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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9385#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1417 fasta sequence
[CCGCGGACGCGTGGGCGCGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAAACGCGAAAAGAAAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCAGAATGACCCAATTGAAGCAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTGCGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAG-AGAGTATACACACACAAAAAGGGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACTACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTA---TG---GA-GAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCA-AAC-AACTAATCACCAATCACAGCAACA-TAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAAC----AAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTAGGTTAA-CAAAAACCAAAAAAANTNNCAACAAAAANGCAGCATGTG]
[+] EMBL BM613579 [CCGCGGACGCGTGGGCGCGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAAACGCGAAAAGAAAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCAGAATGACCCAATTGAAGCAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTGCGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAG AGAGTATACACACACAAAAAGGGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACTACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTA TG GA GAGGAAGAACCTGGAACCGGCCGGAT ]
[+] EMBL BX616369 [ GTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAGTATA CACACACACACCAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCA AAC AACTAATCACCAATCACAGCAACA TAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAA ]
[+] EMBL BM594719 [ ccgGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCA AAC AACTAATCACCAATCACAGCAACA TAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAAC AAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTA ]
[-] EMBL BX466728 [ CCAGCTCGTCGTGGTAGGATGATTGATTGATAATCCNAAGC AGAGAGAGAGAGCANAACGAACTAATCACCAATCACAGCAACAGTAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAAAGAGAGGACCT TTCTCTTCTATCGCCGCACCAGTTAGTGCCGCTT CAGACTGTTCCGACAAGACCGAGCTGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAGTCCCGTATGTACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAACAACAAAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTAGGTTAACCAAAAACCAAAAAAANTNNCAACAAAAANGCAGCATGTG]
[+] EMBL BM647859 [ ccgTAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCGAGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCAGCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAAC AAAAAAAAAAACACTGCAAGAGATTTAATAATATATTTTAGGTTAA CAAAAACAAAAAcctcg ]
consensusID : consensus_9385#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1337 fasta sequence
[CTGGGGGTGAAGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGGAGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCAGCCG-CCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG---CA--AAAAAAAAA-CA-GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAG-TATA-CACACACACACAAAAAGGGAATGTAATTGAATGC-AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA-TTTCGTCCAAACGCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGTTTTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGC--AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCG-TTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAGTTAGTGCCGCTTCAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACATGAAAC]
[+] EMBL CNS095VE [CTGGGGGTGAAGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGGAGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCAGCCG CCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGTGCAGAAGCGTTGACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG C AAAAAAAA CA GGGTAAATTGT ]
[+] EMBL CNS097XU [ acGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGGAGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCAGCCG CCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG CA AAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAG TATA CACACACACACAAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACAGTGAGTTAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTTTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTT ]
[-] EMBL CNS097XV [ TGCAATATAAAATAATACGGCAGCCGCCCCCCCCCCCGGCGCGTCCTTCCCACGGGAAATCGTGTGCGTAGTGAAAGAAATCATAAAGCAAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGAACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAAAACATAAAAACAAAAACCAACTTGCTCTAAAAAACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGGAGAAGCG TAACACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG CA AAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAG TATA AAAAAACACACAAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACAGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTTTTCCTTTCGACAGTTGAGAGTTTTCGTTTGCTTTTCTTTGTTTTATTTCTTACCTAAATATCAAATAAAAGC ]
