These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9375#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1599 fasta sequence [GCGTAGTGCCGATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAA-AATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCA-GATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGTGGGTATGACCGTAAAATCCGCATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGACCACGGGCAGCCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGT-ACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA-GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGG-CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTTGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGACAAAATAGAAACTATCAACCCATACA] [+] EMBL CNS0900E [GCGTAGTGCCGATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAA AATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCA GATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGTGGGTATGACCGTAAAATCCGCATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGACCACGGGCAGCCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGT ACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCCACCACCAGCACATCTTCGAG ] [+] EMBL CNS09HBZ [ AAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAACAACCATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCACGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGA ] [-] EMBL CNS08MEJ [ GGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTAACGAT TCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAACAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTTGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTGTTTGCACGGGTAGGTATA ] [-] EMBL CNS0900F [ GGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA GAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGGCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACTGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGACAAAATAGAAACTATCAACCCATACA] [+] EMBL BX628765 [ gaccgtaaaATC CGAATGTACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCTGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGC ] [-] EMBL CNS09BFM [ CGACGAAACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAACAGCCGACCCAGCGGGTGCGCAAGGG CCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTTGAGGAGTTCAAGTTCGTGCGATACGAGGGGCACGATCGGGCA TGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTG TTGCACGGGTA ] [-] EMBL CNS09EAG [ CGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCCCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTCGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGACCGGAGCGTGTTTGCACGGGTAGGGATAAACAA ] [-] EMBL CNS08PND [ TAATCCGGCGGAAGGGTCTGCACCGGGCGCTGAACGATCGTTCGCCCGAGTCGTTGGTGAACTTCATCAACTTTTTAACGCGCCACATCGGCGACTATCGGTTAACGCCCGTGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAAATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTAACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGAAGGGTATGCTGAACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTAACTGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGA ] [-] EMBL CNS09HC0 [ TGCTGATCGACGCGGGCAACATTCTGCTGGACGTGTACGAAGATTCGCTCGAAAAGTTTGCCGGCACGATCGTGGGCAAAGCGTTCGTGACGCTCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTATGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGATCGCACCGTACGACGCCT ] consensusID : consensus_9375#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 965 fasta sequence [CCGAAACGAACGCACGTGCTGGCGTAGGTGCCGATACAGTGAAA-AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG-GTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGT-GGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA] [+] EMBL BM640296 [CCGAAACGAACGCACGTGCTGGCGTAGGTGCCGATACAGTGAAACAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTGGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG GTGACTGCCTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGGACCACGGGCAGCCGGTAAAATCGTTGGTGTTT ] [+] EMBL CNS09EAF [ CACGTGCTGGCGTAGGTGCCGATACAGTGAAA AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG GTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTTTCCGGCGGGTTTGA ] [+] EMBL CNS09BFL [ CTGTCGCCGGACACAATCTATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCGCGTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGT GGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATC ] [+] EMBL CNS08MEI [ tCTATTAAAATATTTCGGTGCCATCGATTACATCGACTTCTGTCCGGTAGAACCGTACCTGTTCGCG GTGACTGCTTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACGGCGGAACGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTAAAAGAGTGCGTAATGACCGT GGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAA] consensusID : consensus_9375#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 793 fasta sequence [AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTTGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTACTGATCGACGCGGGCAA] [+] EMBL CNS08PNC [AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCGACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCTACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCGAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGCACTGCGTAAGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAATGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGCGCTGGACGATCGTTCGCCCGAGTTGTTGGTGCACTTCATCAACTTTCTCACGCGCCACATCGGCGACTATCGGTTCACGCCCGTACTGATCGACGCGGGCAA] consensusID : consensus_9375#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 705 fasta sequence [ATCGCCGAGTTACATGTAGCTGGCCCAGCTCTCCCAGCACACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACACCAGCACATCTTCGCAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAATGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAACTGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGACGCTGGACGATCGTACGCCCGAGTCGATGGTAGCACTTCATCAACTTTCTCACAGCGCACATCGGGCGACTATCGGTTACACGCCCGTGCTGATCGACGCGGGCAACAATNCCTGCTGGACGTGTACGAAAGATTCGCTCCGANAAAGTTNGCGGGCCNCNANCGTGGGCAAAGCGTACGNGACNCCTCGCAGAANA] [+] EMBL AL934698 [ATCGCCGAGTTACATGTAGCTGGCCCAGCTCTCCCAGCACACAAAACGGTCACCTGCCTGCAGCTGGCCAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGGCATGGTGGACGGTTTGATCGCCATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGCCGACCCAGCGGGTGCGCAAGGGCCACACCAGCACATCTTCGCAGCCGGCCGACCAGCAGGTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGCACTGCGTAATGTACGAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAACTGTGGCCGGAGAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGACGCTGGACGATCGTACGCCCGAGTCGATGGTAGCACTTCATCAACTTTCTCACAGCGCACATCGGGCGACTATCGGTTACACGCCCGTGCTGATCGACGCGGGCAACAATNCCTGCTGGACGTGTACGAAAGATTCGCTCCGANAAAGTTNGCGGGCCNCNANCGTGGGCAAAGCGTACGNGACNCCTCGCAGAANA] consensusID : consensus_9375#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 294 fasta sequence [CCAGGTTAAGCCACGGCGGATCGTTCGCAAGATGGCATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGGACACGTTCACCGGCACGAGGACTACATTCGGGCCGGTTGGACCAGCCGGGTCAGCCGAACATA] [+] EMBL AL693189 [CCAGGTTAAGCCACGGCGGATCGTTCGCAAGATGGCATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTTCGAGGGTCACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTTCTCGGACGATCGTACCGTCGGGTACTGGGATATTGCGACGGAAAACCATCTGGACACGTTCACCGGCACGAGGACTACATTCGGGCCGGTTGGACCAGCCGGGTCAGCCGAACATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 GCGTAGTGCCGATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCA 60 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 AGAAAACCGATAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATAT 120 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 ATTGGAAAAAGCTAGGGGTGCCCACGCTAGTAAAAGAGTTCGGTGCCATCGACTACATCG 180 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 ACTTTTGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCT 240 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 ACAACCCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGGCAGCCCACG 300 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 GCGGATCGTTTCGCAAGGATGGCAATCTGCTGGTGGCGGGCGACGAACTCGGCAAAGTGC 360 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 GCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTTCGAGGGTCGGGTACTGGGAT 420 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 ATTGCGACGGAAAACCATCTGCACACGTTCACCGGCCACGAGGACTACATTCGGGCCGGT 480 consensus_9375#1 ----------------------------CCGAAACGAACGCACGTGCTGGCGTAGGTGCC 32 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------AAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGA 48 consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 TGCACCAGCCCGGTCAGCCCGAACATAATCCTGTCCGGTGGGTATGACCGTAAAATCCGC 540 consensus_9375#1 GATACAGTGAAAAAAGTTTATTTCATGTGCAGTTAAAATGTCTCAATTCAAGAAAACCGA 92 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 TAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATATATTGGAAAAA 108 consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 ATGTACGATACGCGTGTGAAAGAGTGCGTCATGACCGTGGACCACGGGCAGCCGGTAGAA 600 consensus_9375#1 TAGTAAAATCTACGCAAAAACCGCGACGGTACTGTCGCCGGACACAATCTATTGGAAAAA 152 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 GCTAGGGGTGCCCACGCTAGTAAAAGAGT-----TCGGTGCCATCGACTACATCGACTTT 163 consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 TCGTTGGTGTTTCTGCCGAGCGGTGGCATCTTCATCAGTGCCGGCGG-TACCTCGGTGAA 659 consensus_9375#1 GCTAGGGGTGCCCACGCTAGTAAAAGAGT-----TCGGTGCCATCGATTACATCGACTTC 207 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 TGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCCTCGGTCCGCGTGCAGATCTACAAC 223 consensus_9375#3 -----------ATCGC-CGAGTTACATGTAGCTGGCCCAGCTCTC---CCAGCACACAAA 45 consensus_9375#0 CGTGTACGATGCCCTGTCGGGCGGCCGGCAGCTGGCCCAGCTCTCC--CAGCACCACAAA 717 consensus_9375#1 TGTCCGGTAGAACCGTACCTGTTCGCGGTGACTGCTTCGGTCCGCGTGCAGATCTACAAC 267 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 CCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGCGTCTGTTTTCCGGCAG 283 consensus_9375#3 ACGGTCACCTGCCTGCAGCTGGCCAGCG-------ATGGCAAGCGTCTGTTTTCCGGCAG 98 consensus_9375#0 ACGGTCACCTGCCTGCAGCTGGCCAGCG-------ATGGCAAGCGTCTGTTTTCCGGCAG 770 consensus_9375#1 CCCATTACAAAGCTCGTGGTGAAAAACATAACAAAGTTCCAAGAGG-CAGCCCACGGC-- 324 consensus_9375#4 --------------------------------------CCAGG--T-TAAGCCACGGC-- 17 ** * **** consensus_9375#2 CTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGA 343 consensus_9375#3 CTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGA 158 consensus_9375#0 CTTGGACCGGCACGTGAAGGTGTACGACATAGCCACCTACCAGGTGGTGCACACGATCGA 830 consensus_9375#1 ---GGAACGTTTCGCAAGGATG------GCAATCTGCTGGTGGCGGGCG-ACGAACTCGG 374 consensus_9375#4 ---GGATCGTT-CGCAAG-ATG------GCA-TCTGCTGGTGGCGGGCG-ACGAACTCGG 64 *** ** ** * ** * * ** * ** * ** *** consensus_9375#2 CAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGG 403 consensus_9375#3 CAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGG 218 consensus_9375#0 CAGCTCGAACGCGATTCTGAGCCTCGGCATCTCGAAGAACGACGACACGCTCGTGACGGG 890 consensus_9375#1 CAA----AGTGCGCCTGTTCGATGTGACCACGCGCACGATCCTACGATACTT-CGAGGGT 429 consensus_9375#4 CAA----AGTGCGCCTGTTCGATGTGACCACTCGCACGATCCTACGATACTT-CGAGGGT 119 ** * *** * * * * * * ** * * * ** ** ** consensus_9375#2 CATGGTGGACGGTTTGATCGC-CATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGC 462 consensus_9375#3 CATGGTGGACGGTTTGATCGC-CATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGC 277 consensus_9375#0 CATGGTGGACGGTTTGATCGC-CATCTATCGGCGCGAGGGCGATCCGCGGGACGAGCAGC 949 consensus_9375#1 CACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGACACCATGTAGCGAGCTT- 488 consensus_9375#4 CACAAGGCTCCGGTGCATCGCACGTTCTTTACCGCGGACGGGCACCATGTAGCGAGCTT- 178 ** * * * * ***** * * * **** * ** * ***** consensus_9375#2 CGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCG-AGCCGGCCGACCAGCAG 521 consensus_9375#3 