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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9284#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1698 fasta sequence
[GTCCCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCATCACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAGTCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTGAGCCACACGTTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGAGGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGATTAGTCAC]
[+] EMBL BX625636 [GTCCCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCATCACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAGTCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTG ]
[+] EMBL BM613419 [ ccgCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCACCACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGgt ]
[+] EMBL BX618636 [ ACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTC GGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAAGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCG ]
[+] EMBL BX609194 [ ACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCAT ]
[+] EMBL BM603869 [ ccgGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTT ]
[+] EMBL BX617173 [ GGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCAGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGTTGCTGGCAAAGCATCTGCTCCGTACCGGCGGC CTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTGAGCCACACGCTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATG ]
[+] EMBL BM623275 [ ccgGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGCATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTTAGCCACACGTTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGAGGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGATTAGTCAC]
[+] EMBL BM636576 [ ccgCGTTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGAGGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGATTAGTCAC]
consensusID : consensus_9284#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 683 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCG]
[+] EMBL BM627902 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCG]
[+] EMBL AL713814 [ tccccgattTAAAG TTTTTGAGCCACAGCGCGA CAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGC ]
[+] EMBL BM589185 [ ccgCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCA ]
consensusID : consensus_9284#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 622 fasta sequence
[CCGGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTG]
[+] EMBL BM621941 [CCGGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTG]
[+] EMBL BM601609 [ ccgCGAGTCAAAATCAAAAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGCAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGCCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTGCACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGAC GGCGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGGGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGT ]
consensusID : consensus_9284#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 587 fasta sequence
[CCGCCCACTCGTCCGGAAAGAATAAACGGGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGTAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCCAAACGACGGCCGAGCTGGCGAACATTGTGGTGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCTCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCATATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGTCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTTAGCCACACGCTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGA]
[+] EMBL BM629578 [CCGCCCACTCGTCCGGAAAGAATAAACGGGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGTAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCCAAACGACGGCCGAGCTGGCGAACATTGTGGTGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCTCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCATATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGTCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTTAGCCACACGCTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGA]
consensusID : consensus_9284#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence
[GCAGAATCGGCACGNNNNACGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCTCCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGCAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCGTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAGNNAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCG]
[+] EMBL BX468853 [GCAGAATCGGCACGNNNNACGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCTCCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGCAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCGTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAGNNAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 GTCCCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGC 60
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 ATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCAT 120
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 CACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCC 180
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 TTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGC 240
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 GCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTC 300
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 TTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACC 360
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 CGCGCACCCTTAAGTCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGT 420
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------CCGCCCACGCGTCCGCCC 18
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 CCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGT 480
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAGCGATAGTAGGACGAACTAGTTTAGG 78
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 GTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGG 540
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 TAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCC 138
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 -----------------------------------------------------------C 1
consensus_9284#0 TAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCC 600
consensus_9284#2 ------------------------------------------------CCGGGCGTAATC 12
consensus_9284#1 CCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCA 198
