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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9338#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1569 fasta sequence
[GGGACGCATGTCGTAGGATCCATCGTACAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTACTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCTTCCTGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTTACGCTGGTGCCAGTGGCAGCCGCCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCTCGGCGGCAAAAGCCCTTGCTACTTGGACGGTACGGCCAATATCGCCATCGCCGCGCGGCGCATCTTGTGGGGCAAGTTTATAAACGCCGGCCAAACATGTATCGCTCCCGACTACATACTGTGCAGCAAGCAGGTGCAGAAGCAGTTCCTTGAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAA-GACAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTT-CCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCGGAGGTGAAACGGATCTGCAGGACCGTTACATCTCGCCAACAATTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTGGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAAACCACCGCCCCTAGTAATGTACATCTTTACGCTAGATACCAAAATTCAAGAATTTTCGTTACTGGAACACGGTCGGGCAGCATGTGTCTTAATGATACGATCATGCAGTATGCCGTTGAAGAACTG-CCTTCGGTGGTGTTGGCCCTAGCGGTATGGGTTCTTACCATGGCAAGTACTCCTTCGACACGTTCGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCCGATTGGCGAAAAACTGGCTGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCTGTCCTTCCTGAGTACCTTGCTGAAGAAGCGTCAGGGCATCAACTTGCACTTTTTGCCATATCTGCTGATGTTCGGTATTGGCGTGGCTTCTACGCTTGTAGTAAGCACCATCCTGAAGAGACGTTTGCAATAAACAACAGCTTCCATTCAGAGTTGGGGGATTTGGGTTATGAGAGGAACGTCATTCGACGTTAAATGATACGTCAGTTATGTGTGCATCTCAAGTGCACGTGCACCAAGCGTGCTCGTATTTCAATTGCGTTCTTTAGATTTTAATCATTGCTTACAACATGTATTCACACACATTGTACGTTATTATAGTGATGCTATTCAGCGCTGCTTGTGGGATCATTTAATAAAATATGAATATTTTGCACTTTCCATACG]
[+] EMBL CNS09F0L [GGGACGCATGTCGTAGGATCCATCGTACAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTACTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCTTCCTGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTTACGCTGGTGCCAGTGGCAGCCGCCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCTCGGCGGCAAAAGCCCTTGCTACTTGGACGGTACGGCCAATATCGCCATCGCCGCGCGGCGCATCTTGTGGGGCAAGTTTATAAACGCCGGCCAAACATGTATCGCTCCCGACTACATACTGTGCAGCAAGCAGGTGCAGAAGCAGTTCCTTGAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAA GACAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTT CCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCGGAGGTGAAACGGATCTGCAGGACCGTTACATCTCGCCAACAATTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTGGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAAACCACCGCCCCTAGTAATGTACATCTTTACGCT ]
[-] EMBL CNS09F0M [ GTGCTGAACGAGTGGTTTGGCGCGAATCCGAAGGACAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTTCCCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCGGAGGTGAAACGGATCTGCAGGACCGTTACATCTCGCCAACAATTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTGGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAAACCACCGCCCCTAGTAATGTACATCTTTACGCTAGATACCAAAATTCAAGAATTTTCGTTACTGGAACACGGTCGGGCAGCATGTGTCTTAATGATACGATCATGCAGTATGCCGTTGAAGAACTG