCCCGGGCCCGGGCCGTAACCGCAAAAGTAATGGTAAATTCTTTTTAAAAAATCCCGGGGCATTTGGGGGGGGGGAGGGTTTAAATTCCGCCCCCAGGGACCCCCCC]
consensusID : consensus_9272#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 420 fasta sequence
[ATTGCCCCGAGGTTATGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCTGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCTTCGAGGAGGTTACGTTCTCGAATCGGGTGAANGAGGTGTGCTGGCAGCTGGGCTTTCGCCGGCCGGCGTAGCGCAGAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGGAACCGAGCACCACGATCGGATTCTGGATACCGCTGGAGGATGCAA]
[+] EMBL AL695729 [ATTGCCCCGAGGTTATGACGCACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCTGGCCCAGAGTCGGGAGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGCGGTCGGTGAAAACGGTGAACTGCTGGTTGATCCGGCAATCGCACTGAACAAGGTGGGCCACGCACTGCACACCGAACATCCGGCTTCGAGGAGGTTACGTTCTCGAATCGGGTGAANGAGGTGTGCTGGCAGCTGGGCTTTCGCCGGCCGGCGTAGCGCAGAGTATGTACATCTTTAAGAATCCGGGCATTGGCGGGAGGTTAAATCGCACCAGGACGCCACGTACCTGTACACGGAACCGAGCACCACGATCGGATTCTGGATACCGCTGGAGGATGCAA]
consensusID : consensus_9272#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 342 fasta sequence
[ACGGGCCGNNCAGCNNNATTTGNCGAGGCCAAGAATCGNCACGAGGTNGCATAGCTCGGTGAACAACGCAGTATCGCTTTCAGGTAAATTATTGATAAGGGGTGCATTTGTCTGTGTAAAGCAGGTGAAGGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTAATTCGGTTCGCATTCGGTCTTCAAAGTCACTGTAAGGCTTATCGTGCTTGGAGCAGCAGGTTGTGTACCAGTAAAGCTTCTAGAAATTGCCCGAGCCATGAGGAACCGTCTGATCGATC]
[+] EMBL BX469435 [ACGGGCCGNNCAGCNNNATTTGNCGAGGCCAAGAATCGNCACGAGGTNGCATAGCTCGGTGAACAACGCAGTATCGCTTTCAGGTAAATTATTGATAAGGGGTGCATTTGTCTGTGTAAAGCAGGTGAAGGTGACGGTAGGGCATAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGGTAATTCGGTTCGCATTCGGTCTTCAAAGTCACTGTAAGGCTTATCGTGCTTGGAGCAGCAGGTTGTGTACCAGTAAAGCTTCTAGAAATTGCCCGAGCCATGAGGAACCGTCTGATCGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9272#0 -------------------------CCGCCCACGCGTCCGCGCAGTATCGCTTTCAGTAA 35
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 TCGCATGTCCGACGCGACTAGATCGTAGCTCGGTGAACAACGCAGTATCGCTTTCAGTAA 60
consensus_9272#2 --------CCGGTCCGACGCGACTAGATCGTAGCTCGGTGAACAACGCAGTATCGCTTTC 52
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 ATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAAGCAGTGAAGTGACGGTAGGGCA 95
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ATTATTGATAAGGTTTTGGGTGCGTTTGTCTGTGTGAGGCAGTGAAGTGACGGTAGGGCA 120
consensus_9272#2 AGTAAATTATTGATAAGGGGTGCATTTGTCTGTGTAAAGCAGTGAAGTGACGGTAGGGCA 112
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 TAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGT 155
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 TAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGT 180
consensus_9272#2 TAAGGACTGCGATAAGATAAGCCCTACATTATTCCAGAACAAAACCAAACACTCCATCGT 172
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 GATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATC 215
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 GATCGTTTGTGTTTGGTGATTCGGTTCGCATTCGCTCTTCAGAGTCACTGTAAGCTTATC 240
consensus_9272#2 GATCGTTTGTGTTTGGTAATTCGGTTCGCATTCGGTCTTCAAAGTCACTGTAAGCTTATC 232
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 GTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGTAAAGCTTCTAGAAATTGCCCGA 275
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 GTGCATCTGCGTGCTTGGAGCAGCAGTTGGGTAGCAGCAAAGCTTCTAGAAATTGCCCGA 300