consensus_9284#4 -------------------------------GCAGAATCGGC--ACGNNNNACGCGACCA 27
consensus_9284#3 CGCCCACTCGTCCGGAAAGAATAAACGGGAGGTGCTCGCACGCATCCAGGAACCGGATCT 61
consensus_9284#0 CCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCA 660
consensus_9284#2 TTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGAG 72
* *
consensus_9284#1 GGTGTTTATCGATATGACGTT-CGGTGCGGGCGGT-CACACGCGTGCC-CTGCTCGAGGC 255
consensus_9284#4 GGTGTTTATCGATATGACGTT-CGGTGCGGGCGGT-CACACGCGTGCC-CTGCTCGAGGC 84
consensus_9284#3 CGTGCGCATCCTCAAGGTGTA-CGGGGTAGGAAAAGCAGGCGAAAAAGATTGCCCGCG-- 118
consensus_9284#0 GGTGTTTATCGATATGACGTT-CGGTGCGGGCGGT-CACACGCGTGCC-CTGCTCGAGGC 717
consensus_9284#2 CGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTT-GGAACGGTGGC 131
* * * * * * * * * *
consensus_9284#1 CGCACC-CGGCTCGACGGTGG-TCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCG 313
consensus_9284#4 CGCTCC-CGGCTCGACGGTGG-TCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCG 142
consensus_9284#3 CGATCG-TGAATGCACGGT---TCACGGTGAAGCGCATCCAAACGACGGCCGAGCTGGCG 174
consensus_9284#0 CGCACC-CGGCTCGACGGTGG-TCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCG 775
consensus_9284#2 CGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCG-ATCAGCTGACG 190
** * * *** * * ** * ** **
consensus_9284#1 TGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCG-CTGTTGGGTCGATTTT-CCG 371
consensus_9284#4 TGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCG-CTGTTGGGTCGATTTTTCCG 201
consensus_9284#3 ---AACATTGTGGTGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTAC 231
consensus_9284#0 TGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCG-CTGTTGGGTCGATTTT-CCG 833
consensus_9284#2 ------GTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGG 244
* * * * * * ** * * *
consensus_9284#1 AACTTCCGGCC--------CTGTT-------GCGCACG-GTCGAGGGGCTTGATCGGCA- 414
consensus_9284#4 AACTTCCGGCC--------CTGTT-------GCGCACG-GTCGAGGGGCTTGATCGGCA- 244
consensus_9284#3 GACTTCCGCCAGG-ACAAACTGCTCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGC 290
consensus_9284#0 AACTTCCGGCC--------CTGTT-------GCGCACG-GTCGAGGGGCTTGATCGGCA- 876
consensus_9284#2 CAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCAC- 303
* **** * * ** ** * * *
consensus_9284#1 GCGGCATTTC------GACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGA 468
consensus_9284#4 GCGGCATTTC------GACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGA 298
consensus_9284#3 GCTGCATATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGG-CGA 349
consensus_9284#0 GCGGCATTTC------GACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGA 930
consensus_9284#2 -CCTTAAATC--GACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCAC 360
* * ** * * **** ** * * ** * *
consensus_9284#1 TG-AAGCGGCCCGTGGCTTTTCCATCTCGC--ACGAT---GGG---CCGCTCGAT-ATG- 517
consensus_9284#4 TGCAAGCGGCCCGTGGCTTTTCCATCTCGC--ACGAT---GGG---CCGCTCGAT-ATG- 348
consensus_9284#3 AGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGAT---CGCGTTCCACTCGCTCGAG- 405
consensus_9284#0 TG-AAGCGGCCCGTGGCTTTTCCATCTCGC--ACGAT---GGG---CCGCTCGAT-ATG- 979
consensus_9284#2 CG--AGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGT 418
* * * ** * * ** * *
consensus_9284#1 CGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCG-CGGCCGAGGTGCTCGCACGCAT 576
consensus_9284#4 CGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCG-CGGCCGAGGTGCTCGCACGCAT 407
consensus_9284#3 GACACGATCGTGAAGCGCCATCT-GACCGGTCACGTGGTGGACGATGTGGCGAGCCGCGT 464
consensus_9284#0 CGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCG-CGGCCGAGGTGCTCGCACGCAT 1038
consensus_9284#2 GGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGAT-AGTAGGACGAACTAGTTTAGGT 477
** * * * * * * * ** * *
consensus_9284#1 CCAGGAACCGG-ATCTCGTGCGCATCC-TCAAGGTG-TACGGGGAGGAAAAGCAGGCGAA 633
consensus_9284#4 CCAGGAACCGG-ATCTCGTGCGCATCCGTCAAGGTG-TACGGGGAGGAAAAGCAGGCGAA 465
consensus_9284#3 TCCGCTGCAGT-ACGTTAGCCACACGC----TGGCG-CACGAAACGGAGGCGATGCAGGA 518
consensus_9284#0 CCAGGAACCGG-ATCTCGTGCGCATCC-TCAAGGTG-TACGGGGAGGAAAAGCAGGCGAA 1095
consensus_9284#2 AGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCC 537
* * * * * ** * * ** *
consensus_9284#1 -AAAGATTGCCCGCGC-GATCGTGAATGCAC--G-GTTCACGGTGAAGCGCATCG----- 683
consensus_9284#4 GNNAGATTGCCCGCGC-GATCGTGAATGCAC--G-GTTCACGGTGAAGCGCATCGAAACG 521
consensus_9284#3 GATGATGAAGCCGCACTGGAAGCAGATGCAC--AAGCACGTGATGGTACCGACGGACGAG 576
consensus_9284#0 -AAAGATTGCCCGCGC-GATCGTGAATGCAC--G-GTTCACGGTGAAGCGCATCGAAACG 1150
consensus_9284#2 CTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAG 597
*** * * * * * * *
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ACGGCCG----------------------------------------------------- 528
consensus_9284#3 GAGGTGGCCGA------------------------------------------------- 587
consensus_9284#0 ACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGG 1210
consensus_9284#2 GTGTTTATCGATATGACGTTCGGTG----------------------------------- 622
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 CAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAA 1270
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 ACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATG 1330
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 GTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCG 1390
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 CTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGC 1450
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 CGCGTTCCGCTGCAGTACGTGAGCCACACGTTGGCGCACGAAACGGAGGCGATGCAGGAG 1510
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 ATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAG 1570
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 GTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGA 1630
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 ------------------------------------------------------------
consensus_9284#4 ------------------------------------------------------------
consensus_9284#3 ------------------------------------------------------------
consensus_9284#0 GGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGA 1690
consensus_9284#2 ------------------------------------------------------------
consensus_9284#1 --------
consensus_9284#4 --------
consensus_9284#3 --------
consensus_9284#0 TTAGTCAC 1698
consensus_9284#2 --------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||