CCTTCGGTGGTGTTGGCCCTAGCGGTATGGGTTCTTACCATGGCAAGTACTCCTTCGACACGTTCGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCCGATTGGCGAAAAACTGGCTGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCTGTCCTTCCTGAGTACCTTGCTGAAGAAGCGTCAGGGCATCAACTTGCACTTTTTGCCATATCTGCTGATGTTCGGTATTGGCGTGGCTTCTACGCTTGTAGTAAGCACCATCCTGAAGAGACGTTTGCAATAAACAACAGCTTCCATTCAGAGTTGGGGGATTTGGGTTATGAGAGGAACGTCATTCGACGTTAAATGATACGTCAGTTATGTGTGCATCTCAAGTGCACGTGCACCAAGCGTGCTCGTATTTCAATTGCGTTCTTTAGATTTTAATCATTGCTTACAACATGTATTCACACACATTGTACGTTATTATAGTGATGCTATTCAGCGCTGCTTGTGGGATCATTTAATAAAATAT ]
[+] EMBL BM645214 [ ccgTGCCGTTGAAGCACTGCCCTTCGGTGGTGTTGGCCCTAGCGGTATGGGTTCTTACCATGGCAAGTACTCCTTCGACACGTTCGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCCGATTGGCGAAAAACTGGCTGCCTCCCGGTATCCACCATACTCCGAAAGTAAGTTGTCCTTCCTGAGTACCTTGCTGAAGAAGCGTCAGGGCATCAACTTGCACTTTTTGCCATATCTGCTGATGTTCGGTATTGGCGTGGCTTCTACGCTTGTAGTAAGCACCATCCTGAAGAGACGTTTGCAATAAACAACAGCTTCCATTCAGAGTTGGGGGATTTGGGTTATGAGAGGAACGTCATTCGACGTTAAATGATACGTCGGTTA TGTGCATCTCAAGTGCACGTGCACCAAGCGTGCTCGTATTTCAATTGCGTTCTTTAGATTTTAATCATTGCTTACAACATGTATTCACACACATTGTACGTTATTATAGTGATGCTATTCAGCGCTGCTTGTGGGATCATTTAATAAAATATGAATATTTTGCACTTTCCATACG]
consensusID : consensus_9338#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1283 fasta sequence
[CGACCCACGCGTCCGGTGCGTTCGCTGGAACAGAAGCAGAAGCTCGGCTCGCCGCGTGTTCGAATACAGTACAGTGTGTGCTCGTACATTCCCATTTTGCTGTGCTTTCAGGATCCATCGTACCAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCATCCTGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTTACGCTGGTGCCAGTGGCAGCCGCCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCGAGGTAGCTCCGGCCTCGGCCAAATTCATCGCCGAAACACTGCCAAAGTACTTGTCTCAGGACTGCTACCGGGTGGTAACTGGTGGACCGAAGGAAACGAGCGAGCTGCTGAAAGAAAAGTTCGACTACGTGTTCTATACCGGTTCCGGACGCGTCGGCAAAATCATCCACCAGGCGTGCAGTGAAAACCTGACGCCCTGCACACTGGAGCTCGGCGGCAAAAGCCCTTGCTACTTGGACGGTACGGCCAATATCGCTATCGCCGCGCGGCGCATCTTGTGGGGCAAGTTTATAAACGCCGGCCAAACATGTATCGCTCCCGACTACATACTGTGCAGCAAGCAGGTGCAGAAGCAGTTCCTTGAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAAGGACAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTTCCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCGGAGGAGAAACGGATCTGCAGGACCGTTACATCTCGCCAACTATTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTCGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGTGCCAAGCCTCTATGCTTGTACATCTTCTCCAAAAACGTAACGGATCAGCGTCTGATGATCGAAAACACCTCCAGC]
[+] EMBL BM622174 [CGACCCACGCGTCCGGTGCGTTCGCTGGAACAGAAGCAGAAGCTCGGCTCGCCGCGTGTTCGAATACAGTACAGTGTGTGCTCGTACATTCCCATTTTGCTGTGCTTTCAGGATCCATCGTACCAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCATCCTGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTTACGCTGGTGCCAGTGGCAGCCGCCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCGAGGTAGCTCCGGCCTCGGCCAAATTCATCGCCGAAACACTGCCAAAGTACTTGTCTCAGGACTGCTACCGGGTGGTAACTGGTGGACCGAAGGAAACGAGCGAGCTGCTGAAAGAAAAGTTCGACTACGTGTTC ]
