These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9369#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1484 fasta sequence [CCGCCCACGCGTCCGCGGTTGGTTGTGTGCAACTGGTACAAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC-GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACT-GGCAAGGGAACGC-AGCAC-CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAAACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATCGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAA-A-ATTATATGTATCATGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATTATCTAAAAAAAAATTTGGAATT] [+] EMBL BM585633 [CCGCCCACGCGTCCG GGTTGGTTGTGTGCAACTGGTACAAGTTTCGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTCACTATTAACGATCCATGCTATCGCCACGCTGCTGCAGTGTTTGAACCATAGACTTACACGTAAATCTGCATTTAAAACAGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCCCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATTACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGTATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAG ] [+] EMBL BM610091 [CCGCCCACGCGTCCGCGGTTGGGTGTGTGCAACTGGTACAAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGT ] [+] EMBL AL692646 [ CCGAGGTT ATTGTGTGC ACTGGTACAAGCTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCAATCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCG ] [+] EMBL CNS08GYX [ TTGGTTGTGTGCA TGGTACTAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTTAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCATCATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTTCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACC ] [+] EMBL CNS09LOI [ TGTGCA TGGTACTAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTTAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCATCATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTTCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCAAAAAAAGAGAACGGCTA ] [+] EMBL BM602087 [ ccgGCAACTGGTACAAGTTTTGGTGATCAATTTTTCATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATTTAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGGTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGC ] [+] EMBL BX605145 [ GAGTCGCTAAAAATGATTTACTTTTAACGATCCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGCAAATCTGCATTTAAAACGGTAAGCTCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGGAGAAAACAGCACAGTCCCAAATACTGCA GCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATTACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGC ] [+] EMBL CNS09HPO [ TTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATTACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGTGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTAGCTGGTAGTGTGAACGGCTAGGACT GGCAAGGGAACGC AGCAC CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAAACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATC ] [-] EMBL CNS09HPP [ GTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCAAACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACC GGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGTGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTAGCTGGTAGTGTGAACGGCTAGGACT GGCAAGGGAACGC AGCACGCGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAAACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATCGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAACA A ATTATATGTATCATGATTGTGTACTCTACCGCCCACCTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATTATCTAAAAAAAAA ] [-] EMBL CNS09LOJ [ ATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACTCGGCAAGGGAATGC GGCGA CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAGTAACCAAAAACAACATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAG TAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCAACGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAAGAGATTATATGTATCATGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATT ] [-] EMBL CNS08GYY [ CCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGAACT GGCAAGGGAATGCGCGCGA CGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTGCGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTTCTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAGTAACCAAAAACAACATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAGCGAGCAG TAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCAACGTGGGCGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGCACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAA A ATTATATGTATCATGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATTTTGTATTATCTAGCTCTTTTTTTGGAATT] consensusID : consensus_9369#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 719 fasta sequence [CTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGAAGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGGAACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTGTGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCTTTTGCTCGACAGTGTGTAGCCTAAAAATAAATGATCACTCGTGCTT] [+] EMBL