[+] EMBL BM610022 [ ccgGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACG TTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACA AAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAGAGAGAGTATACACACACAAAAAGGGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGG C GAGTGAGAAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCTTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGT ]
[-] EMBL CNS095VF [ GCAATATTTTTGAAGGTAGAACCCGGGGGCAGAAGCGTTGAAACGTTTCTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAG C AAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTCGCGGTTAAAGATAACTAGCAACAAAAAAGGGAAGAGAGAG TATA CACACACACACAAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTTTTCCTTTCGACAGTTGAGAGTTTTCGTTTGCTTTTCTTTGTTTTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAA ]
[+] EMBL BX627495 [ GCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACG TTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACA AAAAAAAAACCAGGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTGCGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAG TATA CACACACACACCAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCA GCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCCAAAGC AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACAT AAGACNATGAGCAAATACATGTTCTTTGTAAAGGNGGAGCGCCATGCAAGAACCG ]
[+] EMBL BX612122 [ GCAGAAGCGTTGACACGTTCCGTTTACCCCTTCTGGCTTGAGACGTTTAAAAGGGAGAAAAGTCCCCCCAGAATGACCCAATTGAAG CAACAAAAAAAAA CA GGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATTC ]
[+] EMBL BX627906 [ AGAG TATA CACACACACACCAAAAGGGAATGTAATTGAATGC AACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCA GCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGC AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATAT ]
[+] EMBL BX615071 [ GAAATCCTTTGAAAGGAGGGCAAACGTATACAAGAGCACGTTGGCGTCTCGCCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCA GCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCCAAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTACCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGC AGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCG TTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTGAACGAG ]
[+] EMBL CNS08GCW [ gATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGGAAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGAGGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGA TTTCGTCCAAACGCTTTTCCTTTCGACAGTTGAGAGTTTTCGTTTGCTTTTCTTTGTTTTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGAGCAAACAACTAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAAGTGGAGCACCATGCAAGAACCGATAAGCCCTAAAAAACCTAGAAATCCACGGCTTCTGATATCTTTCCGCGTTTGGAAACCGCACTAAATACCAATATTTAAAATTTGGGCCCACTCCCCTCTGAAAGGGGCTGAAAGAGTTAGTGCCGCTTCAGACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACATGAAAC]
consensusID : consensus_9385#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 433 fasta sequence
[GATCCCCGAGGTTAATCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCTGCCGCCTCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACAAAAAAAAA]
[+] EMBL AL695043 [GATCCCCGAGGTTAATCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCAATATAAAATAATACGGCTGCCGCCTCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGTGCGTAGTGAAAGCAATCATAAAGCAAAACGCGAAAAGAAAGAAGGGAGGCTGATAAGCGATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATACAGAAACTGAGTCAATGTTTAAAAACACATAAAACACACACCCACTTGCTCTAAAACACACGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTCGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCAATTGAAGCAACAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9385#1 CTGGGGGTGAAGCATAAAAATCAAGTAAACAATAATTGTAATTTATTCCATCTCGAAAGG 60
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 ------------------------------------------------------------
consensus_9385#1 AGCTAATTGGCACGAATTCTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCA 120
consensus_9385#2 -GATCCCCGAGGTTAAT-CTAAGCATTACTCGCAGCAGCAGCAGTAGTAGTACGCATGCA 58
consensus_9385#0 ------------------------------------------------------------
consensus_9385#1 ATATAAAATAATACGGCAGCCGCCCCCCCCACGGCGCGTCCTTCCCACGGGCAATCGTGT 180
consensus_9385#2 ATATAAAATAATACGGCTGCCGCCTCCCC-ACGGCGCGTCCTTCCCACGGGCAATCGTGT 117
consensus_9385#0 ---------------------------CCGCGGACGCGTGG---GCGCGGGCAATCGTGT 30
** * ***** * *************
consensus_9385#1 GCGTAGTGAAAGCAATCATAAAGCAAAAA-CGCGAAAAGAAAGAAGGGAGGCTGATAAGC 239
consensus_9385#2 GCGTAGTGAAAGCAATCATAAAGCAAAA--CGCGAAAAGAAAGAAGGGAGGCTGATAAGC 175
consensus_9385#0 GCGTAGTGAAAGCAATCATAAAGCAAAAAACGCGAAAAGAAA--AGGGAGGCTGATAAGC 88
**************************** ************ ****************
consensus_9385#1 GATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATAC 299
consensus_9385#2 GATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATAC 235
consensus_9385#0 GATGCAAAGCCAAATGATGAACGTTAAACTATCCTAGACATGTGGACTGCAAAACAATAC 148
************************************************************
consensus_9385#1 AGAAACTGAGTCAATGTTTAAAAACACATAAAAACACACACCCACTTGCTCTAAAACACA 359