[+] EMBL BM588536 [ CCGGTGCGTTCGCTGGAACAGAAGCAGAAGCTCGGCTCGCCGCGTGTTCGAATACAGTACAGTGTGTGCTCGTACATTCCCATTTTGCTGTGCTTTCAGGATCCATCGTACCAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCATCCTGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTTACGCTGGTGCCAGTGGCAGCCGCCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCGAGGTAGCTCCGGCCTCGGCCAAATTCATC ]
[+] EMBL BM621724 [ GTGCGTTCGCTGGAACAGAAGCAGAAGCTCGGCTCGCCGCGTGTTCGAATACAGTACAGTGTGTGCTCGTACATTCCCATTTTGCTGTGCTTTCAGGATCCATCGTACCAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTTGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCATCCTGAACGATCTGCGGAACACGCTGTACAACTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGTGTCTACATCTACAAGGACCCGTACG ]
[+] EMBL BM630164 [ cgacccacGCGTCCGCTGGAACAGAAGCAGAAGCTCGGCTCGCCGCGTGTTCGAATACAGTACAGTGTGTGCTCGTACATTCCCATTTTGCTGTGCTTTCGGGATCCATCGTACCAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTTGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCATCCTGAACGATCTGCGGAACACGCTGTACAACTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGTGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCG ]
[+] EMBL BM625188 [ ccgGCAGAAGCTCGGCTCGCCGCGTGTTCGAATACAGTACAGTGTGTGCTCGTACATTCCCATTTTGCTGTGCTTTCAGGATCCATCGTACCAGATTATATCAACATGAGTTTTTCGGACATCGTTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCATCCTGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCGCGTG ]
[+] EMBL BM611693 [ ccgGCGAGATGTCGATTTCAGGTTGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGCTTGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCATCCTGAACGATCTGCGGAACACGCTGTACAACTTGCGCGAATGGGTGAAGCCGGAAAAGCCGGAGAAGAGCCTGGTTAACGTGATGGATGGTGTCTACATCTACAAGGACCCGTACGGTGTGGTGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTAACGCTGGTGCCAGTGGCAGCTGCCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCGAGGTAGCTCCGGCCTCGGCCAAATTCATCGCCGAAACACTGCCAAAGTACTTGTCTCAGGACTGCTACCGGGTGGTAACTGGTGGACCGAAGGAAACGAGCGAGCTGCTGAAGGAAAAGTTCGACTACGTGTTCTATACCGGTTCCGGACGCGTCGGCAAAATCATCCACCAGGCGTGCAGTGAAAACCTGACGCCCTGCACACTGGAGCTCGGCGGCAAAAGCCCTTGCTACTTGGACGGTACGGCCAATATCGCTATCGCCGCGCGGCGCATCTTGTGGGGCAAGTTTATAAACGCCGG ]
[+] EMBL BM638918 [ ccgGGCCAATATCGCTATCGCCGCGCGGCGCATCTTGTGGGGCAAGTTTATAAACGCCGGCCAAACATGTATCGCTCCCGACTACATACTGTGCAGCAAGCAGGTGCAGAAGCAGTTCCTTGAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAAGGACAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTTCCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCGGAGGAGAAACGGATCTGCAGGACCGTTACATCTCGCCAACTATTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTCGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGTGCCAAGCCTCTATGCTTGTACATCTTCTCCAAAAACGTAACGGATCAGCGTCTGATGATCGAAAACACCTCCAGC]
consensusID : consensus_9338#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1059 fasta sequence
