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Anopheles gambiae
cluster # 9398 cluster # 9398       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9398#0 length = 1056 sequences # 11  
consensus_9398#1 length = 969 sequences # 5  

consensusID : consensus_9398#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1056
fasta sequence
                              [CTGGAATTTCAAAACAAAACACATCGCGACCGGGAAACACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCGCCATGCCGCAAGATACGAAGCGAATAAATGGACCAGAATTTACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTGCAGGAAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAACAAATTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCCCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGC-AAGCATGACCGCGGCACTGACCAGCGCCCTGAACCCATCC-GTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCGGCACTGGCGGTGGCGATAACGGCGGCCGGTCTTGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAAGCTG-CCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCC-GGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAACACACACTCTTGGTAAAAAAA]

[+] EMBL CNS09LVH             [CTGGAATTTCAAAACAAAACACATCGCGACCGGGAAACACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCACCATGCCGCAAGATACGAAGCGAATAAATGGACCAGAACTTACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTGCAGGCAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGC AAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCC GTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGGCGGCCGGCCTTGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAA CTG CCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCA                                                                                                            ]
[+] EMBL BM597005             [                                     CACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCGCCATGCCGCAAGATACGAAGCGAATAAATGGACCAGAATTTACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTGCAGGAAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAACAAATTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCCCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGCGAAGCATGACCGCGGCACTGACCAGCGCCCTGAACCCATCC GTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCGGCACTGGCGGTGGCGATAACGGCGGCCGGTCTTGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGT                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09JP0             [                                                                  agctCATTTACCGCCATGCCGCAAGATACGAAGCGAATAAATGGACCAGAATTTACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTGCAGGAAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAACAAATTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCCCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGC AAGCATGACCGCGGCACTGACCAGCGCCCTGAACCCATCCGGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCGGCACTGGCGGTGGCGATAACGGCGGCCGGTCTTGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTGGTCATGGATCCTACAGCGGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAA CTGACCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACATCTGCAGGAGCTGGAGCTGGAGAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGGAAGATCGATGATGGAAAGAGAACAATAAAACACA                          ]
[-] EMBL CNS09JP1             [                                                                                                     AATAAATGGACCAGAATTTACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTGCAGGAAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCAAGCTGGGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAACAAATTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCCCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGCGAAGCATGACCGCGGCACTGACCAGCGCCCTGAACCCATCC GTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCGGAACTGGCGGTGGCGATAACGGCGGCCGGTCTTGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTGGTCATGGATCCTACAGCGGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAAGCTG CCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACAt                                                                                                                                                           ]
[-] EMBL CNS09LRR             [                                                                                                       TAAATGGACCAGAACTTACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTGCAGGCAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGCGAAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCC GTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGGCGGCCGGCCTTGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGAT CTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAAGCTG CCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCC GGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAACACACACTCTTGGTAAAAAAA]
[+] EMBL BX613064             [                                                                                                                     TTTACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTGCAGGAAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAACAAATTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08F3R             [                                                                                                                                                                                                GGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAACAAATTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCCCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGA C AAGCATGACCGCGGCACTGACCAGCGCCCTGAACCCATCC GTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCGGCACTGGCGGTGGCGATAACGGCGGCCGGTCTTGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCCACGGCCG                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS09LYX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGGGGATCGTGTCATCATGGAT CTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAAGCTG CCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGGGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCC GGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAACACAC                ]
[-] EMBL CNS09IA9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAAGCTG CCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGGGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGTTCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCC GGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAAAACAAACTCTTGGT       ]
[-] EMBL CNS09I98             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACAC                                                                                                                                                           ]
[-] EMBL CNS08F3S             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gtTCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACAt                                                                                                                                                           ]


>consensus_9398#0 CTGGAATTTCAAAACAAAACACATCGCGACCGGGAAACACGTTTTGGTGCTGGGCGAACG AATTGAATCGCATTTACCGCCATGCCGCAAGATACGAAGCGAATAAATGGACCAGAATTT ACCCGATCGTACCGGATCCATTGCAAAGCCAACGCGCCAAAACCGTTCGACGAGCGGTTG CAGGAAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGC AAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTG GGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAACAAA TTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCCCGGCAGTG AGAAAAACGCACCAAACGGATGCGCGCGAGCAAGCATGACCGCGGCACTGACCAGCGCCC TGAACCCATCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACG TGCTGGAAGATGATGGATCGGCACTGGCGGTGGCGATAACGGCGGCCGGTCTTGCGCTGG GCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGG ATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGG AGGAAAATCATGGGCTGGTGATGCTGGCGAAGCTGCCCACGCTGGACCAGGTGCCGGAGA TTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATG CGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACAC ACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGG AAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGAAGAGAACA ATAAAACACAAAAAACACACACTCTTGGTAAAAAAA



consensusID : consensus_9398#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 969
fasta sequence
                              [ACCGGGAAACACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCACCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGA-C-AAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGG-AAAATCATGGGCTGGTGATGCTGGCGAA-CTGCCCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAACACACACTCTTGGT-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCATGTTCCCCGCC]