CGACCCAGCGGGTGCGCAAGGGCCAC-ACCAGCACATCTTCGCAGCCGGCCGACCAGCAG 336 consensus_9375#0 CGACCCAGCGGGTGCGCAAGGGCCACCACCAGCACATCTTCG-AGCCGGCCGACCAGCAG 1008 consensus_9375#1 ---CTCGGACGAT-CGTACCGTCGGGTACTGGGATATTGCGA----CGGAAAACCATCTG 540 consensus_9375#4 ---CTCGGACGAT-CGTACCGTCGGGTACTGGGATATTGCGA----CGGAAAACCATCTG 230 * * * * * ** * * * ** * * ** *** **** * * consensus_9375#2 GTGGAGGAGTTCAAGTTCGTGCGCTACGAAGGGCACGATCGGGC--ACTGCGTAA-GTAC 578 consensus_9375#3 GTGGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGC--ACTGCGTAATGTAC 394 consensus_9375#0 GTTGAGGAGTTCAAGTTCGTGCGCTACGAGGGGCACGATCGGGC--ACTGCGTAA-GTAC 1065 consensus_9375#1 CACACGTTCACCGGCCACGAGGACTACATACGGGCCGGTTGCACCAGCCCGGTCA-GCCC 599 consensus_9375#4 GACACGTTCACCGGC-ACGAGGACTACATTCGGGCCGGTTGGACCAGCCGGGTCA-GCC- 287 * * ** * **** ** ** * * * * ** * * consensus_9375#2 GAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAA-TGTGGCCGGA 637 consensus_9375#3 GAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCCAAGGTAAGGGGAACTGTGGCCGGA 454 consensus_9375#0 GAGTACAAGAAGGCACTGGATGCGGTCATGGCGGCAAAGGTAAGGGGAA-TGTGGCCGGA 1124 consensus_9375#1 GAACATAATCCTGTCCGGCGGGTATGACCGTAAAATCCGAATGTACGATACGCGTGTGAA 659 consensus_9375#4 GAACATA----------------------------------------------------- 294 ** * * consensus_9375#2 GAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGG-CGCTGG 696 consensus_9375#3 GAAAACCGTGGCCCTCATCAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGGACGCTGG 514 consensus_9375#0 GAAAACCGTGGCCCTCATTAAGGAGCTAATCCGGCGGAAGGGTCTGCACCGGG-CGCTGG 1183 consensus_9375#1 AGAGTGCGTCATGACCGTGGACCACGGGCAACCGGTAGAATCGTTGGTGTTTCTGCCGAG 719 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ACGATCGTTCGCCCGAGTTGTTGGT-GCACTTCATCAACTTTCTCACGCGCCACATCGG- 754 consensus_9375#3 ACGATCGTACGCCCGAGTCGATGGTAGCACTTCATCAACTTTCTCACAGCGCACATCGGG 574 consensus_9375#0 ACGATCGTTCGCCCGAGTCGTTGGT-GCACTTCATCAACTTTCTCACGCGCCACATCGG- 1241 consensus_9375#1 CGGTGGCATCTTCATCAGTGCCGGCGGTACCTCGGTGAACGTGTACGATGCCCTGTCGGG 779 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 CGACTATCGGTT-CACGCCCGTACTGATCGACGCGGGCAA-------------------- 793 consensus_9375#3 CGACTATCGGTTACACGCCCGTGCTGATCGACGCGGGCAACAATNCCTGCTGGACGTGTA 634 consensus_9375#0 CGACTATCGGTT-CACGCCCGTGCTGATCGACGCGGGCAACA--TTCTGCTGGACGTGTA 1298 consensus_9375#1 CGGCCGGCAGCTGGCCCAGCTCTCCCAGCACCACAAAACGGTCACCTGCCTGCAGCTGGC 839 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 CGAAAGATTCGCTCCGANAAAGTTNGCGGGCCNCNANCGTGGGCAAAGCGTACGNGACNC 694 consensus_9375#0 CGAA-GATTCGCTC--GAAAAGTTTGCCGGC-ACGATCGTGGGCAAAGCGTTCGTGACGC 1354 consensus_9375#1 CAGCGATGGCAAGCGTCTGTTTTCCGGCAGCTTGGACCGGCACGTGAAGGTGTACGACAT 899 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 CTCGCAGAANA------------------------------------------------- 705 consensus_9375#0 TCGCGAACAAGCTGCAGACGGAGGAGCAGCTGGTGCAGGAGTTCCTGAACCTGCAGGGTA 1414 consensus_9375#1 AGCCACCTACCAGGTGGTGCACACGATCGACAGCTCGAACGCGATTCTGAGCCTCGGCAT 959 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 TGCTGGACATGATTTCGGTGGCGGCGGATACGGCGGAACCGGACACCGTGGACGATGCGA 1474 consensus_9375#1 CTCGAA------------------------------------------------------ 965 consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 TCGCACCGTACGACGCCTCGAACAAGGCGAAGAATCAAACGGTCATATCGGTCGACTGAC 1534 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ------------------------------------------------------------ consensus_9375#3 ------------------------------------------------------------ consensus_9375#0 CGGAGCGTGTTTGCACGGGTAGGGATAAACAACGCAAGACAAAATAGAAACTATCAACCC 1594 consensus_9375#1 ------------------------------------------------------------ consensus_9375#4 ------------------------------------------------------------ consensus_9375#2 ----- consensus_9375#3 ----- consensus_9375#0 ATACA 1599 consensus_9375#1 ----- consensus_9375#4 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||