consensus_9272#2 GTG----------CTTGGAGCAGCAGTTGTGTACCAGTAAAGCTTCTAGAAATTGCCCGA 282
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 CCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACT 335
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 CCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACT 360
consensus_9272#2 CCATGAGGAACCGTCTGATCGATCAGATCCGTGAGGATGGTTTCGCCGTGATCGATGACT 342
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 TTCTGACACCGGACGAGGTTCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACG 395
consensus_9272#3 -----------------------------------ATTGCCCCGAGGTTAT-----GACG 20
consensus_9272#1 TTCTGACACCGGACGAGGTGCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACG 420
consensus_9272#2 TTCTGACACCGGACGAGGTGCAGGAACTGTTGCAGGTTGGCCAGAATCTACACAAGGACG 402
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 CACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATC-GGCCCAGAGT 454
consensus_9272#3 CACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATCTGGCCCAGAGT 80
consensus_9272#1 CACCGAAGGAGGAGCGCAAAGTGTTCAGCGCCAAGGCGGACAGCAAATC-GGCCCAGAGT 479
consensus_9272#2 CACCGAAGGAGGAGCGCAAAGTGTTTAGCGCCAAGTCGGACAGCAAATC-GGCCCAGAGT 461
consensus_9272#4 -ACGGGCCGNNCAGCNNNATTTGNCGAGGCCAAGAATCGNCACGAGGTN--GCATAGC-T 56
** * * *** * ** ** * * * ** * * ** ** *
consensus_9272#0 CGGG-AGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGC 513
consensus_9272#3 CGGG-AGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGC 139
consensus_9272#1 CGGG-AGCAGTACTTTCTCGAAAGTGCCGACAAGGTGCGCTACTTCTTCGAGGAAGGTGC 538
consensus_9272#2 CGGGGAGCAGTACTTTCTCGAAAGTGCCGATAAGGTGCGCTACTTCTTCGAGGAAAGTGC 521
consensus_9272#4 CGGTGAACAACGCAGTATCG-------CTTTCAGGTAAATTATTGATAAGGGGTGCATTT 109
*** * ** * * *** * **** ** * * * ** *
consensus_9272#0 GGTCG-GTGAAAACGGTGAACTGCTGG-TTGATCCGGCAATCGCACTG-AACAAGGTGGG 570
consensus_9272#3 GGTCG-GTGAAAACGGTGAACTGCTGG-TTGATCCGGCAATCGCACTG-AACAAGGTGGG 196
consensus_9272#1 GGTCG-GTGAAAACGGTGAACTGCTGG-TTGATCCGGCAATCGCACTG-AACAAGGTGGG 595
consensus_9272#2 GGTCG-GTGAAAACGGTGAACTGCTGGGTTGATCCGGCAATCGCACTG-AACAAGGGGGG 579
consensus_9272#4 GTCTGTGTAAAGCAGGTGAA--GGTGA--CGGTAGGGCATAAGGACTGCGATAAGATAAG 165
* * ** ** ****** * ** * * **** * **** * *** *
consensus_9272#0 --CCACGC-ACTG-CACACCGAA-CATCCGG--CCTTCGAGGAGG-TTACGTTCTC---G 619
consensus_9272#3 --CCACGC-ACTG-CACACCGAA-CATCCGG--C-TTCGAGGAGG-TTACGTTCTC---G 244
consensus_9272#1 --CCACGC-ACTG-CACACCGAA-CATCCGG--CCTTCGAGGAGG-TTACGTTCTC---G 644
consensus_9272#2 G-CCACGCCACTGTCACACCGAAACATCCGGGCCTTCCGAGGAGGGTTACCGTTTCTCCG 638
consensus_9272#4 CCCTACATTATTCCAGGAACAAAACCAAACACTCCATCGTGATCGTTTGTGTTTGG--TA 223
* ** * * * * ** * * ** * * ** *
consensus_9272#0 AATC--GGGTGAAGG--AGGTG-TGCTGG---CAGCTGGGCTTTCGCC----GGCC--GG 665
consensus_9272#3 AATC--GGGTGAANG--AGGTG-TGCTGG---CAGCTGGGCTTTCGCC----GGCC--GG 290
consensus_9272#1 A-TC--GGGTGAAGG--AGGTG-TGCTGG---CAGCTGGGCTTTCGCC----GGCC--GG 689
consensus_9272#2 GATCCGGGATGAAAGGAAGGTGGTGCTTGGC-CAGCTGGGGCTTTTCCCCCGGGCCCGGG 697
consensus_9272#4 ATTC---GGTTCGCATTCGGTCTTCAAAGTCACTGTAAGGCTT----------ATCGTGC 270
** * * *** * * * * ** * * *
consensus_9272#0 CCGTAGC-GCAGA-------GTATGTACATCTTTAAGAATCC--GGGCATT-GGCGGGGA 714
consensus_9272#3 C-GTAGC-GCAGA-------GTATGTACATCTTTAAGAATCC--GGGCATT-GGCGGG-A 337
