These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9327#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1763 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGGTGTATTGCATGTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACG-ATTGGAAAGAAATTCA-TTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGCAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAAC--CACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGGCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGACCGGCTGCAGGCGCGCGAGTACGGCGAGCGCAAGATCAAGTCGAACATGGAGTGCGAAATCTTCCAGATACCGCTGGACGAGGCGCGGGACGCGTACCGGAAGGAAATCATCCACGAGGTGACGAGCGACACGGCGGCGGATCTGGACGCGGCGGTCGAGCGCGTGCGCGACTGGCTGGAGCAGTGGAAGGCGAAGCACAATAAATCGTAAA-CCCCCCCCATCAATTCAACCCCTCGTTCAACCGGACGTTGCGTTTTTGTGTTGGGTCGACGGAGCCGATCTGCCCGAAAGCAGGAAAGGAAGAAAAAAACAAAGCGAATTCGTCTCCGCGTTGCCAGCAGCGAAGCTACC-GACAAACCAACACCGGGCGTCAGGCGGCTCCGGGCAAGGTGGTACGAAAATAGAATTTGTACTCACTTGCACAAAACAACCAGCACGACGCAAACGCCAAACTGCTCCAGGGTTTCCTCGGCTTCACCACAATCAAACGAAAGCTTTTGCAACGCTCGGTGTCCCCCAGGCCGCCCATGCGGCAATGCAAGGCGGGAAAAGGATTGTACAGCGAGTGTGTCTTTCGGTGACCCACGTTCTTCGGGGGTGTAATTTGATATACCGCCAATGAGCATTTCAACTGTTTGTGGATGGTTGCCGAAAGGGGTTCACTTTTCATCCCTTCAACGGTTATTTATAGTTCAAGTGCGTTTTTTTTTGCTCTCAATCCAACCCCTGATTGGATGGATGNTTTAGATGGTTTTTTGATTTATGGATCAATATCAATCGGTATGATGNTTTGCTACTTTTTTG-AGCATAATTTGGATAACTGGCTGCTTGGATATTTAAAACAATACTTGATGCACTTTAGAAGATGTTTCATCCCGTGCCTTTTAAATCGTTGGATTTAATCTACTTCCAGCACTTTAAGTCGTTCTGTGGCCCGATACCCGGATATGATTTTTATTTTCAAACTGAAATAACTTTTAATTAAAAAAATTAATTATAACAAAATTCTTTAACATATCTTTAAGACAATTGGACTATCTTGAAGAGTAAATCATAAACATATAATATAACCAAAATCAGGTATGCCAGTCGTAGAGATGTAAATTTGGTCATTGAGATAAAAAAAAAGTCCAATTAAAACTAGATTTCATGCATC] [+] EMBL BM641907 [CCGCGGACGCGTGGGCGGACGCGTGGGGTGTATTGCATGTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACG ATTGGAAAGAAATTCA TTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGCAGAAAAACAAGCGCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAAC CACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGGCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGACCGGCTGCAGGCGCGCGAGTACGGCGAGCGCAAGATCAAGTC ] [+] EMBL BX626878 [ GGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACGAATTGGAAAGAAATTCATTTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGCAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACCAC CACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGTCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGACCGGCTGCAG ] [+] EMBL BM586070 [ ccGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACG ATTGGAAAGAAATTCA TTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGCAGAAAAACAAGCGCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAAC CACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGGCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGACCGGCTGCAGGCGCGCGAGTACGGCGAGCGCAAGATCAAGTCGAACATGGAGTGCGAAATCTTCCAGATACCGCTGGACGAGGCG ] [+] EMBL BX620206 [ GCTATAAGCATTCCACCAGCCAAAAGGGTACG ATTGGAAAGAAATTCA TTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGTCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGACCGGCTGCAGGCGCGCGAGTACGGCGAGCGCAAGATCAAGTCGAACATGGAGTGCGAAATCTTCCANATACCGCTGGACGANGCGCGGGACGCGTACCGGAAGGAAATCATCCACGANGTGACGAGCGA ] [+] EMBL BM655122 [ AGCTCATTTTGGAGGAGAAGCGCATCGCGGCGAAATGTGTTACTGTTGATGCCGTACACCGCGTGCAGTACACAAC CACACACACCATCACAGCACGCACGTTCCACCATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACG ] [+] EMBL BX623637 [ CGACCGGCTGCAGGCGCGCGAGTACGGCGAGCGCAAGATCAAGTCGAACATGGAGTGCGAAATCTTCCAGATACCGCTGGACGAGGCGCGGGACGCGTACCGGAAGGAGATCATCCACGAGGTGACGAGCGACACGGCGGCGGATCTGGACGCGGCGGTCGAGCGCGTGCGCGACTGGCTGGAGCAGTGGAAGGCGAAGCACAATAAATCGTAAA CCCCCCCCATCAATTCAACCCCTCGTTCAACCGGACGTTGCGTTTTTGTGTTGGGTCGACGGAGCCGATCTGCCCGAAAGCAGGAAAGGAAGAAAAAAACAAAGCGAATTCGTCTCCGCGTTGCCAGCAGCGAAGCTACC GACAAACCAACACCGGGCGTCAGGCGGCTCCGGGCAAGGTGGTACGAAAATAGAATTTGTACTCACTTGCACAAAACAACCAGCACGACGCAAACGCCAAACTGCTCCAGGGTTTCCTCGGCTTCACCACAATCAAACGAAAGCTTTTGCAACGCTCGGTGTCCCCCAGGCCGCCCATGCGGCAATGCAAGGCGGGAAAAGGATTGTACAGCGAGTGCGTCTTTCGGTGACCCACGTTCTTCGGGGGTGTAATTTGATATACCGCCAATGAGCATTTCAACTGTTTGTGGATGGTTGCCGAAAGGGGTTCACTTTTCATCCCTTCAACGGTTATTTATAGTTCAAGTGCGTTTTTTTTTGCTCTCAATCCAACCCCTGATTGGATGGATGNTTTAGATGGTTTTTTGATTTATGGATCAATATCAATCGGTATGATGNTTTGCTACTTTTTTG AGCATAATTTGGATAACTGGCTGC ] [+] EMBL BM654511 [ ccgCACGAGGTGACGAGCGACACGGCGGCGGATCTGGACGCGACGGTCGAGCGCGTGCGCGACTGGCTGGAGCAGTGGAAGGCGAAGCACAATAAATCGTAAACCCCCCCCCATCAATTCAACCCCTCGTTCAACCGGACGTTGCGTTTTTGTGTTGGGTCGACGGAGCCGATCTGCCCGAAAGCAGGAAAGGAAGAAAAAA AAAGCGAATTCGTCTCCGCGTTGCCAGCAGCGAAGCTACCGGACAAACCAAAACCGGGCGTCAGGCGGCTCCGGGCAAGGTGGTACGAAAATAGAATTTGTACTCACTTGCACAAAACAACCAGCACGACGCAAACGCCAAACTGCTCCAGGGTTTCCTCGGCTTCACCACAATCAAACGAAAGCTTTTGCAACGCTCGGTGTCCCCCAGGCCGCCCATGCGGCAATGCAAGGCGGGAAAAGGATTGTACAGCGAGTGTGTCTTTCGG ] [+] EMBL BX628059 [ GGGTTTCCTCGGCTTCACCACAATCAAACGAAAGCTTTTGCAACGCTCGGTGTCCCCCAGGGCGCCCATGCGGCAATGCAAGGCGGGAAAAGGATTGTACAGCGAGTGTGTCTTTCGGTGACCCACGTTCTTCGGGGGTGTAATTTGATATACCGCCAATGAGCATTTCAACTGTTTGTGGATGGTTGCCGAAAGGGGTTCACTTTTCATCCCTTCAACGGTTATTTATAGTTCAAGTGCGTTTTTTTTTGCTCTCAATCCAAGCCCTGATTGGATGGATGTTTTAGATGTTTTTTTGATTTATGGATCAATATCAATCGTTATGATGTTTTGCTACTTTTTTGAAGCATAATTCGGATAGCTGGCTGCTTGGATATTTAAAACAATACTTGATGCACTTTAGAAGATGTTTCATCCCGTGCCTTTTAAATCGTTGGATTTAATCTACTTCCAGCACTTTAAGTCGTTCTGTGGCCCGATACCCGGATATGATTTTTATTTTCAAACTGAAATAACTTTTAATTAAAAAAATTAATTATAACAAAATTCTTTAACATATCTTTAAGACAATTGGACTATCTTGAAGAGTAAATCATAAACATATAATATAACCAAAATCAGGTATGCCAGTCGTAGAGATGTAAATTTGGTCATTGAGATAAAAAAAAAGTCCAATTAAAACTAGATTTCATGCATC] consensusID : consensus_9327#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 595 fasta sequence [CCGGTTGCCAAGTGTGTATTGCATGTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGCAGAAAAACAAGCGCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGGTTCGCGGCGGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGAC] [+] EMBL BM583401 [CCGGTTGCCAAGTGTGTATTGCATGTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGCAGAAAAACAAGCGCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGGTTCGCGGCGGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGAC] [+] EMBL BM582453 [ GAAATTCATTTTTTTTTCGAGAATTATCGAACAGTGGCATCTAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGCAGAAAAACAAGCGCATTTTGGAGGAGAAGCGCATCTCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCCGAACTGTGCCGGCAGCTGG ] consensusID : consensus_9327#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 593 fasta sequence [AGGCAAGAATCGCCCGAGGTATTGCATGTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGTCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGT] [+] EMBL AL931962 [AGGCAAGAATCGCCCGAGGTATTGCATGTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGTCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGT] [+] EMBL BX628963 [ AAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTG ] [+] EMBL AGA285853 [ GCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACCACACACACACCATCACAGCACGCACGTTCCACGATGGTGCTGCCCAACATTCTCGTGACAGGAACGCCCGGCACGGGTAAGTCGGAACTGTGCCGGCAGCTGGCGGACAAGCTCGGCTTCCGGTGGCAGAACGTGAGCGAGATCGTGACCGAGCACAAGTTCGTGGAGGAGTACGACGAGGAGTTCGAGTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGCTGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCTGGTTCGCGTCGGTCTGGGTCGTCCGCTGCT ] consensusID : consensus_9327#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 506 fasta sequence [TTGCCCCGAGGTTTTTGTCGTCGGGGCCTGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAATGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACACACACACACATCACAGGACGCACGTTCCACGATGGTGCTGCCAACCATTCTCGTGACAGGAACGCCCGGCACGGGTTAAGTCGGAACTGTGCCGGGCCAGCTGGCGGACAAGGCTCGGGCTTCCGGTGGCCAGAACGTGAGCGAGCATCGTGACCGAGCACAAGTTCGCTGGCACGGAGTACGACGAGGAGTTCGAGGTTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGGAGCCCGCCTGATGCCAGGAGCGGCGGCT] [+] EMBL AL929975 [TTGCCCCGAGGTTTTTGTCGTCGGGGCCTGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAATGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTGCTGTTGATGCCGTACACCGCGTGCAGTACACAACACACACACACATCACAGGACGCACGTTCCACGATGGTGCTGCCAACCATTCTCGTGACAGGAACGCCCGGCACGGGTTAAGTCGGAACTGTGCCGGGCCAGCTGGCGGACAAGGCTCGGGCTTCCGGTGGCCAGAACGTGAGCGAGCATCGTGACCGAGCACAAGTTCGCTGGCACGGAGTACGACGAGGAGTTCGAGGTTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGGAGCCCGCCTGATGCCAGGAGCGGCGGCT] consensusID : consensus_9327#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 327 fasta sequence [AGAATCCCCACGAGGNGTTATTGCATTGTTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTTGGGGCCCGTTTGGGTTTCTTGGATGCCGTACACCGCGGTGCAGTACACAACCACACAGCAGCACGCATCGAACAGCACGCACGTTCCACGATGGTGCTGCCCCAAGCA] [+] EMBL BX466169 [AGAATCCCCACGAGGNGTTATTGCATTGTTGTTTGTCGTCGGGGCCGCTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAGAATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGGTAGAAAAACAAGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTTGGGGCCCGTTTGGGTTTCTTGGATGCCGTACACCGCGGTGCAGTACACAACCACACAGCAGCACGCATCGAACAGCACGCACGTTCCACGATGGTGCTGCCCCAAGCA] consensusID : consensus_9327#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 215 fasta sequence [GTCGAACATGGAGTGGGAAATTTTCCAGATACCGTTGGACGAGGCGCGGGACGCGTACCGGAAGGAGATCATCCACGGGGTGACGGGGGACACGGCGGCGGATTTGGACGCGACGGTCGAGCGCGTGCGGGAATGGTTGGAGCAGTGGAAGGCGAAGCACAATAAATCGTAAACCCCCCCATCAATTCAACCCCTGGTTCTTCCGGGAAAAAAAA] [-] EMBL AGA284550 [GTCGAACATGGAGTGGGAAATTTTCCAGATACCGTTGGACGAGGCGCGGGACGCGTACCGGAAGGAGATCATCCACGGGGTGACGGGGGACACGGCGGCGGATTTGGACGCGACGGTCGAGCGCGTGCGGGAATGGTTGGAGCAGTGGAAGGCGAAGCACAATAAATCGTAAACCCCCCCATCAATTCAACCCCTGGTTCTTCCGGGAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9327#3 -----------------------------TTGCCCCGAGGTT-TTTGTCGTCGGGGCCTG 30 consensus_9327#4 ------------AGAATCCCCACGAGGNGTTATTGCATTGTTGTTTGTCGTCGGGGCC-G 47 consensus_9327#2 -----------AGGCAAGAATCGCCCGAGGTATTGCATG--TGTTTGTCGTCGGGGCC-G 46 consensus_9327#1 --------------CCGGTTGCCAAGTGTGTATTGCATG--TGTTTGTCGTCGGGGCC-G 43 consensus_9327#0 CCGCGGACGCGTGGGCGGACGCGTGGGGTGTATTGCATG--TGTTTGTCGTCGGGGCC-G 57 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 CTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAG 90 consensus_9327#4 CTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAG 107 consensus_9327#2 CTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAG 106 consensus_9327#1 CTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAG 103 consensus_9327#0 CTATAAGCATTCCACCAGCCAAAAGGGTACGATTGGAAAGAAATTCATTTTTTTTTCGAG 117 consensus_9327#5 -------------------------------GTCGAACATGGAGTGGGAAATTTTCCAGA 29 * * * * * * **** * consensus_9327#3 AATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGG 150 consensus_9327#4 AATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGG 167 consensus_9327#2 AATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGG 166 consensus_9327#1 AATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGG 163 consensus_9327#0 AATTAGCGAACAGTGGCATCGAGGCGTCGTTGGAGCATCCTAAATCTGCACCATCCTTGG 177 consensus_9327#5 TACCGTTGGAC---------GAGGCGCGG--GACGCGTACCGGAAGGAGATCATCC---A 75 * * ** ****** * * ** * * * * ***** consensus_9327#3 TAGAAAAACAATGCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTG-----CT 205 consensus_9327#4 TAGAAAAACAA-GCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTTGGGGCCC 226 consensus_9327#2 TAGAAAAACAA-GCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTG-----CT 220 consensus_9327#1 CAGAAAAACAA-GCGCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTG-----CT 217 consensus_9327#0 CAGAAAAACAA-GCTCATTTTGGAGGAGAAGCGCATCGCGGTGAAATGTGTTG-----CT 231 consensus_9327#5 CGGGGTGACGGGGGACACGGCGGCGGATTTGGACGCGACGGTCGAGCGCGTGCGGGAATG 135 * ** * ** ** *** * * **** * * ** consensus_9327#3 GTT-----------GATGCCGTACACCGCG-TGCAGTACACAAC-ACACA----CACAC- 247 consensus_9327#4 