These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9380#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1772 fasta sequence [CCTACTGGAAATACTGGTTTGAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG-AAAAAAAAAACTCCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACTTTCACAGAATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG-AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATAAAAAAAAAAAGAACTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTACTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCAATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCCCTTGAAATGTTGGTCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACGCCAGCCCTCATAACAAATCCCTGCCATTGACGACTTGACAGTAGGCATCGGTGAATGACATTTGAGCGCACAGCGCCATCTGCACGTCAAAAATACAACCATCAGTCGATTTGAATGATTGTAATTTAAATTAGCCGTTTTCAATCCATGGGGCAAACAAACGGGAAAATTACTAGAGTACATTTCATTTTGTAAAATCAAAAAAAA] [+] EMBL CNS0920Y [CCTACTGGAAAAAGCAGTTTGAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG AAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATAGTCCAATTACTTTCACAGCATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACTCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGA ] [+] EMBL CNS08L8J [ TACTGGTTTGAAATTAACACGGTTTGCGGCA GATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAAACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAAAAGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTAATGACGGATGCGC ] [+] EMBL CNS09DRA [ TACTGG AAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG AAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATAGTCCAATTACTTTCACAGCATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTC ] [+] EMBL CNS09AY9 [ TGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAG AAAAAAAAAACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTAATGACGGATGCGCTAAACTACACG AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACATGCACATGCAG ] [+] EMBL BX605370 [ CAGCAGCAGCAAAG AAAAAAAAAACTCCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCCAACATCGTCCGATTACTTTCACAGAATGTCTCGGAAAACGTACTCCTCGGTAGAATGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATTATCAACGAGAAAGTTTACGCAAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCATCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACACCGGAATACGTGAACCCATACCGAGAGGGAGCACAAC ] [-] EMBL CNS09AYA [ ACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAAATCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCCACTGGCGCACCCTAATGACGGATGCGCTAAACTACACG AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTTACTGTCACCCGCCAAGACAGAACTGTAAAAGTACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTA ] [+] EMBL BX623132 [ AATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCCAACATCGTCCGATTACTTTCACAGAATGTCTCGGAAAACGTACTCCTCGGTAGAATGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATTATCAACGAGAAAGTTTACGCAAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCATCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACACCGGAATACGTGAACCCATACCGAGAGGGAGCACAACAGACGGAATCTACCAAGC ] [-] EMBL CNS08Y6A [ AAGTACCGGAGCTCGATCTGGTTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAAT CTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCAACTGGCGCACCCTAATGACGGATGCGCTAAACTACACG AAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGAACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCT ] [-] EMBL CNS0920Z [ AATCAACGAGAAAGTTTACTCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGAGCACAACAGACGGAATCTACCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCCCTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATAAAAAAAAAAA ] [-] EMBL CNS09DRB [ GCATACTTAAGGGCGTTTCCTACTGGCGCACCCTCATGACGGATGCGCTGAACTACACG AAAACGTTCGTGAAAATATTGGACGAGAAATCCGTCGAACTGCTTGGGCTGTTTAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTTCCGAGAGGGAGCACTACAGACGGATTTTACCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTCCCTGTCACCCGCCAAGACAGAACTGTAAAAGAAAACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATA ] [-] EMBL CNS08L8K [ aataAAGGGCGTTTCCAACTGGCGCACCCTAATGACGGATGCGCTAAACTACACGCAAAACGTTCGTGAAAATTTTAGACGAGAAATCCGTCGGACTGCTTGGGCTGCTAAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTACCGAGAGGGGGCACCACAGACGGATTCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACCGAAAAAAGGACCCTAACTGTCACCCGCCAAGACAGGACTGTAAAAGGAAACACACAACATGCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATAAAAAAAAAAAGAA ] [-] EMBL BX621628 [ AATGATTTCGTTTACTTAAATATACGCTTATGAGGAATTTACAATATAACCTTATCGCCCTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTACTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCAATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCCCTTGAAATGTTGGTCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACGCCAGCCCT ] [-] EMBL AGA280311 [ TCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACGCCAGCTATCATAACAAATCCCTGCCATTGACGACTTGACAGTAGGCATCGGTGAATGACATTTGAGCGCACAGCGCCATCTGCACGTCAAAAATACAACCATCAGTCGATTTGAATGATTGTAATTTAAATTAGCCGTTTTCAATCCATGGGGCAAACAAACGGGAAAATTACTAGAGTACATTTCATTTTGTAAAATCAAAAAAAA] consensusID : consensus_9380#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 730 fasta sequence [CCGCCCACGCGTCCGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTTCCACAACCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTG-GCGCACCCTCATGACGGATGCGCTGAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAAAGTTTTAATTAG] [+] EMBL BM593641 [CCGCCCACGCGTCCGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGTCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACACTTTTCCACAACCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTG GCGCACCCTCATGACGGATGCGCTGAACTA ] [+] EMBL CNS08Y69 [ cacaCGGTTTGCGGCACGATCATAAACAGTGCAGCAGCAGCAAAGAAAAAAAAAACTCCTAAATTATCGTAACACCATCATCGTTAGGGTTTAAAAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGGCTCGGAAAACGTACTCCTCGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGTTTTCCGGGCTGGAGAAAAACAATTTCCCACAACCTGTGCATGCGAAAGACGTTGAGAAAGTACCGGAGCTCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGGAGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTACAAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAAACTGAGGGGCAACCAAATTACGGCCGAATCGGAATTTCCCAAACTTCAGGAACTGATCAATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGTGAGATGGTATTACACTTCCCGGACATGTCCTATCGCATACTGAAGGGCGTTTCCGACTGCGCGCACCCTAATGACGGATGCGCTAAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCTTGGGCTGCTCAATCAAGAAATTAAAGTTTTAATTAG] consensusID : consensus_9380#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence [GGGGGGGTGGGCGGTTGTAGAAAATGATTNTNGGTNTTNAGTNTANATATACGCTTATGAGGAATTGGACGATATNACCTTATCGCCCTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTAGCTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCNATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCACCTTGAAATGTTGGTCCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACNAACCTCGGGGGAT] [-] EMBL AL694902 [GGGGGGGTGGGCGGTTGTAGAAAATGATTNTNGGTNTTNAGTNTANATATACGCTTATGAGGAATTGGACGATATNACCTTATCGCCCTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGCTCTAGCTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCNATCGACGCGCACGATTCGATCGTCCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCCTTGAATTTGTCCAGCCCCATAATGATGCGCCGCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGCACCTTGAAATGTTGGTCCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACNAACCTCGGGGGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9380#0 CCTACTGGAAATACTGGTTTGAAAGCAACACGGTTTGCGGCACGATCATAAACAGTGCAG 60 consensus_9380#1 ----------------CCGCCCACGCGTC-CGGTTTGCGGCACGATCATAAACAGTGCAG 43 consensus_9380#2 ------------------GGGGGGGTGGGCGGTTGTAGAAAATGATTNTNGGTNTTNAGT 42 * * * * * *** * * consensus_9380#0 CAGCAGCAAAGAAAAAAAAAACTCCTAAATTATCGTATCACCACCATCGTTAGGGTTTAA 120 consensus_9380#1 CAGCAGCAAAGAAAAAAAAAACTTCTAAATTATCGTATCACCACCATCGTTAGGGTTTAA 103 consensus_9380#2 NTANATATACGCTTATGAGGAATTGGACGATATNACCTTATCGCCCTAGCTCCGGCT-GT 101 * * * * * * * * *** * * * ** * * * ** * consensus_9380#0 AAAGTGAAGCCAAACATCGTCCAATTACTTTCACAGAATGTCTCGGAAAAC-GTACTCCT 179 consensus_9380#1 AAAGTGAAGCCAAACATCGTCCAATTACATTCACAGAATGTCTCGGAAAAC-GTACTCCT 162 consensus_9380#2 ACCGTGG-GCCGATTGACACGTGCTCTAGCTCGCGCATGGACGGTGCACCCAGCTGTCCC 160 * *** *** * * * ** * * * * * * * * *** consensus_9380#0 CGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGT---TTTCCGGGC 236 consensus_9380#1 CGGTGGATTGTTTATTCATACTCTTCCTAACCTCAACCTTTGCCGAGT---TTTCCGGGC 219 consensus_9380#2 ATCTGGACCATCTTGCCGTAACCGCCCCGGCCCAGATCATGATCCTGCCGGTACTCGTCG 220 **** * * * ** * ** ** * * * * * * ** consensus_9380#0 TGGAGAAAAACACTTTCCCACATCCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGC 296 consensus_9380#1 TGGAGAAAAACACTTTTCCACAACCTGTGCACGCGAAAGACGTTGAGAAAGTACCGGAGC 279 consensus_9380#2 CGCACCTGGCCACCCGTCT-TGCCCCGTCCGTACTGTCGGCCCTCGATGAAACCGGCGTC 279 * * *** * ** ** * * * * * * * * * consensus_9380#0 TCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGG 356 consensus_9380#1 TCGATCTGGGTAAAATAATCAACGAGAAAGTTTACGCGAACATATTCGTACGGAAGCGGG 