[GAATCCCCCGAGGNNCATCGGAGGTGAAACGGATCTGCAGGACGTTACATCTCGCCAACAACTTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTCGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGAGACAAACCACTATGTTTGTACTTATTTACTGAAAACATCGAGGATCGCGATGCCTTCATAGCAAACACTTCTAGCGGAGGTGTTTGCGTGAATGATGCTTTAACGCACTTTGCAGTTGAAGCACTGCCCTTCGGTGGTGTTGGCCCTAGCGGTATGGGTTCTTACCATGGCAAGTACTCCTTCGACACGTTCGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCCGATTGGCGAAAAACTGGCTGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCTGTCCTTCCTGAGTACCTTGCTGAAGAAGCGTCAGGGCATCAACTT-GCACTTTTTGCCATATCTGCTGATGTTCGGCATTGGCGTGGCCTCTACGCTTGTAGTAAGCACCATCCTGAAGGATGACGA-TTAACGCTTTCA-GAAAGCAAAACA-CAATGACACCAA-TAACTATCACTATTGGCAG-AACGAAAC--AAAACA-ACGGAAAAACGGAAACATTATGCTCCGACAAGCTTTCCTTGCAACGCATACCGGAGAACGTGACGAGTCATTNGNCCCTTTTTTTTTATTAGAAGTTAGGTCAATTTGCAAATCTTTTGCTTGCAACAACACAATTGTGATGGGATTATTCCAACACCACTAACTTCTTCCGGTGCGGGGAGAATAGAAAGGTGAAAAGGGACAAGGAGCTAAAAATGATGCCGAAAAATGTGTTTTAATTTTCCATGCACGGTGATACACGTCTTTTACACTTTGGCGAAGCAGCGTTATCAACACGGTTTATGTTTTAAATGTAAAAAAATGAAACTAGAAAATGTACGTTTATCGTGGATAAGAACAGCACAAGAAAAAATGTTGGGTGCATGCAATAAATGGTGATAA]
[+] EMBL AL933144 [GAATCCCCCGAGGNNCATCGGAGGTGAAACGGATCTGCAGGACGTTACATCTCGCCAACAACTTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTCGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGAGACAAACCACTATGTTTGTACTTATTTACTGAAAACATCGAGGATCGCGATGCCTTCATAGCAAACACTTCTAGCGGAGGTGTTTGCGTGAATGATGCTTTAACGCACTTTGCAGTTGAAGCACTGCCCTTCGGTGGTGTTGGCCCTAGCGGTATGGGTTCTTACCATGGCAAGTACTCCTTCGACACGTTCGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCCGATTGGCGAAAAACTGGCTGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCTGTCCTTCCTGAGTACCTTGCTGAAGAAGCGTCAGGGCATCAACTTGGCACTTTTTGCCATATCTGCTGATGTTCGGCATTGGCGTGGCCTCTACGCTTGTAGTAAGCACCATCCTGAAGGATGACGATTTAACGCTTTCAGGAAAGCAAAACANCAATGACACCAANTAACTATCACTATTGGCAGAAACGAAACCAAAAACACACGGAAAAACGGAAACATTATGCTCCGACAAGCTTTCCTTGCAACGCATACCGGAGAACGTGACGAGTCATTNGNCC ]
[+] EMBL BX610525 [ ACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGAGACAAACCACTATGTTTGTACTTATTTACTGAAAACATCGAGGATCGCGATGCCTTCATAGCAAACACTTCTAGCGGAGGTGTTTGCGTGAATGATGCTTTAACGCACTTTGCAGTTGAAGCACTACCCTTCGGTGGTGTTGGCCCTAGCGGTATGGGTTCTTACCATGGCAAGTACTCCTTCGACACGTTCGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCCGATTGGCGAAAAACTGGCTGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCTGTCCTTCCTGAGTACCTTGCTGAAGAAGCGTCAGGGCATCAACTT GCACTTTTTGCCATATCTGCTGATGTTCGGCATTGGCGTGGCCTCTACGCTTGTAGTAAGCACCATCCTGAAGGATGACGA TTAACGCTTTCA GAAAGCAAAACA CAATGACACCAA TAACTATCACTATTGGCAG AACGAAAC AAAACA A ]
[+] EMBL BX610526 [ CTTATGTACTGAAAACATCGAGGAACGCGATGCCTTCATAGCAAACACTTCTAGCGGAGGTGTTTGCGTGAATGATGCTTTAACGCACTGGGCAGTGGAAGC ]
[+] EMBL BM583372 [ ccgACCCGATTGGCGAAAAACTGGCTGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCTGTCCTTCCTGAGTACCTTGCTGAAGAAGCGTCAGGGCATCAACTT GCACTTTTTGCCATATCTGCTGATGTTCGGTATTGGCGTGGCTTCTACGCTTGTAGTAAGCACCATCCTGAAGGATGACGA TTAACGCTTTCA GAAAGCAAAACA CAATGGCACCAA TAACTATCACTATTGGCAG AACGAAAC AAAACA ACGG AAAACGGAAAAATTATGCTCCGACAAGCTTTCC TGCAACGCATACCGGAGAACGTGACGAGTCATTTGTTTCTTTTTTTTTATTAGAAGTTAGGTCAATTTGCAAATCTTTTGCTTGCAACAACACAATTGTGATGGGATTATTCCAACACCACTAACTTCTTCCGGTGCGGGGAGAATAGAAAGGTGAAAAGGGACAAGGAGCTAAAAATGATGCCGAAAAATGTGTTTTAATTTTCCATGCACGGTGATACACGTCTTTTACACTTTGGCGAAGCAGCGTTATCAACACGGTTTATGTTTTAAATGTAAAAAAATGAAACTAGAAAATGTACGTTTATCGTGGATAAGAACAGCACAAGAAAAAATGTTGGGTGCATGCAATAAATGGTGATAA]