GTTTGGGTTTCTTGGATGCCGTACACCGCGGTGCAGTACACAACCACACAGCAGCACGC- 285 consensus_9327#2 GTT-----------GATGCCGTACACCGCG-TGCAGTACACAACCACACA----CACACC 264 consensus_9327#1 GTT-----------GATGCCGTACACCGCG-TGCAGTACACAACCACACA------CACC 259 consensus_9327#0 GTT-----------GATGCCGTACACCGCG-TGCAGTACACAACCACACA------CACC 273 consensus_9327#5 GTT-----------GGAGCAGTGGAAGGCGAAGCACAATA-AATCGTAAACCCCCCCATC 183 *** * ** ** * *** *** * * ** * * * consensus_9327#3 ATC--ACAGGACGCACGTTCCACGATGGTGCTGC--CAACCATTCTCGTGACAGGAACGC 303 consensus_9327#4 ATCGAACAGCACGCACGTTCCACGATGGTGCTGCCCCAAGCA------------------ 327 consensus_9327#2 ATC--ACAGCACGCACGTTCCACGATGGTGCTGC--CCAACATTCTCGTGACAGGAACGC 320 consensus_9327#1 ATC--ACAGCACGCACGTTCCACGATGGTGCTGC--CCAACATTCTCGTGACAGGAACGC 315 consensus_9327#0 ATC--ACAGCACGCACGTTCCACGATGGTGCTGC--CCAACATTCTCGTGACAGGAACGC 329 consensus_9327#5 AATTCAACCCCTGGTTCTTCCGGGAAAAAAAA---------------------------- 215 * * * **** ** consensus_9327#3 CCGGCACGGGTTAAGTCGGAACTGTGCCGGGCCAGCTGGCGGACAAGGCTCGGGCTTCCG 363 consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 CCGGCACGGGT-AAGTCGGAACTGTGCCGG--CAGCTGGCGGACAAG--CTCGGCTTCCG 375 consensus_9327#1 CCGGCACGGGT-AAGTCGGAACTGTGCCGG--CAGCTGGCGGACAAG--CTCGGCTTCCG 370 consensus_9327#0 CCGGCACGGGT-AAGTCGGAACTGTGCCGG--CAGCTGGCGGACAAG--CTCGGCTTCCG 384 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 GTGGCCAGAACGTGAGCGAGCATCGTGACCGAGCACAAGTTCGCTGGCACGGAGTACGAC 423 consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 GTGGC-AGAACGTGAGCGAG-ATCGTGACCGAGCACAAGTTCGTGGA---GGAGTACGAC 430 consensus_9327#1 GTGGC-AGAACGTGAGCGAG-ATCGTGACCGAGCACAAGTTCGTGGA---GGAGTACGAC 425 consensus_9327#0 GTGGC-AGAACGTGAGCGAG-ATCGTGACCGAGCACAAGTTCGTGGA---GGAGTACGAC 439 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 GAGGAGTTCGAGGTTGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGGAGCCC 483 consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 GAGGAGTTCGAG--TGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGC 488 consensus_9327#1 GAGGAGTTCGAG--TGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGC 483 consensus_9327#0 GAGGAGTTCGAG--TGCCCGGTGCTGGACGAGGACCGGCTGCTCGACCATCTCGAGCCGC 497 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 GCCTGATGCCAGGAGCGGCGGCT------------------------------------- 506 consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 TGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCT 548 consensus_9327#1 TGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCT 543 consensus_9327#0 TGATGCAGGAGGGCGGCTGCGCGGTCGAGTACCACAGCTCGGAGTTCTTCCCGGAGCGCT 557 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 GGTTCGC--GTCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGT------------- 593 consensus_9327#1 GGGTTCGCGGCGGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGAC-------- 595 consensus_9327#0 GGTTCGC--GGCGGTCTGGGTCGTCCGCTGCTCGACCTCGCTGCTGTACGACCGGCTGCA 615 