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Anopheles gambiae
cluster # 9283 cluster # 9283       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9283#0 length = 1206 sequences # 13  
consensus_9283#1 length = 778 sequences # 1  
consensus_9283#2 length = 449 sequences # 1  

consensusID : consensus_9283#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1206
fasta sequence
                              [ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC-CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT-CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG-GGA-TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG-ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG-TT-TCAGCG-TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT-CAGCTCCGCGTT-GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA-AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGCGGTG]

[+] EMBL CNS095AJ             [ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA  GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACG CACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGCTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGT                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09AU4             [          AGTCGTTATTTTTTATT CACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GGATTTGCGTATCGTGGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09L5N             [            TCGTTTTTTTTTATTCC CCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGAAAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTTCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GAA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGT ACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTTCTGGTCCGT                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09DN2             [             tGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCCACCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA  GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGGTATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTtc                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS0908Y             [               TTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA  GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTTCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGT                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08SGB             [                              CCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCA CGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTCGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTTGGGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTTAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCC                                                                                                                                                                                                                          ]
[-] EMBL CNS0908X             [                                                                                                                                                                                                                                                                                                                CCTCGCACTTGGTCGCCT CCCAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGC    ]
[-] EMBL CNS08SGA             [                                                                                                                                                                                                                                                                                                                              GCCTCCCCAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGAACTGCCGCTCGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGTTCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCATAAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCC                                                        ]
[-] EMBL CNS09L5M             [                                                                                                                                                                                                                                                                                                                                     CAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTC TACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTAACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TTATCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTA TAATTCCTACGCCCAA                                                                ]
[-] EMBL CNS095AI             [                                                                                                                                                                                                                                                                                                                                         GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGG TGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTGTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACG CGAGCGGTG]
[-] EMBL CNS09DN1             [                                                                                                                                                                                                                                                                                                                                                  TGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTGTTT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08O4C             [                                                                                                                                                                                                                                                                                                                                                        ACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS09AU3             [                                                                                                                                                                                                                                                                                                                                                                                                                      CACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCTTACCGTTCGCCCACCAGCCGCAGCAGCTTTTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTGTTT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCATCCAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCGCGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTGTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATT                                ]


>consensus_9283#0 ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCCCCC CTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTT GCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCG CCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGT TGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGT CCGCCTCGCACTTGGTCGCCTCCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGG TCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGA TCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGC GCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA GGGATTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGGATA GTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTGTTT CAGCGTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTC ATCAGCTCCGCGTTGGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCC TGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCA CCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTC GCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCT TCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGA ATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCA AGCAAAGCCATCTCAAAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCC AAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGA GCGGTG



consensusID : consensus_9283#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 778
fasta sequence
                              [GCCGNTCGAGNTTNAGGCGCCAGCTCCACGGCACCTGTNACCGATGCGCGACACCTGGTATGCCGTATCGTGGCAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCACCGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGTTGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCTTAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGACGGCACGTCGGACGGNNTTGAACGTGCACGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGAGCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCGAGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGAACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAAACACGCTTAAGTAATAATTTCAGAACCGTTTGCCGACGCCGAGCGGTGTGGTTTAACCNCGGGGATCT]

[-] EMBL AL695637             [GCCGNTCGAGNTTNAGGCGCCAGCTCCACGGCACCTGTNACCGATGCGCGACACCTGGTATGCCGTATCGTGGCAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCACCGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGTTGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCTTAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGACGGCACGTCGGACGGNNTTGAACGTGCACGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGAGCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCGAGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGAACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAAACACGCTTAAGTAATAATTTCAGAACCGTTTGCCGACGCCGAGCGGTGTGGTTTAACCNCGGGGATCT]


>consensus_9283#1 GCCGNTCGAGNTTNAGGCGCCAGCTCCACGGCACCTGTNACCGATGCGCGACACCTGGTA TGCCGTATCGTGGCAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCACCGGATAGTG GGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGTTGCAGGTAA CTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCTTAAAGTTCG GTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTGCGCTTCGTC ACGTACCCCTGCCGGATCGGGACGGCACGTCGGACGGNNTTGAACGTGCACGNTCACCAG GGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGAGCAGGTGGAA CNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTTTGTTTGCTTC AAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCGAGCNGCCGTC CTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGAACGGCTCCAC AGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCT GTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAAACACGCTTAA GTAATAATTTCAGAACCGTTTGCCGACGCCGAGCGGTGTGGTTTAACCNCGGGGATCT



consensusID : consensus_9283#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 449
fasta sequence
                              [CCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCAGAGCGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGTACCGAACGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCCTCCAACACGCTTAAGTAATATTTCAGCANTNACCTCGGGGAT]

[-] EMBL AL932901             [CCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCAGAGCGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGTACCGAACGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCCTCCAACACGCTTAAGTAATATTTCAGCANTNACCTCGGGGAT]


