These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9358#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1678 fasta sequence [CCGCCCACGCGTCCGTGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCGGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTACGCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC-TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG-AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG-CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGAT-CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC-TGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGCGGTGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGCGTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAGAAAAAAAAACATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGAGGAGGCCGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCACCTTCACCCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAATAACATAT-AAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCACAGTGAAGAGAGGAAGCAAAA--AAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGAGAACAAGACAGCCATATTTGTTTGTTTAACACCACCACATTGGTCAATG] [+] EMBL BM622816 [CCGCCCACGCGTCCGTGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCGGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTACGCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGCTTTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCGTAAAGCCAGATC ] [+] EMBL BX619015 [ TACGGTGTCTGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTACGCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAAAATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCATGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGGCACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTGACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCca ] [+] EMBL BM618530 [ cCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGATCCCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGCTTGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGT ] [+] EMBL BX623582 [ CTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTGACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC TGGTCCGGCGGGAGCGCAACCAGTT CATCTGCAGGTCGATTCGCTGACGGTGCACGGTG ] [+] EMBL BM630053 [ ccgAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC TGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGCGGTGTTCCGGACG ] [+] EMBL BM595491 [ cCGGTCCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC TGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGCGGTGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGCGTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAGAAAAAAAAACATACAAAATAAACCACCCAATTCTTCCAACGAGCGGAGGGAGGAGGAGGCCGCAGGAGCTTCTCGCTATGGGGCCATCAACGAAACAGCGGTACCCACCTTCACCCAACAAAAGGATGAACCGCTCTAAAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGG ] [+] EMBL BM590386 [ ccgGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGCGTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAG AAAAAAGCATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGAGGAGGCTGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCACCTTCACCCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAATAACATAT AAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCACAGTGAAGAGAGGAAGCAAAATGAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGAGAACAAGACAGCCATATTTGTTTGTTTAACACCACCACATTGGTCAATG] [-] EMBL AGA281046 [ TCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAGAAAAAAAAACATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGAGGAGGCCGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCAACTTCACCCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAATAACATATAAAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCACAGTGAAGAGAGGAAGCAAAA AAAA ] consensusID : consensus_9358#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 788 fasta sequence [GCCCCGAGGTTTAATACTANNACTGTATCGTATACCTATAGAGAAGCGCAAACGAA-TGCACA-G-TGAA-GAGGGGAAGCAAAATGAAAA-AACACGCGTACA-GTAACGAACAACG-AATGTGCCAA-ATAAATGTAGTATTTATGTAAAA---AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTT-TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG-GTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT-GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGGTCTTCATTTCTATACACTAAGTGCTTTCGATATGTTAAAAAAAAACACGAAGATACGAGCAAAACAGATAGGAGAGATTAAATCAAACGATGTTGAACATAATGTAGCCCTT] [+] EMBL AL932118 [GCCCCGAGGTTTAATACTANNACTGTATCGTATACCTATAGAGAAGCGC AACGAACTGCACACGCTGAANNAGGGGAAGCAAAATGAAAANAACACGCGTACAGGTAACGAACAACGCAATGTGCCAACATAAATGTAGTATTTATGTAACANCCAACCGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTCTAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG GTTTTTCTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTTCGTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAG ] [+] EMBL BX625071 [ TGTATCGTATACCTATAGAGAAGCGCAAACGAA TGCACA G TGAA GAGGGGAAGCAAAATGAAAA AACACGCGTACA GTAACGAACAACG AATGTGCCAA ATAAATGTAGTATTTATGTAAAA AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTT TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG GTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGGTCTTCATTTCTATACACTAAGTGCTTTCGATATGTTAAAAAAAAACACGAAGATACGAGCAAAACAGATAGGAGAGATTAAATCAAACGATGTTGAACATAATGTAGCCCTT] [+] EMBL BX611398 [ AAGCGCAAACGAA TGCACA G TGAA GAGGGGAAGCAAAATGAAAA AACACGCGTACA GTAACGAACAACG AATGTGCCAA ATAAATGTAGTATTTATGTAAAA AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTT TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG GTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGGTCTTCATT ] [+] EMBL BX611254 [ ATGTAAAA AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGATAACAAGACAACCATATTTGTTTGTT TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGTTTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATATCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAAC ] consensusID : consensus_9358#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 603 fasta sequence [AAGCAAAATGAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACACCACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGGTTTTATTAGCACTGCCAACTTTCGTTCCCCACAAGATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAACCACTGCGCAGTGATTGTTTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTTGTTACTAGCCTTGTAATCTTGGCGGCATAAGCCAGTTTATGTTTTGAGCAAGAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGG] [+] EMBL BX609508 [AAGCAAAATGAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACACCACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGGTTTTATTAGCACTGCCAACTTTCGTTCCCCACAAGATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAACCACTGCGCAGTGATTGTTTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTTGTTACTAGCCTTGTAATCTTGGCGGCATAAGCCAGTTTATGTTTTGAGCAAGAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGG] [+] EMBL BX609620 [ GTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACACCACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGGTTTTATTAGCACTGCCAACTTTCGTTCCCCACAAGATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGT ] consensusID : consensus_9358#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 314 fasta sequence [GACAAATTCCAATCGAAACGAAGCATCCGCTTCCGCTTCAAGCCCGACTCGCTGGAGAATGGCATAATGTTCTATGCGGCGGAGCACGAGCAAGGATATGGAGATTTCATGGCCGTGCTGCTGAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCTGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGAT] [+] EMBL AGA282674 [GACAAATTCCAATCGAAACGAAGCATCCGCTTCCGCTTCAAGCCCGACTCGCTGGAGAATGGCATAATGTTCTATGCGGCGGAGCACGAGCAAGGATATGGAGATTTCATGGCCGTGCTGCTGAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCTGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGAT] consensusID : consensus_9358#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 254 fasta sequence [TTATTCGCATAGACAATTCCATCGAAACGAAGCATCGCTTTCGCTTCAGCCCGACTCGCTGGAGAATGGNATAATGTTCTATGCGGGGAGCACGAGCACGATATGAGATTTTCATGGCCGTGCTTGGCTGAAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAAGATGAAAACCACTGATCTGTACGATCGACCGTTACCGATCGAAGCGGGCCCGTGGCATACGGTGTCTGCGGGACGCACCAA] [+] EMBL AL932865 [TTATTCGCATAGACAATTCCATCGAAACGAAGCATCGCTTTCGCTTCAGCCCGACTCGCTGGAGAATGGNATAATGTTCTATGCGGGGAGCACGAGCACGATATGAGATTTTCATGGCCGTGCTTGGCTGAAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAAGATGAAAACCACTGATCTGTACGATCGACCGTTACCGATCGAAGCGGGCCCGTGGCATACGGTGTCTGCGGGACGCACCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 -----------------------------------------------------------T 1 consensus_9358#0 ------------------------------------------------------------ consensus_9358#1 GCCCCGAGGTTTAATACTANNACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCA 60 consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 --------GACAAATTCCAATCGAAACGAAGCATCCGCTTCCGCTTCAAGCCCGACTCGC 52 consensus_9358#4 TATTCGCATAGACAATTCCATCGAAACGAAGCATC-GCTTTCGCTTCA-GCCCGACTCGC 59 consensus_9358#0 ------------------------------------------------------------ consensus_9358#1 CAGTGAAGAGGGGAAGCAAAATGAAAAAACACGCGTACAGTAACGAACAACGAATGTGCC 120 consensus_9358#2 ------AAGCAAAATGAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCC 54 consensus_9358#3 TGGAGAATGGCATAATGTTCTATGCGGC-GGAGCACGAGCAAGGATATGGAGATTTCATG 111 consensus_9358#4 TGGAGAATGGNATAATGTTCTATGCGG--GGAGCACGAGCACG-ATATGAGATTTTCATG 116 consensus_9358#0 ------------------------------------------------------------ consensus_9358#1 AAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACA 180 consensus_9358#2 AAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACA 114 consensus_9358#3 GCCG-TGCT--GCTGAA-CAATGGTTTCGTTGAAATACGCTACAGTG--TAGCTGGAAA- 164 consensus_9358#4 GCCG-TGCTTGGCTGAAACAATGGTTTCGTTGAAATACGCTACAGTG--TAGCTGGAAAA 173 consensus_9358#0 -CCG-CCCA----CGCGTCCGTGGTTTCGTTGAAATACGCTACAGTG--TAGCTGGAAA- 51 consensus_9358#1 GTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACAC 240 consensus_9358#2 GTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACAC 174 * * * * * ** * * * * * * * * * consensus_9358#3 GATGAAA-CCACTGAT-C-GTACG-ATCGACCGT-AC-CGATCGAGGCGGGCCAGTGGCA 218 consensus_9358#4 GATGAAAACCACTGAT-CTGTACG-ATCGACCGTTAC-CGATCGAAGCGGGCCCGTGGCA 230 consensus_9358#0 GATGAAA-CCACTGAT-C-GTACG-ATCGACCGT-AC-CGATCGAGGCGGGCCAGTGGCA 105 consensus_9358#1 CACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAG 300 consensus_9358#2 CACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAG 234 * * * ** * ** ** * * ** * ** ** * * * consensus_9358#3 TACGGTGTCTGCGGGACG--CACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAG 276 consensus_9358#4 TACGGTGTCTGCGGGACG--CACCAA---------------------------------- 254 consensus_9358#0 TACGGTGTCGGCGGGACG--CACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAG 163 consensus_9358#1 AACCACGT-GGCGATACGTGCACTAAGGTTTTTTTTAGCA--CTGCCAACTTTCGTTTCC 357 consensus_9358#2 AACCACGT-GGCGATACGTGCACTAAGGTTTTATT-AGCA--CTGCCAACTTTCGTTCCC 290 ** ** *** *** *** ** consensus_9358#3 GCCGTCAACAACGAGATGTCCAACCGCAACACGCCGAT---------------------- 314 consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTAC 223 consensus_9358#1 CACAACA-TATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACAC-TGT 415 consensus_9358#2 CACAAGA-TATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACAC-TGT 348 consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTT 283 consensus_9358#1 GATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAA 475 consensus_9358#2 GATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAA 408 consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATT 343 consensus_9358#1 CCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACC 535 consensus_9358#2 CCACTGCGCAGTGATTGTTTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACC 468 consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 CGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATC 403 consensus_9358#1 ATCTTGTTGTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGA 595 consensus_9358#2 ATCTTGTTGTTACTAGCCT-----TGTAATCTTGGCGGCATAAGCCAGTTTATGTTTTGA 523 consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTT 463 consensus_9358#1 GCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCA 655 consensus_9358#2 GCAAGA-GTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCA 582 consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 ACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCG 523 consensus_9358#1 ACTAACTGCCCGCTGTAATGGTCTTCATTTCTATACACTAAGTGCTTTCGATATGTTAAA 715 consensus_9358#2 ACTAACTGCCCGCTGTAATGG--------------------------------------- 603 consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACC 583 consensus_9358#1 AAAAAACACGAAGATACGAGCAAAACAGATAGGAGAGATTAAATCAAACGATGTTGAACA 775 consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 CAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGCTTCATCGAGGTCAGCCCG 643 consensus_9358#1 TAATGTAGCCCTT----------------------------------------------- 788 consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 AAGGCGTTCAAGCACAGCGAAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCG 703 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 TACGAGCCGAACGGGCTGCTGATCTGGTACGGCCAGCGCAACGGTGAGGAGTTCCTCGGC 763 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 AACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGATCCGCATGGAC 823 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTG 883 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GCGCTGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCAC 943 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGC 1003 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GGTGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGC 1063 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGA 1123 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 ACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAA 1183 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 AAACAGAAAAAAAAACATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGA 1243 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GGAGGCCGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCACCTTCAC 1303 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 CCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACT 1363 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 GCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAAT 1423 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 AACATATAAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCA 1483 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 CAGTGAAGAGAGGAAGCAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGC 1543 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 CAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCAC 1603 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 ------------------------------------------------------------ consensus_9358#4 ------------------------------------------------------------ consensus_9358#0 AGTCAACGCTCAAATTCACGCGCTGAGAACAAGACAGCCATATTTGTTTGTTTAACACCA 1663 consensus_9358#1 ------------------------------------------------------------ consensus_9358#2 ------------------------------------------------------------ consensus_9358#3 --------------- consensus_9358#4 --------------- consensus_9358#0 CCACATTGGTCAATG 1678 consensus_9358#1 --------------- consensus_9358#2 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||