339 consensus_9380#2 CCNATCGACGCGCACGATTCGATCGTCCAACC-GCGT-ACCGTTGATGTATCGCATCGCA 337 * *** * * * ** * * ** * * * *** * * ** consensus_9380#0 AGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTAC- 415 consensus_9380#1 AGGAACATAAGCTACTGGTGAACCATCTACAATCGATCGAAGATTACAGCAAACGGTAC- 398 consensus_9380#2 CTTTCCGCGT-CTAACCGTGAATAATACTCGACGAAGCAGAAGCCGCACGGTGTCTTCCT 396 * *** ***** ** * * * * * ** * * consensus_9380#0 -AAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAA 474 consensus_9380#1 -AAACTCATGAAGCTAGGAATCGATGAAATCCTACGGATAATCCGCGAGGAAGGAGGCAA 457 consensus_9380#2 TGAATTTGTCCAGCCCCA---TAATGATGCGCCGCACATCA-CCGC-AGCGCGAAAACAG 451 ** * * *** **** * * ** * **** ** * * ** consensus_9380#0 ACTGAGGGGCAACCAAATTACGGCC--GAATCGGAATTTCCCAAACTTCAGGAACTGATC 532 consensus_9380#1 ACTGAGGGGCAACCAAATTACGGCC--GAATCGGAATTTCCCAAACTTCAGGAACTGATC 515 consensus_9380#2 CTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAAGATTGCCCACGTACAGGGTGGAGGA 511 * ** * * ** **** * ** ** * * **** consensus_9380#0 AATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTC 592 consensus_9380#1 AATGCGCTGGCACAGTTTCTCGAAAACACCTGCCTGTTCGGCGAGATGGTATTACACTTC 575 consensus_9380#2 AACGCGCAGGAGCT-TTTCCTGTTCATGCCGGGA-GCACCTTGAAATGTTGGTCCCCTGT 569 ** **** ** * **** * * ** * * * ** *** * * * ** consensus_9380#0 CCGGACATGTCCTATCGCATACTGAA-GGGCGTTTCCGACTGGCGCACCCTCATGACGGA 651 consensus_9380#1 CCGGACATGTCCTATCGCATACTGAA-GGGCGTTTCCGACTGGCGCACCCTCATGACGGA 634 consensus_9380#2 ATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAATTTGAGAAGACATTTTCCGGG 629 ** * * ** ** * * ** * * * * * * * * *** consensus_9380#0 TGCGCTGAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCT 711 consensus_9380#1 TGCGCTGAACTACACGAAAACGTTCGTGAAAATATTAGACGAGAAATCCGTCGAACTGCT 694 consensus_9380#2 CCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATGCCGCAAAATGTACNAACCTCG 689 * * * * **** ** ** * * * *** * *** * consensus_9380#0 TGGGCTGCTCAATCAAGAAATTAACGAGGACCAGCGAACGCCAGAGTACGTGAACCCGTA 771 consensus_9380#1 TGGGCTGCTCAATCAAGAAATTAA--AGTTTTAATTAG---------------------- 730 consensus_9380#2 GGGGAT------------------------------------------------------ 695 *** * consensus_9380#0 CCGAGAGGGAGCACAACAGACGGAATCTGCCAAGCCGAAGAAAAAAAGCAAATCGAAACC 831 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 GAAAAAAGGACCCTCACTGTCACCCGCCAAGACAGAACTGTAAAAGCACACACACAACAT 891 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 GCACATGCAGCTCCGGTTGTAGAAAATGATTTCGTTTACTTAAATATACGCTTATGAGGA 951 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 ATTTACAATAAAAAAAAAAAGAACTAGCTCCGGCTGTACCGTGGGCCGATTGACACGTGC 1011 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 TCTACTCGCGCATGGACGGTGCACCCAGCTGTCCCATCTGGACCATCTTGCCGTAACCGC 1071 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 CCCGGCCCAGATCATGATCCTGCCGGTACTCGTCGCGCACCTGGCCACCCGTCTTGCCCC 1131 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 GTCCGTACTGTCGGCCCTCGATGAAACCGGCGTCCCAATCGACGCGCACGATTCGATCGT 1191 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 CCAACCGCGTACCGTTGATGTATCGCATCGCACTTTCCGCGTCTAACCGTGAATAATACT 1251 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 CGACGAAGCAGAAGCCGCACGGTGTCTTCTTGAATTTGTCCAGCCCCATAATGATGCGCC 1311 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 GCACATCACCGCAGCGCGAAAACAGCTCGTGGATCTGCTCCTCGGTGGTGTAGAATGAAA 1371 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 GATTGCCCACGTACAGGGTGGAGGAAACGCGCAGGAGCTTTTCCTGTTCATGCCGGGAGC 1431 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 CCTTGAAATGTTGGTCCCTGTATTTACTCAGCGATACCGATGGTGTATGAACGGATTGAA 1491 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 TTTGAGAAGACATTTTCCGGGCCTTTTAATTTTAGCAAAAATTGCCGCAAACCAACGATG 1551 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 CCGCAAAATGTACGCCAGCCCTCATAACAAATCCCTGCCATTGACGACTTGACAGTAGGC 1611 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 ATCGGTGAATGACATTTGAGCGCACAGCGCCATCTGCACGTCAAAAATACAACCATCAGT 1671 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 CGATTTGAATGATTGTAATTTAAATTAGCCGTTTTCAATCCATGGGGCAAACAAACGGGA 1731 consensus_9380#1 ------------------------------------------------------------ consensus_9380#2 ------------------------------------------------------------ consensus_9380#0 AAATTACTAGAGTACATTTCATTTTGTAAAATCAAAAAAAA 1772 consensus_9380#1 ----------------------------------------- consensus_9380#2 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||