These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9304#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1050 fasta sequence [TCGAGCACTGTTGGCCTACTGATACATTTTCACGCGTGGTTCGCGAATCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA-CCCCATAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC-AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC-GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAAAAAAAAAAAGGCCACATGTGCTCG] [-] EMBL CNS09IX4 [TCGAGCACTGTTGGCCTACTGATACATTTTCACGCGTGGTTCGCGAATCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACACCCCCATAAGCTCGAAGTACATATATAACAGGTTGCTTTCTCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACCATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCG TACGC AACGGCTTTATAACAGAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGGAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGAAACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAAT ] [+] EMBL BM613497 [ ccgcttgtcGATACATTTTCACGCGTGGTTCGCGAATCGAGCAGCTCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTC ] [+] EMBL CNS09MEP [ TTTCACGCGTGGTTCGCGAATCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCCCATAAGCTCGAAGTACATATATAACAGGTTGCTTTCTCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACCATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGGAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGAAACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAAAAAAAAAAAGGCCACATGTGCTCG] [+] EMBL CNS09IX3 [ TCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCCCATAAGCTCGAAGTACATATATAACAGGTTGCTTTCTCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACCATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGGAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGAAACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAA ] [+] EMBL CNS08VO8 [ TCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCACATTAGCTCGAAGTACATATATAACAGGTTGCTCACCCACCGCCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAATCAAACGATGCTCACGATTCCTGCAAGAGGTAGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTCGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGTTTGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATATCGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAAAAGCGCCGTCAATGCGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTTTGTTTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTTCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATTGTGTTGAGCACAAGAAGACGAAACAAAAG ] [+] EMBL BX621674 [ GCAAAACGATCACATATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCACAAAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACCGCCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAAGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAAGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTCGACTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTTCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACATTCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATAAAGCGTTTTGCTCAGGACACGGGAAGATTTTATTTCCTTTTCCGATACGAANAGTGATGTGAGTGTGTCTCGCGACNAATATCAACAGCCAGTTCAGCCGCGCACGAAAAg ] [+] EMBL BX622947 [ CGAAAAATGTGAATTTAAATCAATATTCAACA CCACAAAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACCGCCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAAGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAAGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTCGACTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTTCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACATTCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGANGTGGCAAAGTT ] [+] EMBL AGA280119 [ TTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATG ] [-] EMBL CNS08VO9 [ ccACGCGGTTCAAGCGTTGCTAAGCTGGTTGAGGGTTTTGTCG TCCGC CCCGGCTTTTTATCGAAAAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAAAAGCGCCGTCAATGCGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGA TTTTTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACGAAACAAAAGAAGAAGAAATCAAAAAAATAAAAT ] [-] EMBL AGA282543 [ AAGGTGGATGAAGGATGTGTCGCTACGCAAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGTGCACGAAAAAGTTCAAACTGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCAC ] [-] EMBL AGA281817 [ gGAAAACGAACCCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGTGCACGAAAAAGTTCAAACTGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAG ] consensusID : consensus_9304#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 787 fasta sequence [CAGAATCCCCCGAGGTNNACGAGGGTGGTTCGCGAATCGAGCAGCTCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGGCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACACGTCGGCTGAAGAACAGGCCGTCAATGTGCCTATGACCGATGACGGAGGTGGCAANGTTTTACGTTTACGGGCCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTNCAGCTCAGGACACGGGAAGATT] [+] EMBL AL930734 [CAGAATCCCCCGAGGTNNACGAGGGTGGTTCGCGAATCGAGCAGCTCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGGCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACACGTCGGCTGAAGAACAGGCCGTCAATGTGCCTATGACCGATGACGGAGGTGGCAANGTTTTACGTTTACGGGCCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTNCAGCTCAGGACACGGGAAGATT] [+] EMBL AGA280914 [ TTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCATAAGCAGGCCGATGGTTCCA ] consensusID : consensus_9304#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence [GGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGGTACGAAAACGTCTTATCGTTACGTTTTGCCTTTCATTAACCAACTGACTAATATGCGTCTTTTGCTTTCCTTGCGTAGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAA] [+] EMBL BX620671 [GGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGGTACGAAAACGTCTTATCGTTACGTTTTGCCTTTCATTAACCAACTGACTAATATGCGTCTTTTGCTTTCCTTGCGTAGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAA] consensusID : consensus_9304#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 425 fasta sequence [GCGAATCGAGCAGCTCTTAGCNAAACAATCACTTATTAGAAGGTTTCTCCAGCTAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTNGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTNCGACTCCTTTAACCCGAAAGTATTTGGCCAANGTTNAATCATCCTTCCCCGGTGGGACTG] [+] EMBL BX619721 [GCGAATCGAGCAGCTCTTAGCNAAACAATCACTTATTAGAAGGTTTCTCCAGCTAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTNGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTNCGACTCCTTTAACCCGAAAGTATTTGGCCAANGTTNAATCATCCTTCCCCGGTGGGACTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9304#1 ------------------------------------------------------------ consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 ------------------------------------------------------------ consensus_9304#2 GGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCAT 60 consensus_9304#1 -----------------CAGAATCCCCCGAGGTNNACGAGGGTGGTTCGCGAATCGAGCA 43 consensus_9304#3 ------------------------------------------------GCGAATCGAGCA 12 consensus_9304#0 ------TCGAGCACTGTTGGCCTACTGATACATTTTCACGCGTGGTTCGCGAATCGAGCG 54 consensus_9304#2 ACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGGTACGAAAA 120 ** *** consensus_9304#1 GCTCTTAGCAAAACAAT----CACTTATTA-AAGGTTTCTCCAGCGAAAAATGTGAATTT 98 consensus_9304#3 GCTCTTAGCNAAACAAT----CACTTATTAGAAGGTTTCTCCAGCTAAAAATGTGAATTT 68 consensus_9304#0 GCTCTTAGCAAAACGAT----CACTTATTA-AAGGTTTCTCCAGCGAAAAATGTGAATTT 109 consensus_9304#2 CGTCTTATCGTTACGTTTTGCCTTTCATTAACCAACTGACTAATATGCGTCTTTTGCTTT 180 ***** * ** * * * **** * * * * *** consensus_9304#1 AAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACC 158 consensus_9304#3 AAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACC 128 consensus_9304#0 AAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACC 169 consensus_9304#2 CCTTGCGTAGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTG 240 * ** * ***** * * *** ** * ** ****** consensus_9304#1 GTCAGCCAGTGTACAACCATGAACAAAAC-AAGGAAAAGGCGAAAAAGGCTTCCAAA--A 215 consensus_9304#3 GTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAA--A 186 consensus_9304#0 GTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAA--A 227 consensus_9304#2 GGCAAGTGCTAGCCTGCTTTATACTTGAC-TCCTTTAACCCGAAAGTATTTGGCAAGTTA 299 * ** * * * * ** ** ** ***** *** * consensus_9304#1 ACCTTCGTAATGTTTT---AGCTCAACCTTTGACGATTGAT--TGG----GCCC-GCATA 265 consensus_9304#3 ACCTTCGTAATGTTTT---AGCTCAACCTTTGACGATTGAT--TNG----GCCCCGCATA 237 consensus_9304#0 ACCTTCGTAATGTTTT---AGCTCAACCTTTGACGATTGAT--TGG----CCCC-GCATA 277 consensus_9304#2 ATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTC 359 * * ** *** *** **** ** * ** * * * ** * * consensus_9304#1 CCGG-AGAGTGAAGTAA-AACGATGCTCACGATTCCTGCAA-GAGGTGGAA-CGTAAACA 321 consensus_9304#3 CCGG-AGAGTGAAGTAA-AACGATGCTCACGATTCCTGCAA-GAGGTGGAAACGTAAACA 294 consensus_9304#0 CCGG-AGAGTGAAGTAA-AACGATGCTCACGATTCCTGCAA-GAGGTGGAA-CGTAAACA 333 consensus_9304#2 CCGGTGGACTGCGGCCGCAACAGTACCTTT-ATGGCTGTAACGAAGCTCAA-AGAAAACG 417 **** ** ** * *** * * ** *** ** ** * ** * **** consensus_9304#1 CATCGTCAGCGGATGTAACGGCGTCATTA-GATTGCTCCAAAGTGGGCAAGTGCTAGCCT 380 consensus_9304#3 CATCGTCAGCGGATGTAACGGCGTCATTAAGATTGCTCCAAAGTGGGCAAGTGCTAGCCT 354 consensus_9304#0 CATCGTCAGCGGATGTAACGGCGTCATTA-GATTGCTCCAAAGTGGGCAAGTGCTTGCCT 392 consensus_9304#2 AACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACG 477 * ** * * ** **** ** * * * * * ** * * * * consensus_9304#1 GCTTTATACTT------GACTCCTTTAACC-GAAAGTATTTGGC---AAGTTAATCATCC 430 consensus_9304#3 GCTTTATACTNC-----GACTCCTTTAACCCGAAAGTATTTGGCCAANGTTNAATCATCC 409 consensus_9304#0 GCTTCATACTT------GACTCCTTTAACCCGAAAGTATTTGGC---AAGCTAATCATCC 443 consensus_9304#2 GATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATA--CGACAGAAGAAAACGAAACC 535 * ** *** * ** * * * ** * * * * ** consensus_9304#1 AGATGGCACG--AAAGCGTAACCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTG 488 consensus_9304#3 TTCCCCGGTG--GGACTG------------------------------------------ 425 consensus_9304#0 AGATGGCACG--AAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGT 501 consensus_9304#2 ACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTT 595 * * * consensus_9304#1 GACTGCGGCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCG 548 consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 GGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATC 561 consensus_9304#2 TTACGTTTACGGGCCGGCCGTTGAGAA--------------------------------- 622 consensus_9304#1 ACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAA 608 consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 CGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGCTTTAT 621 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 CGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACACGTCGGCTGAA 668 consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 AACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGC 681 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 GAACAGGCCGTCAATGTGCCTATGACCGATGACGGAGGTGGCAANGTTTTACGTTTACGG 728 consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 GAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTA 741 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 GCCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTNCAGCTCAGGACACGGGAAGATT- 787 consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 CGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACACGGAAGATTT 801 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 ------------------------------------------------------------ consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 TATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCC 861 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 ------------------------------------------------------------ consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 AGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGT 921 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 ------------------------------------------------------------ consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 GAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAA 981 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 ------------------------------------------------------------ consensus_9304#3 ------------------------------------------------------------ consensus_9304#0 GAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAAAAAAAAAAAGGCCAC 1041 consensus_9304#2 ------------------------------------------------------------ consensus_9304#1 --------- consensus_9304#3 --------- consensus_9304#0 ATGTGCTCG 1050 consensus_9304#2 --------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||