consensusID : consensus_9338#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 798 fasta sequence
[CGCAGGTTCAGCAGCAGTGCAGAAGCAGTTCCTTTAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAAGGACAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTTCCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCGGAGGTGAAACGGATCTGCAGGACCGTTACATCTCGCCAACAATTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTCGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGACCACCGCCCCTAGTAATGTACATCTTTACGCTAATACCAAAATTCAAGCAACTTTCTCGTTACTGGCAACACGGTCNCGGCACCACTGTGTCTTAACTGATACNATCATGCATATGCCGTTGAAGCACTGNCCTTCGAGATGGTGTTAGGCCCTAGCGGTATGGNTTCTTACCATGGCAAGTACTCCTTACGACANGTTCAGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCGATTGGCGAACAAACTTGGGCTGCTCCCGGTATCCACCAATAACTCCGAAAAGTACAGCTGNACTTTCCATGCAGATAACCTTTGGCTGAAAGCAAGCGCTCAGGGCATCACAACTTTGCACATTGTCNATGGACCATATCNTGCATGAATGTCCGNGNATTAGGGTGGGCCTCTACGCTATGTAGATAAAGANCCAATCCTTGAAANGGATGACCGCAAAAACAACTATCAANA]
[+] EMBL AL695267 [CGCAGGTTCAGCAGCAGTGCAGAAGCAGTTCCTTTAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAAGGACAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTTCCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCGGAGGTGAAACGGATCTGCAGGACCGTTACATCTCGCCAACAATTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCCCCATTCTGCCGATTCTGAATGTCGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGACCACCGCCCCTAGTAATGTACATCTTTACGCTAATACCAAAATTCAAGCAACTTTCTCGTTACTGGCAACACGGTCNCGGCACCACTGTGTCTTAACTGATACNATCATGCATATGCCGTTGAAGCACTGNCCTTCGAGATGGTGTTAGGCCCTAGCGGTATGGNTTCTTACCATGGCAAGTACTCCTTACGACANGTTCAGTCCACAAGAAGTCCTGCTTGACGAAAGATTTCAACCGATTGGCGAACAAACTTGGGCTGCTCCCGGTATCCACCAATAACTCCGAAAAGTACAGCTGNACTTTCCATGCAGATAACCTTTGGCTGAAAGCAAGCGCTCAGGGCATCACAACTTTGCACATTGTCNATGGACCATATCNTGCATGAATGTCCGNGNATTAGGGTGGGCCTCTACGCTATGTAGATAAAGANCCAATCCTTGAAANGGATGACCGCAAAAACAACTATCAANA]
consensusID : consensus_9338#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 215 fasta sequence
[CACTCCGCAGTGGAAGCACTACCCTTCGGTGGGGTGGGCCCTAGCGGAATGGGTCCTAACCATGGCAAGAACTCCTTCGACACGTTCGTCCACAAGAAGTCCGGCTGGACGAAAGAATCCAACCCGATGGGCGAAAAACTGGCGGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCGGTCCTCCCTGAGAACCTGGCTGAAGAAGCGTCAGGG]
[+] EMBL BX610893 [CACTCCGCAGTGGAAGCACTACCCTTCGGTGGGGTGGGCCCTAGCGGAATGGGTCCTAACCATGGCAAGAACTCCTTCGACACGTTCGTCCACAAGAAGTCCGGCTGGACGAAAGAATCCAACCCGATGGGCGAAAAACTGGCGGCCTCCCGGTATCCACCATACTCCGAAAGTAAGCGGTCCTCCCTGAGAACCTGGCTGAAGAAGCGTCAGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 GGGACGCATGTCGTAGGATCCATCGTACAGATTATATCAACATGAGTTTTTCGGACATCG 60
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 TTCAACAGCTGCGAACTACATTCAACAGTGGCAAAACGCGAGATGTCGATTTCAGGTTGA 120
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 ATCAGCTGAAGGCCCTACTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACGTGC 180
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 TAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCTTCC 240
