These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9441#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1004 fasta sequence [TCAGCAGTTTTTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA-ATGTAAATCACTAATACCTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTAT-GGCCAGATATGTTTTAATTTTTTTCCAGTAGGC] [+] EMBL CNS09DYB [TCAGCAGTTTTTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA ATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGACCCTCTTGATACCAGGTAACAATTTCGCTAAC ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTTCCCACTt ] [-] EMBL CNS08W1H [ CAGCAGTTTGTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA ATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAATACTCGGTTTTTTTTTTGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAAC ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTAT GGCCAGATAT ] [+] EMBL CNS08W1I [ cTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCTTTTAACA ATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAAC ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAAAAAAAACCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAAAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGAAATGTTTTAATTTTTTTCCAGTAGGC] [+] EMBL CNS095E3 [ CAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCAGGTCTTTTAACACATATAAATCACTAATACCTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATT ] [+] EMBL CNS08DDV [ gccGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAATATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCAGGTCTTTTAACA ATATAAATCACTAATACCTTTCCATTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTTATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTTACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTTACGCCTGAaa ] [-] EMBL CNS08DDU [ TGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCAGGTCTTTTAACA ATATAAATCACTAATACCTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAAACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGTCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAA CGATCGTGTGCA ] [-] EMBL BX627863 [ TAATACNTTTCCGTTCAAGCGTCGCGCACTTTTGTCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAA CGATCG ] [-] EMBL BX623751 [ CTACCAACACTCGGTTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGA ] [-] EMBL BX622522 [ TTAAGATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTAGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGA ] [-] EMBL BM619840 [ CAAGGGCCACCGTCGCTTACACCGAAAAATGGTGCGCCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTACCGGCAGCGGGAAAACCGATCGTGTGCAGAG ] consensusID : consensus_9441#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 884 fasta sequence [TTTTTTTCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCCTTTAACAATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCG-ACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTTAAGCAATCCATCGAAGCCCAGTA] [-] EMBL CNS0930B [TTTTTTTCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAACCGGGTCCTTTAACAATGTAAATCACTAATACCTTTCCGTTTAAGCGTCGCGCACTTTTGTCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGGTTCAAATAATGTTAAGATATGGAACCATAATTGCATCTACCATATTCTCCCGTGTGGAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACCACTTGACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCG ACCGATTGCCCACTGCCCCGTAACGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGA AACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACG TGCCGCTG ] [+] EMBL CNS0930C [ GATTAAGAATTGCCGTTTTCTGGGAAATGCCATGAGCCAAGAGCCCCTTGAAACCAGGTAACAATTTCGCCAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGGGCGCCGCACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAAAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTTAAGCAATCCATCGAAGCCCAGTA] [-] EMBL CNS09DYA [ AATTGCCGTCTACTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAATTTCGCTAACACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCGCCG ACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATTGTCCATTTTTCTCCTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTCAAGCAATCC ] consensusID : consensus_9441#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 770 fasta sequence [TTGTTTTTACNNGGCCTTTGNAANCCGAAATTGANCTNACCCAACTCGAACGTGGGNCGAAGAGACCCAAAAGGGTGGGGTGNACCAACGCCGGTTTCGCGCCTGTTTAGNACACCTCTGGAGTAACAAATNNAATTGGGGTGTTGGCTTGCCTCCAAATGCCGCGGGAAGTTTTTGGGCCCNCAGGCGTGGGTNCCAGCCNCGGGCNCTGTTCCGGGTACCGTTTTGGGNAAGAACCAAGTGCGGCAATTTCTGTGTGAACGAATTATTTTTGTTGAGTCCCACCTTANCCACTGTTTTTTGTGTGGCCTTCCTCGANGGGGGGAAGTTAGGCTTCTGGCGAGTTCCCGGAATCGGAACAAGTTGACCATTTGGTCCCATCNTTGTCCTCGTGTCGGGCGTGATGCCGAGCCTCGGAACCAAGGTTCGCTCTGCTTCCTCACCGCCTGTCACTACCGAGTCCGGCAGCAGTTCGACAATCGACATCCTTGGCGATTTTGAAATCTTCTCCTTGTAATGTTGGCTTTCTCATCTGTGTAAATATGCCTTTGTTCTTTGACGAACTCTTGCCCGGATGCGCTTTGCCCGTGCGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCCTGAGAGAGCTCATAATTTGTGTTGCCGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTAATTATACCTGCTGGCTGATTCTGC] [-] EMBL AL696667 [TTGTTTTTACNNGGCCTTTGNAANCCGAAATTGANCTNACCCAACTCGAACGTGGGNCGAAGAGACCCAAAAGGGTGGGGTGNACCAACGCCGGTTTCGCGCCTGTTTAGNACACCTCTGGAGTAACAAATNNAATTGGGGTGTTGGCTTGCCTCCAAATGCCGCGGGAAGTTTTTGGGCCCNCAGGCGTGGGTNCCAGCCNCGGGCNCTGTTCCGGGTACCGTTTTGGGNAAGAACCAAGTGCGGCAATTTCTGTGTGAACGAATTATTTTTGTTGAGTCCCACCTTANCCACTGTTTTTTGTGTGGCCTTCCTCGANGGGGGGAAGTTAGGCTTCTGGCGAGTTCCCGGAATCGGAACAAGTTGACCATTTGGTCCCATCNTTGTCCTCGTGTCGGGCGTGATGCCGAGCCTCGGAACCAAGGTTCGCTCTGCTTCCTCACCGCCTGTCACTACCGAGTCCGGCAGCAGTTCGACAATCGACATCCTTGGCGATTTTGAAATCTTCTCCTTGTAATGTTGGCTTTCTCATCTGTGTAAATATGCCTTTGTTCTTTGACGAACTCTTGCCCGGATGCGCTTTGCCCGTGCGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCCTGAGAGAGCTCATAATTTGTGTTGCCGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTAATTATACCTGCTGGCTGATTCTGC] consensusID : consensus_9441#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 491 fasta sequence [AAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGG] [-] EMBL BX601709 [AAAAATGGTGCGCCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGCATTTTACGATTTTTTATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGCGGGAAAACGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACGCAACAGCGG] [-] EMBL CNS095E2 [ CCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATTGTCCACCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGCCGGCTGCTTCCTCACCGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTCTTTAATTTGCTTCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAA GGCCTCACGCCTGAGAGAGCTCATAATTTGTGTTGCCGGCGGC GGAAAACGATCGTGTGCAGAGTAT GGCCAGATATGTTTTAATTTTACGC ] [-] EMBL BX620551 [ TCTCATCTTTAATATCTTTGTTCTTGACGAACTCTTCCCGGATGCGTTGCCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTACGCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCTGAGA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9441#0 TCAGCAGTTTTTTGCTTGCAAGGGCAATCTAAACATTAACATCAAAATTTTATTTTGAAT 60 consensus_9441#1 ------------------------------------------------------------ consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 ------------------------------------------------------------ consensus_9441#0 ATGTCTATTGCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAAC 120 consensus_9441#1 ---TTTTTTTCTTAAAATTTACGGGATGAGGTGATGAGGTGCCTAACAAGCAAACAAAAC 57 consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 ------------------------------------------------------------ consensus_9441#0 CGGGTCTTTTAACAATGTAAATCACTAATACCTTTCCGTT-CAAGCGTCGCGCACTTTTG 179 consensus_9441#1 CGGGTCCTTTAACAATGTAAATCACTAATACCTTTCCGTT-TAAGCGTCGCGCACTTTTG 116 consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 ---------------------TTGTTTTTACNNGGCCTTTGNAANCCGAAATTGANCTNA 39 consensus_9441#0 TCGGTCCCGCTGTCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGG 239 consensus_9441#1 TCGGTCCTGCTGCCACTTTCAATAAACTCAAATTAGCTTCAAATTTCTACCAACACTCGG 176 consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 CCCAACTCGAACGTGGGNCGAAGAGACCCAAAAGGGT----GGGGTGNACCAACGCCGGT 95 consensus_9441#0 TTAAGATAATGTTAAGATA----TGGAACCATAATTGCATCTACCATATTCTCCCGTGTA 295 consensus_9441#1 TTCAAATAATGTTAAGATA----TGGAACCATAATTGCATCTACCATATTCTCCCGTGTG 232 consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 TTCGCGCCTGTTTAGNACACCTCTGGAGTAACAAATNNAATTGGGGTGTTGGCTTGCCTC 155 consensus_9441#0 GAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGACGGAGAGCAATTTAGAAACAACC 