BX625148 [CTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGAAGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGGAACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTGTGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCTTTTGCTCGACAGTGTGTAGCCTAAAAATAAATGATCACTCGTGCTT] [+] EMBL BX624687 [ CCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGAAGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGGAACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTGTGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCTTTTGCTCGACAGTGTGTAGCCTAAAAATAAATGATCACTCGTGC ] consensusID : consensus_9369#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 689 fasta sequence [CCGCCCACGCGTCCGCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTGCACCCGAAACCTGTTTGCTGGTAGTGTGAACGGCTAGGACAG] [+] EMBL BM616703 [CCGCCCACGCGTCCGCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAACTAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGACACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATGCTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTGGCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAGGCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTGCACCCGAAACCTGTTTGCTGGTAGTGTGAACGGCTAGGACAG] consensusID : consensus_9369#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence [CCGGATTGATAGCAAAAAAAAAAAAAGGGCGGGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACTGGCAAGGGAATGCGGCGACGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCG] [+] EMBL BM649918 [CCGGATTGATAGCAAAAAAAAAAAAAGGGCGGGTGAAGGCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGGATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATAAACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGGACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGTATGATAGAATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACTCCGCTCCGTGATCACGGCGTTCGGCTCACGGTATTTCCCTGGTGGCGGTAGTTAAATGTGTCCGCGGTGTGTGCAATGTTCCACCCGAAACCCTGTTTGCTGGTAGTGTGAACGGCTAGGACTGGCAAGGGAATGCGGCGACGCTTCCGAAGCTAGGCAATTGTACAGCAGGCAGGCTGATTACTCCAACGTGAGCG] consensusID : consensus_9369#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 154 fasta sequence [AGCAGAATCGCCCGAGGGNTCTTGGTACAGTTTGGTGATCAATTTTTCATCATTTTCCTTTAACCGGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACT] [+] EMBL AL697264 [AGCAGAATCGCCCGAGGGNTCTTGGTACAGTTTGGTGATCAATTTTTCATCATTTTCCTTTAACCGGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGATTCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 CCGCCCACGCGTCCGCGGTTGGTTGTGTGCAACTGGTACAAGTTTTGGTGATCAATTTTT 60 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 CATCATTTTCTACCGTTTATTAAATTATTGAGTCGCTAAAAATGATTTACTTTTAACGAT 120 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 TCATCCTATCGCCACGCTGCTGCAGTGTTTGAACCGTAGACTTACACGTAAATCTGCATT 180 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 TAAAACGGTAAGCCCGAAGCAACATTACCCCTCAGTAGCTGTGCGCGCCGAATGACGTGG 240 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 -------------------------------CTTTTCCGGACGAGTACGGCAAACAAAAC 29 consensus_9369#2 CCGCCCACGCGTCCGCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAAC 60 consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 AGAAAACAGCACAGTCCCAAATACTGCAGCGCTTTTCCGGACGAGTACGGCAAACAAAAC 300 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 TAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGAC 89 consensus_9369#2 TAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGAC 120 consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 TAGATTTGGGTGTGATTCTAGCGGGCCACTGTAGCGAACAAAATGTTTGAAATAACCGAC 360 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATG 149 consensus_9369#2 ACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATG 180 consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 ACACAGAAAATCGGAGTCGGGTTGGCTGGCTTCGGGATCACGTTTCTGTTCCTGGGCATG 420 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 CTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTG 209 consensus_9369#2 CTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTG 240 consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 CTTTTACTGTTCGACAAAGGATTGCTAGCGATAGGAAATATACTGTTCGTGTGCGGTCTG 480 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 GCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAG 269 consensus_9369#2 GCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAG 300 consensus_9369#3 -----CCGGATTGATAGCAAAAAAAAA----------------AAAAGGGCGG-GTGAAG 38 consensus_9369#0 GCGTGCGTGATTGGGCTCGAGCGAACGTTTCGCTTCTTCTTCCAGAAGCACAAAGTGAAG 540 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 GCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGG 329 consensus_9369#2 GCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGG 360 consensus_9369#3 GCATCGATTTCGTTCTTCGGCGGCATTGCGATCGTACTATTCGGCTACCCGCTGATCGGG 98 consensus_9369#0 GCATCGATTTCGTTCTTCGGCGGCATCGCGATCGTACTGTTCGGCTACCCGCTGATCGGG 600 consensus_9369#4 ------AGCAGAATCGCCCGAGGGNTCTTG---GTACAGTTTGGTGATCAATTTTTCATC 51 * ** * * ** * * **** ** ** * * * ** consensus_9369#1 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 389 consensus_9369#2 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 420 consensus_9369#3 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 158 consensus_9369#0 ATGCTCATCGAGATGTACGGGTTCATACTGCTGTTCAGTGGGTTCTTCCCGGTGGCCATA 660 consensus_9369#4 ATTTTCCTTTA-----ACCGGTTTATTAAATTATTGAGTCG-------CTAAAAATGATT 99 ** ** * * ** **** ** * ** *** * * ** consensus_9369#1 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 449 consensus_9369#2 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 480 consensus_9369#3 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 218 consensus_9369#0 AACTTCCTGCGGCGGGTACCGGTGCTAGGGAACATCCTGAACATGCCCGGCATTAGCAGG 720 consensus_9369#4 TACTTTTAACGATTCATCCTATCGC-------CACGCTG--------CTGCAGTGTTTGA 144 **** ** * * ** ** *** * *** * * consensus_9369#1 ACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGGGCAATGGTTACTCCAACTGA 509 consensus_9369#2 ACTGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGG-----------TATGATAGA 529 consensus_9369#3 ACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGG-----------TATGATAGA 267 consensus_9369#0 ACCGTCGACTGGTTGGCGGGCGAATCGGACCGAACGACGG-----------TATGATAGA 769 consensus_9369#4 ACCGTAGACT-------------------------------------------------- 154 ** ** **** consensus_9369#1 AGTAGAAAAGGCACACAATCCCTACTACTGGCCTACTTGACCAGCAATCGAACAAGGTGG 569 consensus_9369#2 ATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACT---CCGCTCCGTGATCACGGCGT 586 consensus_9369#3 ATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACT---CCGCTCCGTGATCACGGCGT 324 consensus_9369#0 ATTAAGTACCATTTGTTTTTGTTCTTTCTCTCCAACT---CCGCTCCGTGATCACGGCGT 826 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 AACACGCACTCGAAAGGGATCTACCGGCAGTGACAGTGTGTAAGAGCGAGAGAGAGAGTG 629 consensus_9369#2 TCGGCTCAC------GGTATTTCCCTG--GTGGCGGTAGTTAAA--------------TG 624 consensus_9369#3 TCGGCTCAC------GGTATTTCCCTG--GTGGCGGTAGTTAAA--------------TG 362 consensus_9369#0 TCGGCTCAC------GGTATTTCCCTG--GTGGCGGTAGTTAAA--------------TG 864 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 TGTGTGTGTGTTTGTGCGTATGCGTGTCTCTGTCTCGTCGTCCT-TTTGCTCGACAGTGT 688 consensus_9369#2 TGTCCGCG-GTGTGTGCA-----ATGTTGCA--CCCGAAACCTG-TTTGCT-GGTAGTGT 674 consensus_9369#3 TGTCCGCG-GTGTGTGCA-----ATGTTCCA--CCCGAAACCCTGTTTGCT-GGTAGTGT 413 consensus_9369#0 TGTCCGCG-GTGTGTGCA-----ATGTTCCA--CCCGAAACCCTGTTTGCT-GGTAGTGT 915 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 GTAGCCTAAAAATAAATGATCACTCGTGCTT----------------------------- 719 consensus_9369#2 GAACGGCTAGGACAG--------------------------------------------- 689 consensus_9369#3 GAACGGCTAGGACTGGCAAGGGAATGCGGCGACGCTTCCGAAGCTAGGCAATTGTACAGC 473 consensus_9369#0 GAACGGCTAGGACTGGCAAGGGAACGCAGCACCGCTTCCGAAGCTAGGCAATTGTACAGC 975 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 AGGCAGGCTGATTACTCCAACGTGAGCG-------------------------------- 501 consensus_9369#0 AGGCAGGCTGATTACTCGAACGTGAGCGTGCTGCCGTTGATGGAAGTATTTTTGCGTTTG 1035 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 CGTTTAGTTAGGTTTACAGGTACCGAACGTACTAGGGGAAGGAGAATACCTTTCCGCTTT 1095 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 CTCGTCTAGTTAAAATCCGTTTTTAGTTTAACAACAACCAGAAAAGTGTAATAACCAAAA 1155 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 ACAAAATCCAAAACAAGCTGTATGTATGCACAGAAGCAGAGAAAGTGTGAGAGGAAAAAG 1215 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 CGAGCAGAAAAAAGACAAAGATTTATCAAATCAACTGCTAAGTTAATGTCGCATCGTGGG 1275 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 CGTTGTTTAAATGTTTGTGTTCCTTGTCCGTTGGATCTGTAGGGTGAGGTGTACAAGTGC 1335 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 ACGATAGGGTAGCAACAAACAGGGAAGAAAATGCCATTGTTCAAAAAATTATATGTATCA 1395 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ------------------------------------------------------------ consensus_9369#2 ------------------------------------------------------------ consensus_9369#3 ------------------------------------------------------------ consensus_9369#0 TGATTGTGTACTCTACCGCCCACTTCCCTCTCAGCAATATGTACATAAAGCGAATAAATT 1455 consensus_9369#4 ------------------------------------------------------------ consensus_9369#1 ----------------------------- consensus_9369#2 ----------------------------- consensus_9369#3 ----------------------------- consensus_9369#0 TTGTATTATCTAAAAAAAAATTTGGAATT 1484 consensus_9369#4 ----------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||