Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9403 cluster # 9403       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9403#0 length = 1222 sequences # 15  
consensus_9403#1 length = 215 sequences # 1  

consensusID : consensus_9403#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1222
fasta sequence
                              [CCGATCTCGAGCCGCGCTGTACGGATTCTCTGTGGATGCTTTCTAGCCTGATCTG-AAAAAAAAAACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAACCATCCACGTCGAAGGCGAAAG-GGAAGAAAAAAG-ATGATGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCG-AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT-GG-TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGATA-CGACGGTGGTTAATATGGAAGGGGAGGA-TCAGGCGGAAGTCATGAACGATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAGAACTATACCGACATCCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGGATTTGAAGCGCAACGAGAGGGACATTACGACACATCGACCGGAGGTGA-TTTTGAACAACTTTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGGGCGCACTGTTTCACTACGAACCAGAATTTCGCGGGCGTCGTGCTGTAACGTTCCACAATCAGCGTGATTACATCTTCTTTCGGCATCATCTGTACGAATTCGACAAGAA-CG-GAAAGCGTGTGAAACTGCGCGAACTGGGGCCACGATTTACGCTCAAGTTACGTTCTCTGCAGGTGGGACTGTTTGATGGCAAGTGTGGAGATTACGAATGGATGATTACCAACAAACGTCACCAGAT-GGAAAGCCGACGTAGATTCTTCCTGTAAAATAAAGTATCTGGCGG]