>consensus_9283#2 CCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCG GACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATC TGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGT GACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCAGAGCGA GCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGTACCGAACGG CTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGT TCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCCTCCAACACGCTTA AGTAATATTTCAGCANTNACCTCGGGGAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9283#0      ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCCCCC 60
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      CTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTT 120
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      GCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCG 180
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      CCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGT 240
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      TGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGT 300
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      CCGCCTCGCACTTGGTCGCCTCCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGG 360
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      TCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGA 420
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      TCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGC 480
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------------------------------------------------------------
                                                                                  

consensus_9283#0      GCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGAC-GATGCGCGAC 539
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ------GCCGNTCGAGNTTNAG-GCGCC-AGCTCCACGGCACCTGTNACCGATGCGCGAC 52
                                                                                  

consensus_9283#0      A---GGGATTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGAC-GTG-ACGCACGTCAC 594
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      ACCTGGTATGCCGTATCGTGG-CAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCAC 111
                                                                                  

consensus_9283#0      CGGATAGTGGGCCCGC-ATCTTTTCC--TCCGTCTCCAGCCCCTT-CGGCCAGGGAG--- 647
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      CGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGT 171
                                                                                  

consensus_9283#0      TGCAG--AACTGTTTCAGCG-TTCGCACTGCCGCTTGATGACCGGGGGCGTT-AAATGCA 703
consensus_9283#2      ------------------------------------------------------------
consensus_9283#1      TGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCT 231
                                                                                  

consensus_9283#0      AAAAGTTCGGTATCTTCATCAGCTCCGCGTTGGCAAACTTGCCGGGTGACATT-TGGTTG 762
consensus_9283#2      -----------------------------------------CCGGGTGACATT-TGGTTG 18
consensus_9283#1      TAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTG 291
                                                               ************ ******

consensus_9283#0      CGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTT-GAACGTGCG 821
consensus_9283#2      CGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTT-GAACGTGCG 77
consensus_9283#1      CGCTTCGTCACGTACCCCTGCCGGATCGGGA-CGGCACGTCGGACGGNNTTGAACGTGCA 350
                      ******************************* ******* *******  * ******** 

consensus_9283#0      CGG---CCCGGGCCA-TACCGCACCCCAGTCCTGGTCC-GTGGCCATCTGCTGTGAGCGA 876
consensus_9283#2      CGG---CCCGGGCCA-TACCGCACCCCAGTCCTGGTCC-GTGGCCATCTGCTGTGAGCGA 132
consensus_9283#1      CGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGA 410
                      **    ** ****** ********************** *********************

consensus_9283#0      GGCGGTGGAACCT--CCGGACGGGTCGCTTTCC--GGC-GAGCTAGCC--GCTGTGACTT 929
consensus_9283#2      GGCGGTGGAACCT--CCGGACGGGTCGCTTTCC--GGC-GAGCTAGCC--GCTGTGACTT 185
consensus_9283#1      GCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTT 470
                      *  ********    *****************   *** ********   **********

consensus_9283#0      TGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTC---TTCG-AGACCGCCCGAA--CG 983
consensus_9283#2      TGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTC---TTCG-AGACCGCCAGAG--CG 239
consensus_9283#1      TGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCG 530
                      ************************* ******* *    **** *****  *      **

consensus_9283#0      AGCG-CCGTCCTCCTGCAACCGGGTCGACTGCA-ATCGAATGCCGAC-CGTCTGAACCGA 1040
consensus_9283#2      AGCG-CCGTCCTCCTGCAACCGGGTCGACTGCA-ATCGAATGCCGAC-CGTCTGTACCGA 296
consensus_9283#1      AGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGA 590
                      ***  ****************** ********* ************* ****** *****

consensus_9283#0      CCGGCTCCACAGCAGC-GGCCAGGG-AC-CGCAGGCACGTGCAAGCAAAGCCATCTCAAA 1097
consensus_9283#2      ACGGCTCCACAGCAGC-GGCCAGGG-AC-CGCAGGCACGTGCAAGCAAAGCCATCTCAAA 353
consensus_9283#1      ACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAA 650
                       *************** ******** ** *******************************

consensus_9283#0      ATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTT-CTTACGCCCAAGCCCAGC-CTCCAA 1155
consensus_9283#2      ATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGC-CTCCAA 412
consensus_9283#1      ATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAA 710
                      ********* ************ *********** *** ************** ******

consensus_9283#0      ACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGCGGTG--------- 1206
consensus_9283#2      -CACGCTTAAGTAATA-TTTCAGCANTNACCTCGG-GGAT-------------------- 449
consensus_9283#1      ACACGCTTAAGTAATAATTTCAGAACCG--TTTGC-CGACGCCGAGCGGTGTGGTTTAAC 767
                       *************** ****** *      * *   **                     

consensus_9283#0      -----------
consensus_9283#2      -----------
consensus_9283#1      CNCGGGGATCT 778
                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)