consensus_9272#1 CCGTAGC-GCAGA-------GTATGTACATCTTTAAGAATCC--GGGCATT-GGCGGGGA 738
consensus_9272#2 CCGTAACCGCAAAAGTAATGGTAAATTCTTTTTAAAAAATCCCGGGGCATTTGGGGGGGG 757
consensus_9272#4 TTGGAGCAGCAGG---------TTGTGTACCAGTAAAGCTTCT-AGAAATT-GCCCGAGC 319
* * * *** * ** * * * *** * *
consensus_9272#0 GGTTAAATCGCACCAGGACGCCACGTACCTGTACACGGAACCGAGCACCACGATCGGATT 774
consensus_9272#3 GGTTAAATCGCACCAGGACGCCACGTACCTGTACACGGAACCGAGCACCACGATCGGATT 397
consensus_9272#1 GGTTAAATCGCACCAGGACGCCACGTACCTGTACACGGAGCCGAGCACCACGATCGGGTT 798
consensus_9272#2 GGAGGGTTTAAATTCCGCCCCCAGGGACCCCCCC-------------------------- 791
consensus_9272#4 CATGAGGAACCGTCTGATCGATC------------------------------------- 342
*
consensus_9272#0 CTGGATACCGCTGGAGGATGCAATGCTACAGAACGGG-TGTCTACACTTCATCAAGGGTT 833
consensus_9272#3 CTGGATACCGCTGGAGGATGCAA------------------------------------- 420
consensus_9272#1 CTGGATACCGCTGGAGGATGCAACGCTACAGAACGGGGTGTCTACACTTCATCAAGGGTT 858
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 CACACAAAAGCGGAGTCCATCGTCGATGGATTCGCAACCCGGACAAGGGAGCGGACGAGC 893
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 CACACAAAAGTGGAGTCCATCGTCGATGGATTCGCAACCCGGACAAGGGCGCGGACGAGC 918
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 TGCTAGTCTACGATCGGCCGGCACCACTCTACCCGCAGTCCAACTTTGTCGCCGTGCCGG 953
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 TGCTAGTCTACGATCGGCCGGCACCACTCT------------------------------ 948
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 TAAAGGCTGGTTCGTGCGTCCTCATCCACAGCCAGGCCGTACACCGCAGCGATGCGAACA 1013
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 AGTCGGACCGTAGCCGGCACGCGTACACCTTCCACGTGATCGAAACCGAAGACAGTGAAT 1073
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 ATTCCAAAGAGAACTGGCTGCAACCGGCCGAGGATCACCCGTTTCCGGTGCTGTACGAAC 1133
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 GGAAATAAGGAAAAATGGCCGCCGCAATACCAAACAGTGCAACAATGCAAACGATCGATT 1193
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 CCTGCTGGCGACGATCGTTTTAGAGTTTAAAATGTTACTGTTCCTGCTCTACTCTGAAGC 1253
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 TCAGGTGGAATGAATTGTCTCTCTTTGTGTGTCTACGGTATATGTAAATCTGTGTGCTTG 1313
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 TGTTTGTATAGTTACTTTTTCCTACCTACGGCCCCCTATACCGCTACACTCCACAACTTG 1373
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 GTTTCCAACACCCTTTCCTCCGTGCCATAGATGTTTATTTACACTTGGGCGTGCGCGATC 1433
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 GGGCTCTCCGGGATTCCTTTGTTTTACTCGCTTTGAGGCGGCTTATATTAAAGCTCCTAT 1493
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 CCACGATCAGCCTGATCGCAAAACGCAGAAGAAAAAAAACTCAAAGAAAAGGTAACTGCA 1553
consensus_9272#3 ------------------------------------------------------------
consensus_9272#1 ------------------------------------------------------------
consensus_9272#2 ------------------------------------------------------------
consensus_9272#4 ------------------------------------------------------------
consensus_9272#0 TCGGTATAAAGTACGTAGCAAAAAGGTGAATAAAATTACTACTAAAT 1600
consensus_9272#3 -----------------------------------------------
consensus_9272#1 -----------------------------------------------
consensus_9272#2 -----------------------------------------------
consensus_9272#4 -----------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||