[+] EMBL BM609957             [CCGATCTCGAGCCGCGCTGTACGGATTCTCTGTGGATGCTTTCTAGCCTGATCT  AAAAAAAACACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAACCATCCACGTCGAAGGCGAAAG GGAAGAAAAAAG ATGATGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCG AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT GG TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTAATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGAAA CGACGGTGGTTAATATGGAAGGGGAGGA CCAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS0969R             [    TCTCGAGCCGCGCTGTACGGATTCTCTGTGGATGCTTTCTTGCCTGATCTG AAAAAAAAAACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAACCATCCACGTCGAAGGCGAAAGAGGAAGAAAAAAGCATGACGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCG AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGTGGG TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAACTTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGATA CGACGGTGGTTAATATGGAAGGGGAGGA TCAGGCGGAAGTCATGAACAATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAGAACTATACCGACATCCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGGATTTGAAGCGCAACGAGAGGGACATTACGACACATCGACCGGA GTGA TTTTGAACAACTTTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGGGCGCACTGTTTCACTACGAACCAGAATTTCGCGGGCGTCGTGCTTTTTTGTTCCACAATCAGCGTGATTACATCT                                                                                                                                                                                                                   ]
[+] EMBL BM618493             [                  ccgCGGATTCTCTGTGGATGCTTTCTTGCCTGATCTG  AAAAAAAAACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAACCATCCACGTCGAAGGCGAAAG GGAAGAAAAAAG ATGACGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCG AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT GG TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGATA CGACGGTGGTTAATATGGAAGGGGAGGA TCAGGCGGAAGTCATGAACGATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM601787             [                   ccgGGATTCTCTGTGGATGCTTTCTAGCCTGATCTGAAAAAAAAAAACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAAGAGGAACCTAAACCATCCACGTCGAAGGCGAAAG GGAAGAAAAAAG ATGATGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCG AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT GG TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGATA CGACGGTGGTTAATATGGAAGGGGAGGATTCAGGCGGAAGTCATGAACGATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTCAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS096RE             [                                        TTCTAGCCTGATCTG AAAAAAAAATCGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAACCATCCACGTCGAAGGCGAAAG GGAAGAAAAAAG ATGATGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCG AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT GG TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCAAAAAAGACGCGCAA CTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGAGA CGACGGTGGTTAATATGGAAGGGGAGGA TCAGGCGGAAGTCATGAACGATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAACGCTATACGCGAGAACTATACCGACATTCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAA                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM576542             [                                            ccgCTGATCT  AAAAAAAACACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAACCATCCACGTCGAAGGCGAAAG GGAAGAAAAAAG ATGATGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCG AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT GG TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTAATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGAAA CGACGGTGGTTAATATGGAAGGGGAGGA CCAGGCGGAAGTCATGAACGATCTGGCAAACGATGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTCAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGGCGAATGATTCCAAATGCAAAAACCTTCCGGCGTAACAAGACGCAACTGAAGCGGGTGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09FCW             [                                                             AAAATCGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAACCATCCACGTCGAAGGCGAAAG GGAAGAAAAAAG ATGATGGAAAACCGAAGCGTAAACGACTGCAGGACTATTTGGATGAGAAGGCAGCCCGCGCAGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCG CGTGGG TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAA CCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGATAGAGGGCATACCATCCGCTCCGAACCATACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09CUD             [                                                                                                                                                                                             ACTATTTGGATGAGAAGGCAGCCCGCG AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT GGCTCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAA CTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGAGA CGACGGTGGTTAATATGGAAGGGGAGGA TCAGGCGGAAGTCATGAACGATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAACGCTATACGCGAGAACTATACCGACATTCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGGATTTGAAGCGCAACGAGAGGGACATTACAACACATCGACCGGA GTGATTTTTAAACAAC                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX620466             [                                                                                                                                                                                                                         AGGTAGCCGAGCGGGCGGAAGAGTTACTGCGGAAACGGCGTCGCCGT GG TCTGGCGGACGATGAATAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGAGGGCATACCATCTGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGAGA CGACGGTGGTTAATATGGAAGGGGAGGA TCAGGCGGAAGTCATGANCGATCTGGCAAACGACGAGTTTTGCGAGTATTATCANAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAGAACTATACCGACATCCTGGTGGTGAACGAAAACAGGAAGANACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCNACTTTAAAGACTTGAAGGATTT                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS0969S             [                                                                                                                                                                                                                                                           aacaCGTCGCCGT GT TCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGTTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGATA CGACGGTGGTTAATATGGAAGGGGAGGA TCAGGCGGAAGTCATGAACAATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAGAACTATACCGACATCCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGGATTTGAAGCGCAACGAGAGGGACATTACGACACATCGACCGGAGGTGA TTTTGAACAACTTTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGGGCGCACTGTTTCACTACGAACCAGAATTTCGCGGGCGTCGTGCTGTAACGTTCCACAATCAGCGTGATTACATCTTCTTTCGGCATCATCTGTACGAATTCGACAAGAA CG GAAAGCGTGTGAAACTGCGCGAACTGGGGCCACGATTTACG                                                                                                                                    ]
[+] EMBL CNS09N56             [                                                                                                                                                                                                                                                                                                                     CGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCAAACGTATGCAGGGGGCCAAGGGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS096RF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCTGCGCGAGAAGGATGAGAGCGACGGTGGTTAATATGGAAGGGGAGGA TCAGGCGGAAGTCATGAACGATCTGGCAAACGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAGAACTATACCGACATTCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGGTTTTGAAGCGCAACGAGAGGGACATTACAACACATCGACCGGAGGTGA TTTTGAACAACTTTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGAGCGCACTGTTTCACTACGAACCAGAATTTCGCGGGCGTCGTGCAGTAACGTTCCACAATCAGCGTGATTACATCTTCTTTCGGCATCATCTGTACGAATTCGACAAGAA CG GCAAGCGTGTGAAACTGCGAGAACTGGGTCCACGATTTACGCTCAAGTTACGTTCTCTGCAGGTGGGACTGTTTGATGGCAAGTGTGGAGATTACGAATGGATGATTACCAACAAACGTCACCAGAT GGAAAGCCGACGTAGATTCTTCCTGTAAAATAAAGTATCTGG   ]
[+] EMBL BM649614             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgCGACGAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAAAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAGAACTATACCGACATCCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGGATTTGAAGCGCAACGAGAGGGACATTACGACACATCGACCGGAGGTGA TTTTGAACAACTTTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGGGCGCACTGTTTCACTACGAACCAGAATTTCGCGGGCGTCGTGCTGTAACGTTCCACAATCAGCGTGATTACATCTTCTTTCGGCATCATCTGTACGAATTCGACAAGAA CG GAAAGCGTGTGAAACTGCGCGAACTGGGGCCACGATTTACGCTCAAGTTGCGTTCTCTGCAGGTGGGACTGTTTGATGGCAAGTGTGGAGATTACGAATGGATGATTACCAACAAGCGCCACCAGATGGGAAAGCCGACGTAGATTCTTCCTGTAAAATAAAGTATCTCACGG]
[-] EMBL CNS09FCX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ggAGGCTTGCTGC TATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGGATTTGAAGCGCAACGAGAGGGACATTACAACACATCGACCGGAGGTGA TTTTGAACAACTTTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGGGCGCACTGTTTCACTACGAACCAGAATTTCGCGGGCGTCGTGCAGTAACGTTCCACAATCAGCGTGATTACATCTTCTTTCGGCATCATCTGTACGAATTCGACAAGAACCGCGCAAGCGTGTGAAACTGCGAGAACTGGGTCCACGATTTACGCTCAAGTTACGTTCTCTGCAGGTGGGACTGTTTGATGGCAAGTGTGGAGATTACGAATGGATGATTACCAACAAACGTCACCAGAT GGAAAGCCGACGTAGATTCTTCCTGTAAAATAAAGTt        ]
[-] EMBL CNS09N57             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGATTGACTATTGGTCGCATGTTGGGCGCACT TTTCACTACGAACCAGATTTTCGCGGGCGTCGTGCTGTAACGTTCCACAATCAGCGTGATTACATCTTCTTTCGGCATCATCTGTACGAATTCGACAAGAA CG GAAAGCGTGTGAAACTGCGCGAACTGGGGCCACGATTAACG                                                                                                                                    ]