consensus_9385#2 AGAAACTGAGTCAATGTTTAAAAACACATAAAA-CACACACCCACTTGCTCTAAAACACA 294
consensus_9385#0 AGAAACTGAGTCAATGTTTAAAAACACATAAAA-CACACACCCACTTGCTCTAAAACACA 207
********************************* **************************
consensus_9385#1 CGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTTT 419
consensus_9385#2 CGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTT- 353
consensus_9385#0 CGCCCTTTTCATGCAATATTTTTGAAGGTAGCACCCGGGGGCAGAAGCGTTGACACGTT- 266
***********************************************************
consensus_9385#1 CTTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCA 479
consensus_9385#2 CGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCCCAGAATGACCCA 413
consensus_9385#0 CGTTTACCCCTTCTTGCTTGAGACGTTTAAAAGGTAGAAAAGTCCCCC-AGAATGACCCA 325
* ********************************************** ***********
consensus_9385#1 ATTGAAGCAAAAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTG 539
consensus_9385#2 ATTGAAGCAACAAAAAAAAA---------------------------------------- 433
consensus_9385#0 ATTGAAGCAAAAAAACAGGGTAAATTGTGAAGAGCGAGACGAATGAACACAAGAGTGATT 385
********** **** *
consensus_9385#1 ATTCGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCAT 599
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 CGCATTGTTGAGACTACCTATATTACTACAACTAGCATTTGAGTAGACGTTGGCCATTTG 445
consensus_9385#1 TCGCGGTTTTAGATAACTAGCAACAAAAAAGGGAAGAGAGAGTATACACACACACACAAA 659
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 CGGTTTTAGATGACTAGCAACAAAAAAGGGAAGAGAGAGAGAGTATACACACACAAAAAG 505
consensus_9385#1 AAGGGAATGTAATTGAATGCAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGG 719
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 GGAATGTAATTGAATGCAAACTAGCAGAGGACGCAAAGTATTGAAATCCTTTGAAAGGAG 565
consensus_9385#1 AGGGCAAACGTATACAAGAGCACGTTGGCGTCTCACCACACCACCAACACAGAGCGATGG 779
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 GGCAAACGTATACAAGAGCACGTTGGCGTCTCACTACACCACCAACACAGAGCGATGGAA 625
consensus_9385#1 AAAAAGTTAAACTTTTCATTTTCCTTTAGTCAACGCTACGGACGCTACGGTGAGTGAGGA 839
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 AAAGTTAAACTTTTCATTTTCCTTTAGTCAGCTACGGACGCTATGGAGAGGAAGAACCTG 685
consensus_9385#1 GGAAGAACCTGGAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTA 899
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 GAACCGGCCGGATTAGTATTAGTGAGACAGTGTTTCTTCTTGCAAACTAGATTTTCGTCC 745
consensus_9385#1 GATTTCGTCCAAACGCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGTT 959
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 AAACCCTTTTCCTTTCGAGAGTTGAGAGTTTTCGTTTGCTTTTCCTTGGTTTATTTCTTA 805
consensus_9385#1 TTATTTCTTACCTAAATATCAAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCA 1019
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 CCTATATATCCAATAAAAGCAGATTTTAGCACCACACAACACTGTGGCCAGCTCGTCGTG 865
consensus_9385#1 GCTCGTCGTGGTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCAAACAAC 1079
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 GTAGGATGATTGATTGATAATCAAAAGCAGAGAGAGAGAGAGCAAACAACTAATCACCAA 925
consensus_9385#1 TAATCACCAATCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGG 1139
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 TCACAGCAACATAAAGACAATGAGCAAATACATGTTCTTTGTAAAGGTGGAGCGCCATGC 985
consensus_9385#1 AGCGCCATGCAAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCT 1199
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 AAGAACCGATAAGCCCTATAAAACCTAGAAATCCACGGCTTCAGATATCTTTCCGCGTTT 1045
consensus_9385#1 TTCCGCGTTGGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGA 1259
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 GGAAACCGCACTAAATATCAATATTTCCATTTTGCGCCCACTCCCCTCTGAAAAGGACTG 1105
consensus_9385#1 AAAGGACTGAACGAGTTAGTGCCGCTTCAGACTGTTCCGACAAGACCGAGCGGACGTTAA 1319
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 AACGAGAGGACATGAAATCCAATTCTCTCCTATCGCTGCACCAGTTAGTGCCGCTTATAG 1165
consensus_9385#1 GTTAAGAAAACATGAAAC------------------------------------------ 1337
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 ACTGTTCCGACAAGACCGAGCGGACGTTAAGTTAAGAAAACAAGAAACACCATGCAAGCG 1225
consensus_9385#1 ------------------------------------------------------------
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 AGAAGAGAGGGTGCGAAAGAGGCTACCACAAGGGCGGCGCAATCCCGTATATACTACTCA 1285
consensus_9385#1 ------------------------------------------------------------
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 GCTACAACTACACATGTATTCTGGAGCCGGTGTGCTAAAACAAAAACAAAAAAAAAAACA 1345
consensus_9385#1 ------------------------------------------------------------
consensus_9385#2 ------------------------------------------------------------
consensus_9385#0 CTGCAAGAGATTTAATAATATATTTTAGGTTAACAAAAACCAAAAAAANTNNCAACAAAA 1405
consensus_9385#1 ------------
consensus_9385#2 ------------
consensus_9385#0 ANGCAGCATGTG 1417
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||