[+] EMBL CNS09N7S             [ACCGGGAAACACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCACCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGA C AAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAAATCATGGGCTGGTGATGCTGGCGAA CTGCCCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAACACACACTCTTGGT AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCATGTTCCCCGCC]
[+] EMBL CNS09I97             [  CGGGAAACACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCACCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGA G AAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGG AAAATCATGGGCTGGTGATGCTGGCGAA CTGGCCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAAGG                                                                                                              ]
[+] EMBL CNS09IA8             [     GAAACACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCACCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGC AAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGG AAAATCATGGGCTGGTGATGCTGGCGAA CTGTCCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAACACACACTCTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCC            ]
[+] EMBL CNS09LYW             [       AACACGTTTCGGTGCTGGGCGAACGAATTGAATCGCATTTACCACCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGGCAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGA G AAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGG AAAATCATGGGCTGGTGATGCTGGCGAA CTGCCCCACGCTGGACCA                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09N7T             [                                                                                                                                                                                                                                                                                                                                                                                                                                ATGCGCGCGAGCGAAGCATGGCCGCGGAATTGACCAGCGCCCTGAACCCGTCCTTCTGCCGGCATCTTTTTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTCATCATGGATCC ACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGG AAAATCATGGGCTGGTGATGCTGGCGAAGCTG CCCACGCTGGACCAGGTGCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGGGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGTGGCGTTCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGAAGAGAACAATAAAACACAAAAAAAACAAAC                                                        ]


>consensus_9398#1 ACCGGGAAACACGTTTTGGTGCTGGGCGAACGAATTGAATCGCATTTACCACCATGGCCG CGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGA TAGACGTGTTTGCGAACGTGCTGGAAGATGATGGATCTGCGCTGGCGGTGGCGATAACGG CAAACGAAAGGATGGTCGTCGCCTGCAGGAAAGCCGCAAATATTATGCAAAAATCGGCGT AGTTTCAACGGCCAAAGGATCGGCGTACGTCGAGCTGGGCAACACGAAAGTGATCGTGTC CGTGTTCGATCCGCGCGAAATACCAAAGCAGAATAAATTCTGCGAGCTGGGAGAGCTGTT CTGTGACTTGAAGTTTTCGCCCTTCGCCTCGGCAGTGAGAAAAACGCACCAAACGGATGC GCGCGACAAGCATGGCCGCGGCACTGACCAGCGCCCTGAACCCGTCCGTCTGCCGGCATC TGTTTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGTGCTGGGGGATCGTGTC ATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGGCCACACGGAGGAAAAT CATGGGCTGGTGATGCTGGCGAACTGCCCCACGCTGGACCAGGTGCCGGAGATTTGGCAG TACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCAGCTGAATGCGGCTTGT GGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGTGAAAACACACCTACAG GAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGACAAGGAGGAAGGTGCT GCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGAAGAGAACAATAAAACA CAAAAAACACACACTCTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCATG TTCCCCGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9398#0      CTGGAATTTCAAAACAAAACACATCGCGACCGGGAAACACGTTTTGGTGCTGGGCGAACG 60
consensus_9398#1      ----------------------------ACCGGGAAACACGTTTTGGTGCTGGGCGAACG 32
                                                  ********************************

consensus_9398#0      AATTGAATCGCATTTACCGCCATGCCGCAAGATACGAAGCGAATAAATGGACCAGAATTT 120
consensus_9398#1      AATTGAATCGCATTTACCACCATGGC-CGCGGCACTGACCAGCGCCCTGAACCCG--TCC 89
                      ****************** ***** * *  *  **  * *       ** *** *  *  

consensus_9398#0      ACCCGATCGTACCGGATCC---ATTGCAAAGCCAACGCGC---CAAAACCGTTCGACGA- 173
consensus_9398#1      GTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTTTGCGAACGTGCTGGAAGAT 149
                        * *   * * * * * *   **    *     *** *    * **   * * ** ** 