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 TGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGCCGG 300
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 AGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTGTGG 360
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 TGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTTACGCTGGTGCCAGTGGCAGCCG 420
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 CCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCTCGGCGGCAAAAGCCCTTGCTA 480
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 CTTGGACGGTACGGCCAATATCGCCATCGCCGCGCGGCGCATCTTGTGGGGCAAGTTTAT 540
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------CGCAGGTTCAGCAGCAGTGCAGAA 24
consensus_9338#0 AAACGCCGGCCAAACATGTATCGCTCCCGACTACATACTGTGCAGCAAGCAGGTGCAGAA 600
consensus_9338#1 ------------------------------------------------------------
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 GCAGTTCCTTTAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAAGGA 84
consensus_9338#0 GCAGTTCCTTGAGGAGGCCCGCAAAGTGCTGAACGAGTGGTATGGCGCGAATCCGAAG-A 659
consensus_9338#1 ------------------------CGACCCACGCGTCCGGTGCGTTCGCTGGAACAGAAG 36
consensus_9338#2 ------------------------------------------------------------
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 CAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTTCCAGCGACTTACGTCTCTGCT 144
consensus_9338#0 CAGTCCCGATCTGTGCCGCATTATCAACCAGAATCATTTCCAGCGACTTACGTCTCTGCT 719
consensus_9338#1 CAGAAGCTCGGCTCGCCGCGTGTTCGAATACAGTACAGTGTGTGCTCGTACATTCCCATT 96
consensus_9338#2 ---GAATCCCCCGAGGNNCATCGGAGGTGAAACGGATCTGCAGGAC-GTTACATCTCGCC 56
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 CAAGGGTGCCAACGTGGCCATCGGAGGTGAAACGGATCTGCAGGACCGTTACATCTCGCC 204
consensus_9338#0 CAAGGGTGCCAACGTGGCCATCGGAGGTGAAACGGATCTGCAGGACCGTTACATCTCGCC 779
consensus_9338#1 TTGCTGTGCTTTCAGGATCCATCGTACCAGATTATATCAACATGAGTTTTTCGGACATCG 156
consensus_9338#2 AACAACTTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCC 116
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 AACAA-TTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCC 263
consensus_9338#0 AACAA-TTCTGATCGACGTAAAGTCAACTGATCCCGTAATGCAGGATGAAATTTTTGGCC 838
consensus_9338#1 TTCAACAGCTG--CGAACTACATTCAACAG-TGGCAAAACGCGAGATGTCGATTTCAGGT 213
consensus_9338#2 CCATTCTGCCGA------TTCTGAATGTCGACAATGCGTATGATGCCAT-----CAAGTT 165
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 CCATTCTGCCGA------TTCTGAATGTCGACAATGCGTATGATGCCAT-----CAAGTT 312
consensus_9338#0 CCATTCTGCCGA------TTCTGAATGTGGACAATGCGTATGATGCCAT-----CAAGTT 887
consensus_9338#1 TGAATCAGCTGAAGGCCCTGCTACGATGCTACGAAGAGAACACAGCCGAGATGGCGAACG 273
consensus_9338#2 CATCAACTCCAGAGACAAAC---CACTATGTTTGTACTTATTTACTGAAAACATCGAGGA 222
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 CATCAACTCCAGACCACCGC---CCCTAGTAATGTACATCTTTAC-GCTAATACCAAAAT 368
consensus_9338#0 CATCAACTCCAAACCACCGC---CCCTAGTAATGTACATCTTTACGCTAGATACCAAAAT 944