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 GGCGCGCGAGTACGGCGAGCGCAAGATCAAGTCGAACATGGAGTGCGAAATCTTCCAGAT 675 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 ACCGCTGGACGAGGCGCGGGACGCGTACCGGAAGGAAATCATCCACGAGGTGACGAGCGA 735 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 CACGGCGGCGGATCTGGACGCGGCGGTCGAGCGCGTGCGCGACTGGCTGGAGCAGTGGAA 795 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 GGCGAAGCACAATAAATCGTAAACCCCCCCCATCAATTCAACCCCTCGTTCAACCGGACG 855 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 TTGCGTTTTTGTGTTGGGTCGACGGAGCCGATCTGCCCGAAAGCAGGAAAGGAAGAAAAA 915 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 AACAAAGCGAATTCGTCTCCGCGTTGCCAGCAGCGAAGCTACCGACAAACCAACACCGGG 975 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 CGTCAGGCGGCTCCGGGCAAGGTGGTACGAAAATAGAATTTGTACTCACTTGCACAAAAC 1035 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 AACCAGCACGACGCAAACGCCAAACTGCTCCAGGGTTTCCTCGGCTTCACCACAATCAAA 1095 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 CGAAAGCTTTTGCAACGCTCGGTGTCCCCCAGGCCGCCCATGCGGCAATGCAAGGCGGGA 1155 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 AAAGGATTGTACAGCGAGTGTGTCTTTCGGTGACCCACGTTCTTCGGGGGTGTAATTTGA 1215 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 TATACCGCCAATGAGCATTTCAACTGTTTGTGGATGGTTGCCGAAAGGGGTTCACTTTTC 1275 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 ATCCCTTCAACGGTTATTTATAGTTCAAGTGCGTTTTTTTTTGCTCTCAATCCAACCCCT 1335 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 GATTGGATGGATGNTTTAGATGGTTTTTTGATTTATGGATCAATATCAATCGGTATGATG 1395 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 NTTTGCTACTTTTTTGAGCATAATTTGGATAACTGGCTGCTTGGATATTTAAAACAATAC 1455 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 TTGATGCACTTTAGAAGATGTTTCATCCCGTGCCTTTTAAATCGTTGGATTTAATCTACT 1515 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 TCCAGCACTTTAAGTCGTTCTGTGGCCCGATACCCGGATATGATTTTTATTTTCAAACTG 1575 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 AAATAACTTTTAATTAAAAAAATTAATTATAACAAAATTCTTTAACATATCTTTAAGACA 1635 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 ATTGGACTATCTTGAAGAGTAAATCATAAACATATAATATAACCAAAATCAGGTATGCCA 1695 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 ------------------------------------------------------------ consensus_9327#4 ------------------------------------------------------------ consensus_9327#2 ------------------------------------------------------------ consensus_9327#1 ------------------------------------------------------------ consensus_9327#0 GTCGTAGAGATGTAAATTTGGTCATTGAGATAAAAAAAAAGTCCAATTAAAACTAGATTT 1755 consensus_9327#5 ------------------------------------------------------------ consensus_9327#3 -------- consensus_9327#4 -------- consensus_9327#2 -------- consensus_9327#1 -------- consensus_9327#0 CATGCATC 1763 consensus_9327#5 -------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||