These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9283#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1206 fasta sequence [ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC-CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT-CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG-GGA-TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG-ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG-TT-TCAGCG-TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT-CAGCTCCGCGTT-GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA-AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGCGGTG] [+] EMBL CNS095AJ [ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACG CACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGCTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGT ] [+] EMBL CNS09AU4 [ AGTCGTTATTTTTTATT CACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GGATTTGCGTATCGTGGGCAG ] [+] EMBL CNS09L5N [ TCGTTTTTTTTTATTCC CCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGAAAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTTCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GAA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGT ACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTTCTGGTCCGT ] [+] EMBL CNS09DN2 [ tGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCCACCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGGTATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTtc ] [+] EMBL CNS0908Y [ TTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTTCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGT ] [+] EMBL CNS08SGB [ CCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCA CGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTCGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTTGGGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTTAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCC ] [-] EMBL CNS0908X [ CCTCGCACTTGGTCGCCT CCCAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGC ] [-] EMBL CNS08SGA [ GCCTCCCCAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGAACTGCCGCTCGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGTTCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCATAAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCC ] [-] EMBL CNS09L5M [ CAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTC TACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTAACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TTATCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTA TAATTCCTACGCCCAA ] [-] EMBL CNS095AI [ GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGG TGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTGTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACG CGAGCGGTG] [-] EMBL CNS09DN1 [ TGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTGTTT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAAT ] [+] EMBL CNS08O4C [ ACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCG ] [-] EMBL CNS09AU3 [ CACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCTTACCGTTCGCCCACCAGCCGCAGCAGCTTTTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTGTTT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCATCCAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCGCGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTGTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATT ] consensusID : consensus_9283#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 778 fasta sequence [GCCGNTCGAGNTTNAGGCGCCAGCTCCACGGCACCTGTNACCGATGCGCGACACCTGGTATGCCGTATCGTGGCAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCACCGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGTTGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCTTAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGACGGCACGTCGGACGGNNTTGAACGTGCACGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGAGCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCGAGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGAACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAAACACGCTTAAGTAATAATTTCAGAACCGTTTGCCGACGCCGAGCGGTGTGGTTTAACCNCGGGGATCT] [-] EMBL AL695637 [GCCGNTCGAGNTTNAGGCGCCAGCTCCACGGCACCTGTNACCGATGCGCGACACCTGGTATGCCGTATCGTGGCAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCACCGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGTTGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCTTAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGACGGCACGTCGGACGGNNTTGAACGTGCACGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGAGCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCGAGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGAACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAAACACGCTTAAGTAATAATTTCAGAACCGTTTGCCGACGCCGAGCGGTGTGGTTTAACCNCGGGGATCT] consensusID : consensus_9283#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [CCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCAGAGCGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGTACCGAACGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCCTCCAACACGCTTAAGTAATATTTCAGCANTNACCTCGGGGAT] [-] EMBL AL932901 [CCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCAGAGCGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGTACCGAACGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCCTCCAACACGCTTAAGTAATATTTCAGCANTNACCTCGGGGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9283#0 ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCCCCC 60 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 CTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTT 120 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 GCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCG 180 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 CCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGT 240 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 TGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGT 300 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 CCGCCTCGCACTTGGTCGCCTCCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGG 360 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 TCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGA 420 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 TCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGC 480 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------------------------------------------------------------ consensus_9283#0 GCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGAC-GATGCGCGAC 539 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ------GCCGNTCGAGNTTNAG-GCGCC-AGCTCCACGGCACCTGTNACCGATGCGCGAC 52 consensus_9283#0 A---GGGATTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGAC-GTG-ACGCACGTCAC 594 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 ACCTGGTATGCCGTATCGTGG-CAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCAC 111 consensus_9283#0 CGGATAGTGGGCCCGC-ATCTTTTCC--TCCGTCTCCAGCCCCTT-CGGCCAGGGAG--- 647 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 CGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGT 171 consensus_9283#0 TGCAG--AACTGTTTCAGCG-TTCGCACTGCCGCTTGATGACCGGGGGCGTT-AAATGCA 703 consensus_9283#2 ------------------------------------------------------------ consensus_9283#1 TGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCT 231 consensus_9283#0 AAAAGTTCGGTATCTTCATCAGCTCCGCGTTGGCAAACTTGCCGGGTGACATT-TGGTTG 762 consensus_9283#2 -----------------------------------------CCGGGTGACATT-TGGTTG 18 consensus_9283#1 TAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTG 291 ************ ****** consensus_9283#0 CGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTT-GAACGTGCG 821 consensus_9283#2 CGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTT-GAACGTGCG 77 consensus_9283#1 CGCTTCGTCACGTACCCCTGCCGGATCGGGA-CGGCACGTCGGACGGNNTTGAACGTGCA 350 ******************************* ******* ******* * ******** consensus_9283#0 CGG---CCCGGGCCA-TACCGCACCCCAGTCCTGGTCC-GTGGCCATCTGCTGTGAGCGA 876 consensus_9283#2 CGG---CCCGGGCCA-TACCGCACCCCAGTCCTGGTCC-GTGGCCATCTGCTGTGAGCGA 132 consensus_9283#1 CGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGA 410 ** ** ****** ********************** ********************* consensus_9283#0 GGCGGTGGAACCT--CCGGACGGGTCGCTTTCC--GGC-GAGCTAGCC--GCTGTGACTT 929 consensus_9283#2 GGCGGTGGAACCT--CCGGACGGGTCGCTTTCC--GGC-GAGCTAGCC--GCTGTGACTT 185 consensus_9283#1 GCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTT 470 * ******** ***************** *** ******** ********** consensus_9283#0 TGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTC---TTCG-AGACCGCCCGAA--CG 983 consensus_9283#2 TGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTC---TTCG-AGACCGCCAGAG--CG 239 consensus_9283#1 TGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCG 530 ************************* ******* * **** ***** * ** consensus_9283#0 AGCG-CCGTCCTCCTGCAACCGGGTCGACTGCA-ATCGAATGCCGAC-CGTCTGAACCGA 1040 consensus_9283#2 AGCG-CCGTCCTCCTGCAACCGGGTCGACTGCA-ATCGAATGCCGAC-CGTCTGTACCGA 296 consensus_9283#1 AGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGA 590 *** ****************** ********* ************* ****** ***** consensus_9283#0 CCGGCTCCACAGCAGC-GGCCAGGG-AC-CGCAGGCACGTGCAAGCAAAGCCATCTCAAA 1097 consensus_9283#2 ACGGCTCCACAGCAGC-GGCCAGGG-AC-CGCAGGCACGTGCAAGCAAAGCCATCTCAAA 353 consensus_9283#1 ACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAA 650 *************** ******** ** ******************************* consensus_9283#0 ATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTT-CTTACGCCCAAGCCCAGC-CTCCAA 1155 consensus_9283#2 ATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGC-CTCCAA 412 consensus_9283#1 ATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAA 710 ********* ************ *********** *** ************** ****** consensus_9283#0 ACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGCGGTG--------- 1206 consensus_9283#2 -CACGCTTAAGTAATA-TTTCAGCANTNACCTCGG-GGAT-------------------- 449 consensus_9283#1 ACACGCTTAAGTAATAATTTCAGAACCG--TTTGC-CGACGCCGAGCGGTGTGGTTTAAC 767 *************** ****** * * * ** consensus_9283#0 ----------- consensus_9283#2 ----------- consensus_9283#1 CNCGGGGATCT 778 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||