consensus_9398#0      -GCGGTTGCAGGAAGCCCTCGGAAAGGACGGCAAACGAAAGGATGGTCGTCGCCTGCAGG 232
consensus_9398#1      GATGGATCTGCGCTGGCGGTGGCGATAACGGCAAACGAAAGGATGGTCGTCGCCTGCAGG 209
                         ** *    *  * *   **  *  *********************************

consensus_9398#0      AAAGCCGCAAATATTATGCGAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACG 292
consensus_9398#1      AAAGCCGCAAATATTATGCAAAAATCGGCGTAGTTTCAACGGCCAAAGGATCGGCGTACG 269
                      ******************* ****************************************

consensus_9398#0      TCGAGCTGGGCAACACGAAAGTGATCGTTTCCGTGTTCGATCCGCGCGAAATACCAAAGC 352
consensus_9398#1      TCGAGCTGGGCAACACGAAAGTGATCGTGTCCGTGTTCGATCCGCGCGAAATACCAAAGC 329
                      **************************** *******************************

consensus_9398#0      AGAACAAATTCTGCGAGCTGGGAGAGCTGTTCTGCGACTTGAAGTTTTCGCCCTTCGCCC 412
consensus_9398#1      AGAATAAATTCTGCGAGCTGGGAGAGCTGTTCTGTGACTTGAAGTTTTCGCCCTTCGCCT 389
                      **** ***************************** ************************ 

consensus_9398#0      CGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGAGCAAGCATGACCGCGGCACTGAC 472
consensus_9398#1      CGGCAGTGAGAAAAACGCACCAAACGGATGCGCGCGA-CAAGCATGGCCGCGGCACTGAC 448
                      ************************************* ******** *************

consensus_9398#0      CAGCGCCCTGAACCCATCCGTCTGCCGGCATCTGTTTCCCAATCTGCAGATAGACGTGTT 532
consensus_9398#1      CAGCGCCCTGAACCCGTCCGTCTGCCGGCATCTGTTTCCCAAT----------------- 491
                      *************** ***************************                 

consensus_9398#0      TGCGAACGTGCTGGAAGATGATGGATCGGCACTGGCGGTGGCGATAACGGCGGCCGGTCT 592
consensus_9398#1      ------------------------------------------------------------
                                                                                  

consensus_9398#0      TGCGCTGGGCGATGCGTGCGTCCCAATGTTTGACATCGTGACGGCGGCAACGGCCGGCGT 652
consensus_9398#1      ---------------------------GTTTGACATCGTGACGGCGGCAACGGCCGGCGT 524
                                                 *********************************

consensus_9398#0      GCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGG 712
consensus_9398#1      GCTGGGGGATCGTGTCATCATGGATCCTACGGCCGAGGAGGAGGCGCTGTGTTTGGCCGG 584
                      ************************************************************

consensus_9398#0      CCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAAGCTGCCCACGCTGGACCAGGT 772
consensus_9398#1      CCACACGGAGGAAAATCATGGGCTGGTGATGCTGGCGAACTGCCCCACGCTGGACCAGGT 644
                      ***************************************    *****************

consensus_9398#0      GCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCA 832
consensus_9398#1      GCCGGAGATTTGGCAGTACGGGTTCGTGGATGTGGAGCTGCTGTGGGACACGTGCAAGCA 704
                      ************************************************************

consensus_9398#0      GCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGT 892
consensus_9398#1      GCTGAATGCGGCTTGTGGCGATCTCGTGCCGGTAGTGCAGCATCTGCTGGTGAGCAAAGT 764
                      ************************************************************

consensus_9398#0      GAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGA 952
consensus_9398#1      GAAAACACACCTACAGGAGCTGGAGCTGGAAAGTGATGAAGAGGAGGAAGCTGAGCAGGA 824
                      ************************************************************

consensus_9398#0      CAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGA 1012
consensus_9398#1      CAAGGAGGAAGGTGCTGCCGAAGCGTCAACCCAGGGTTCCGGGGAAGATCGATGAAGGGA 884
                      ************************************************************

consensus_9398#0      AGAGAACAATAAAACACAAAAAACACACACTCTTGGTAAAAAAA---------------- 1056
consensus_9398#1      AGAGAACAATAAAACACAAAAAACACACACTCTTGGTAAAAAAAAAAAAAAAAAAAAAAA 944
                      ********************************************                

consensus_9398#0      -------------------------
consensus_9398#1      AAAAAAAAGGCCCATGTTCCCCGCC 969
                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)