consensus_9338#1 TGCTAGCCGCGGATCTCCGCAAGCACAAGCAGGAAGCCCATCTGCTCGAGATTGAGTTCA 333
consensus_9338#2 TCGCGATGCCTTCA------TAGCAA-ACACTTCTAGCGGAGGTGTTTGCGTGAATGATG 275
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 TCAAGCAACTTTCTCGTTACTGGCAACACGGTCNCGGCACCACTGTGT-CTTAACTGATA 427
consensus_9338#0 TCAAGAATTTTCGT------TACTGGAACACGGTCGG--GCAGCATGTGTCTTAATGATA 996
consensus_9338#1 TCCTGAACGATCTGCGGAACACGCTGTACAATTTGCGCGAATGGGTGAAGCCGGAAAAGC 393
consensus_9338#2 CTTTAACGCACTTTGC--AGTTGAAGCACTGCCCTTCGG--TG---GTGTT-GGCCCTAG 327
consensus_9338#4 --------CACTCCGC--AGTGGAAGCACTACCCTTCGG--TG---GGGTG-GGCCCTAG 44
consensus_9338#3 CNATCATGCA-TATGC--CGTTGAAGCACTGNCCTTCGAGATG---GTGTTAGGCCCTAG 481
consensus_9338#0 CGATCATGCAGTATGC--CGTTGAAGAACTGCC-TTCGG--TG---GTGTT-GGCCCTAG 1047
consensus_9338#1 CGGAGAAGAGCCTGGTTAACGTGATGGATGGCGTCTACATCTACAAGGACCCGTACGGTG 453
* ** * * * * * * * *
consensus_9338#2 CGGTATGGGTTCTTACCATG-GCAAGTACTCCTT-CGAC--ACGTTC-GTCCACAAGAAG 382
consensus_9338#4 CGGAATGGGTCCTAACCATG-GCAAGAACTCCTT-CGAC--ACGTTC-GTCCACAAGAAG 99
consensus_9338#3 CGGTATGGNTTCTTACCATG-GCAAGTACTCCTTACGAC--ANGTTCAGTCCACAAGAAG 538
consensus_9338#0 CGGTATGGGTTCTTACCATG-GCAAGTACTCCTT-CGAC--ACGTTC-GTCCACAAGAAG 1102
consensus_9338#1 TGGTGCTGGTGATCGGCGCGTGGAACTATCCGCTGCAGCTTACGCTGGTGCCAGTGGCAG 513
** * * * * * * ** * * * * * * * * *** * **
consensus_9338#2 TCCTGCTTGACGAAAGA-------TTTCAACCCGATTG-GCGAA-AAACT--GGCTGCCT 431
consensus_9338#4 TCCGGCTGGACGAAAGA-------ATCCAACCCGATGG-GCGAA-AAACT--GGCGGCCT 148
consensus_9338#3 TCCTGCTTGACGAAAGA-------TTTCAACC-GATTG-GCGAACAAACTTGGGCTGC-T 588
consensus_9338#0 TCCTGCTTGACGAAAGA-------TTTCAACCCGATTG-GCGAA-AAACT--GGCTGCCT 1151
consensus_9338#1 CCGCCATTGCCGCAGGAAACTGTGTCGTAATTAAACCGAGCGAGGTAGCTCCGGCCTCGG 573
* * * ** * ** ** * * **** * ** *** *
consensus_9338#2 CCCGGT--ATCCACCAT--ACTCCGAAA----GTA-AGCTGTCCTTCCT-----GAGTAC 477
consensus_9338#4 CCCGGT--ATCCACCAT--ACTCCGAAA----GTA-AGCGGTCCTCCCT-----GAGAAC 194
consensus_9338#3 CCCGGT--ATCCACCAATAACTCCGAAAA---GTACAGCTGNACTTTCCATGCAGATAAC 643
consensus_9338#0 CCCGGT--ATCCACCAT--ACTCCGAAA----GTA-AGCTGTCCTTCCT-----GAGTAC 1197
consensus_9338#1 CCAAATTCATCGCCGAAACACTGCCAAAGTACTTGTCTCAGGACTGCTACCGGGTGGTAA 633
** * *** * * *** * *** * * * ** *
consensus_9338#2 CTT----GCTGAAG--AAGCG-TCAGGGCATCAACTTGCACTTTTTGCCATATCTGCTGA 530
consensus_9338#4 CTG----GCTGAAG--AAGCG-TCAGGG-------------------------------- 215
consensus_9338#3 CTTT--GGCTGAAAGCAAGCGCTCAGGGCATCA-----CAACTTTGCACATTGTCNATGG 696
consensus_9338#0 CTT----GCTGAAG--AAGCG-TCAGGGCATCAACTTGCACTTTTTGCCATATCTGCTGA 1250
consensus_9338#1 CTGGTGGACCGAAGG-AAACGAGCGAGCTGCTGAAAGAAAAGTTCGACTACGTGTTCT-A 691
** * *** ** ** * *
consensus_9338#2 TGTTCGGCATTGGCGTGGCCTCTACGCTTGTAGTAAGCACCATCCTGAAG----GATG-- 584
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ACCATATCNTGCATGAATGTCCGNGNATTAGGGTGGGCCTCTACGCTATGTA--GATA-- 752
consensus_9338#0 TGTTCGGTATTGGCGTGGCTTCTACGCTTGTAGTAAGCACCATCCTGAAGAGACGTTT-- 1308