>consensus_9403#0 CCGATCTCGAGCCGCGCTGTACGGATTCTCTGTGGATGCTTTCTAGCCTGATCTGAAAAA AAAAACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAAC CATCCACGTCGAAGGCGAAAGGGAAGAAAAAAGATGATGGAAAACCGAAGCGTAAACGAC TGCAGGACTATTTGGATGAGAAGGCAGCCCGCGAGGTAGCCGAGCGGGCGGAAGAGTTAC TGCGGAAACGGCGTCGCCGTGGTCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACGT TCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTCA AACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTAG AGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGATACGA CGGTGGTTAATATGGAAGGGGAGGATCAGGCGGAAGTCATGAACGATCTGGCAAACGACG AGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCGA CACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCAA AAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAGA ACTATACCGACATCCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTTA TTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAGG ATTTGAAGCGCAACGAGAGGGACATTACGACACATCGACCGGAGGTGATTTTGAACAACT TTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGGGCGCACTGTTTCACTACGAAC CAGAATTTCGCGGGCGTCGTGCTGTAACGTTCCACAATCAGCGTGATTACATCTTCTTTC GGCATCATCTGTACGAATTCGACAAGAACGGAAAGCGTGTGAAACTGCGCGAACTGGGGC CACGATTTACGCTCAAGTTACGTTCTCTGCAGGTGGGACTGTTTGATGGCAAGTGTGGAG ATTACGAATGGATGATTACCAACAAACGTCACCAGATGGAAAGCCGACGTAGATTCTTCC TGTAAAATAAAGTATCTGGCGG



consensusID : consensus_9403#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 215
fasta sequence
                              [CACGAACTTCCGCACGAGTGTAGCTGATCTGAAAAAAAACGCCNGAAAAATTGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACTAAACCATCCACGTCGAAAGCGAAAGGGAAGAAAAAAGATGATGGAAAACCGAAGCGTAAACGACTGCCAGGACTATTTGGATGAGAAGGCAGCCCGCGAGGTAGCCGAGCGGGCGGAAGAGTTA]

[+] EMBL BX469716             [CACGAACTTCCGCACGAGTGTAGCTGATCTGAAAAAAAACGCCNGAAAAATTGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACTAAACCATCCACGTCGAAAGCGAAAGGGAAGAAAAAAGATGATGGAAAACCGAAGCGTAAACGACTGCCAGGACTATTTGGATGAGAAGGCAGCCCGCGAGGTAGCCGAGCGGGCGGAAGAGTTA]