consensus_9338#1 TACCGGTTCCGGACGCGTCGGCAAAATCATCCACCAGGCGTGCAGTGAAAACCTGACGCC 751
consensus_9338#2 ----ACGATTAAC----GCTTTCAGAAAGCAAAACACAATGACA--CCAATAACTATCAC 634
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ----AAGANCCAA----TCCTTGAAANGGATGACCGCAAAAACA--ACTATCAANA---- 798
consensus_9338#0 ----GCAATAAACAACAGCTTCCATTCAGAGTTGGGGGATTTGG--GTTATGAGAGGAAC 1362
consensus_9338#1 CTGCACACTGGAGCTCGGCGGCAAAAGCCCTTGCTACTTGGACGGTACGGCCAATATCGC 811
consensus_9338#2 TATTGGCAGAACGAAACAAAACAACGGAAAAACGGAAACATTATGCTCCGACAAGCTTTC 694
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 GTCATTCGACGTTAAATGATACGTCAGTTATGTGTGCATCTCAAGTGCACGTGCACCAAG 1422
consensus_9338#1 TATCGCC-GCGCGGCGCATCTTGTGGGGCAAGTTTATAAACGCCGGCCAAACATGTATCG 870
consensus_9338#2 CTTGCAAC-GCATACCGGAGAACGTGACGAGTCATTNGNCCCTTTTTTTTTA--TTAGAA 751
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 CGTGCT-C-GTATTTCAATTGCGTTCTTTAG--ATTTTAATCATTGCTTACA--ACATGT 1476
consensus_9338#1 CTCCCGACTACATACTGTGCAGCAAGCAGGTGCAGAAGCAGTTCCTTGAGGAGGCCCGCA 930
consensus_9338#2 GTTAGGTCAATTTGCAAATCTTTTGCTTGCAACAACACAATTGTG---ATGGGATTATTC 808
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 ATTCACACACATTGTACGTTATTATAGTGATGCTATTCAGCGCTGCTTGTGGGATCATTT 1536
consensus_9338#1 AAGTGCTGAACGAGTGGTATGGCGCGAATCCGAAGGACAGTCCCGATCTGTGCCGCATTA 990
consensus_9338#2 CA-ACACCACTAACTTCTTCCGGTGCGGGGA---GAATAGAAAGGTGAAAAGGGACAAGG 864
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 AATAAAATATGAATATTTTGCACTTTCCATA---CG------------------------ 1569
consensus_9338#1 TCAACCAGAATCATTTCCAGCGACTTACGTCTCTGCTCAAGGGTGCCAACGTGGCCATCG 1050
consensus_9338#2 AGCTAAAAATGATGCCGAAAAATGTGTTTTAATTTTCCATGCACGGTGATACACGTCTTT 924
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 ------------------------------------------------------------
consensus_9338#1 GAGGAGAAACGGATCTGCAGGAC-CGTTACATCTCGCCAACTATTCTGATCGACGTAAAG 1109
consensus_9338#2 TACACTTTGGCGAAGCAGCGTTATCAACACGGTTTATGTTTTAAATGTAAAAAAATGAAA 984
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 ------------------------------------------------------------
consensus_9338#1 TCAACTGATCCCGTAATGCAGGATGAA---ATTTTTGGCCCCATTCTGCCGATTCTGAAT 1166
consensus_9338#2 CTAGAAAATGTACGTT-TATCGTGGATAAGAACAGCACAAGAAAAAATGTTGGGTGCATG 1043
consensus_9338#4 ------------------------------------------------------------
consensus_9338#3 ------------------------------------------------------------
consensus_9338#0 ------------------------------------------------------------
consensus_9338#1 GTCGACAATGCGTATGATGCCATCAAGTTCATCAACTCCAGTGCCAAGCCTCTATGCTTG 1226
consensus_9338#2 CAATAAATGGTGATAA----------------------------------------- 1059
consensus_9338#4 ---------------------------------------------------------
consensus_9338#3 ---------------------------------------------------------
consensus_9338#0 ---------------------------------------------------------
consensus_9338#1 TACATCTTCTCCAAAAACGTAACGGATCAGCGTCTGATGATCGAAAACACCTCCAGC 1283
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||