>consensus_9403#1 CACGAACTTCCGCACGAGTGTAGCTGATCTGAAAAAAAACGCCNGAAAAATTGTCTAGCA GCGATAGTGATAGTGAATTTCAGGAGGAACTAAACCATCCACGTCGAAAGCGAAAGGGAA GAAAAAAGATGATGGAAAACCGAAGCGTAAACGACTGCCAGGACTATTTGGATGAGAAGG CAGCCCGCGAGGTAGCCGAGCGGGCGGAAGAGTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9403#0      CCGATCTCGAGCCGCGCTGTACGGATTCTCTGTGGATGCTTTCTAGCCTGATCTGAAAAA 60
consensus_9403#1      -------------------CACGAACT-TCCGCACGAG---TGTAGC-TGATCTGAAAAA 36
                                          *** * * ** *     *   * **** ************

consensus_9403#0      AAAAACGCCGAAAAATGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAACCTAAAC 120
consensus_9403#1      AAACGCCNGAAAAATTGTCTAGCAGCGATAGTGATAGTGAATTTCAGGAGGAAC-TAAAC 95
                      ***  *    **** *************************************** *****

consensus_9403#0      CATCCACGTCGAAGGCGAAAGGGAAGAAAAAAGATGATGGAAAACCGAAGCGTAAACGAC 180
consensus_9403#1      CATCCACGTCGAAAGCGAAAGGGAAGAAAAAAGATGATGGAAAACCGAAGCGTAAACGAC 155
                      ************* **********************************************

consensus_9403#0      TGC-AGGACTATTTGGATGAGAAGGCAGCCCGCGAGGTAGCCGAGCGGGCGGAAGAGTTA 239
consensus_9403#1      TGCCAGGACTATTTGGATGAGAAGGCAGCCCGCGAGGTAGCCGAGCGGGCGGAAGAGTTA 215
                      *** ********************************************************

consensus_9403#0      CTGCGGAAACGGCGTCGCCGTGGTCTGGCGGACGATGAAGAAGATCCAGAGGAGACAACG 299
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      TTCCCGGTGATCAACCCGATGAATTTTGTCAAGAACAAGGAGATCCGCCACAAGCAGTTC 359
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      AAACGTATGCAGGGGGCCAAGAGGAAGGAAGAAAAGGAGGCCAAAAAGACGCGCAAGCTA 419
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      GAGGGCATACCATCCGCTCCGAACCATACGATCGAAAGTCTGCGCGAGAAGGATGATACG 479
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      ACGGTGGTTAATATGGAAGGGGAGGATCAGGCGGAAGTCATGAACGATCTGGCAAACGAC 539
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      GAGTTTTGCGAGTATTATCAGAAGAGCTACGAACCGAGGGTGATGATAACGTTTAACGCG 599
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      ACACCGCACATGGTAACGCGCAAGTTTGCATCCCTGCTGCGACGAATGATTCCAAATGCA 659
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      AAAACCTTCCGGCGTAATAAGACGCAACTGAAGCGGGTGTGCAAGAGCGCTATACGCGAG 719
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      AACTATACCGACATCCTGGTGGTGAACGAAAACAGGAAGAAACCGGAAGGCTTGCTGCTT 779
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      ATTCACCTGCCCGACGGACCGACGGCACACTTCAAAGTAAGCAACTTTAAAGACTTGAAG 839
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      GATTTGAAGCGCAACGAGAGGGACATTACGACACATCGACCGGAGGTGATTTTGAACAAC 899
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      TTTACCACTCGCCTGGGATTGACTATTGGTCGCATGTTGGGCGCACTGTTTCACTACGAA 959
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      CCAGAATTTCGCGGGCGTCGTGCTGTAACGTTCCACAATCAGCGTGATTACATCTTCTTT 1019
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      CGGCATCATCTGTACGAATTCGACAAGAACGGAAAGCGTGTGAAACTGCGCGAACTGGGG 1079
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      CCACGATTTACGCTCAAGTTACGTTCTCTGCAGGTGGGACTGTTTGATGGCAAGTGTGGA 1139
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      GATTACGAATGGATGATTACCAACAAACGTCACCAGATGGAAAGCCGACGTAGATTCTTC 1199
consensus_9403#1      ------------------------------------------------------------
                                                                                  

consensus_9403#0      CTGTAAAATAAAGTATCTGGCGG 1222
consensus_9403#1      -----------------------
                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)