355 consensus_9441#1 GAAGGGTGTTAACGCTAAATTGAGGGGACAACAAAGAGGGAGAGCAATTTAGAAACAACC 292 consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 CAAATGC---CGCGGGAAGTTTTTGGGCCCNCAGGCGTGGGTNCCAGCCNCGGGCNCTGT 212 consensus_9441#0 ACTTG--ACCGTATCAGGCTCGAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGC 413 consensus_9441#1 ACTTG--ACCGTATCAGGCTCAAATTTAGGTAAGTAATCATCGTTGGGATTAAGAATTGC 350 consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 TCCGGGTACCGTTTTGGGNAAGAACCAAGTGCGGCAATTTCTGTGTGAACGAATTATTTT 272 consensus_9441#0 CGTCTA--------CTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAAT 465 consensus_9441#1 CGTCTA--------CTGGGAAATGCCATGAGCTAAGAGCCTCTTGATACCAGGTAACAAT 402 consensus_9441#3 ------------------------------------------------------------ consensus_9441#2 TGTTGAGTCCCACCTTANCCACTGTTTTTTGTGTGGCCTTCCTCGANGGGGGGAAGTTAG 332 consensus_9441#0 TTCGCTAACATACACACACGCAAACAAGGGGCACCGTCGCTTACACCGAAAAATGGTGCG 525 consensus_9441#1 TTCGCTAAC--ACACACACACAAACAAGGGGAACCGTCGCTTACACCGAAAAATGGTGCG 460 consensus_9441#3 ------------------------------------------------AAAAATGGTGCG 12 consensus_9441#2 GCTTCTGGC--GAGTTCCCGGAATCGGAACAAGTTGACCATTTGGTCCCATCNTTGTCCT 390 * * ** * consensus_9441#0 CCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGC-ATTTTACGATTTTTT 584 consensus_9441#1 CCGACCGATTGCCCACTGCCCCGTGTCGGTCATGGAAGACATGC-ATTTTACGATTTTTT 519 consensus_9441#3 CCAACCGATTGCCCGCTGTCCCGCGTCGGTCGTGGAAGACATGC-ATTTTACGATTTTTT 71 consensus_9441#2 CGTGTCGG--GCGTGATGCCGAGCCTCGGAACCAAGGTTCGCTCTGCTTCCTCACCGCCT 448 * ** ** ** * * **** * * ** * * consensus_9441#0 ATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATT 644 consensus_9441#1 ATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGGTCGAACATTACATT 579 consensus_9441#3 ATCACTACACTTTTTGCTCCGAGGGGGAGGTAGCTCTGCGTCCGGATCGAACATTACATT 131 consensus_9441#2 GTCACTACCGAGTCCGGC---AGCAGTTCGACAATCGACATCCTTGGCGATTTTGAAATC 505 ******* * * ** * * ** * *** *** * * ** consensus_9441#0 GTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCAC 704 consensus_9441#1 GTCCATTTTTCTC----------------------------------------------- 592 consensus_9441#3 GTCCATCTTTCTCGTGTCGGGCGTGATGCGAGCCTCGAACAGGGTCGGCTGCTTCCTCAC 191 consensus_9441#2 TTCTCCTTGTAATG---------------------------------------------- 519 ** * * consensus_9441#0 CGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTC 764 consensus_9441#1 ------------------------------------------------------------ consensus_9441#3 CGCCTGCACTACCGATCGGCGCAGTTCGACATCGACATCCTTGGCGATTTGAATCTTCTC 251 consensus_9441#2 ------------------------------------------------------------ consensus_9441#0 TTTAATTTGCTTCTCATCTTTAATAT--CTTTGTTCTT-GACGAACTCTT-CCCGGATGC 820 consensus_9441#1 CTTAATTTGCTTCTCATCTTTAATAT--CTTTGTTCTT-GACGAACTCTT-CCCGGATGC 648 consensus_9441#3 TTTAATTTGCTTCTCATCTTTAATAT--CTTTGTTCTT-GACGAACTCTT-CCCGGATGC 307 consensus_9441#2 -TTGGCTTTCTCATCTGTGTAAATATGCCTTTGTTCTTTGACGAACTCTTGCCCGGATGC 578 ** ** ** ** * ***** ********** *********** ********* consensus_9441#0 GTTG---CCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTAC 877 consensus_9441#1 GTTG---CCGTGCGGCGGTAATGGTACGAAAGTCTCCGGAGAACACCTCATTCTTGGTAC 705 consensus_9441#3 GTTG---CCGTGCGGCGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTAC 364 consensus_9441#2 GCTTTGCCCGTGCG-CGGAAATGGTACGAAAGTCACCGGAGAACACCTCATTCTTGGTAC 637 * * ******* *** *************** ************************* consensus_9441#0 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCC-TGAGAGAGCTCATAATTTGTGTT 936 consensus_9441#1 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCC-TGAGAGAGCTCATAATTTGTGTT 764 consensus_9441#3 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCC-TGAGAGAGCTCATAATTTGTGTT 423 consensus_9441#2 GCTGCAATATTTTGTACCAACGAAGGGCCTCACGCCCTGAGAGAGCTCATAATTTGTGTT 697 ************************************ *********************** consensus_9441#0 GCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGG-CCAGATATGTTTTAATTTTTTT 995 consensus_9441#1 GCCGGCAGCGGGAAAACCGATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACG 824 consensus_9441#3 GCCGGCGGCGGGAAAAC-GATCGTGTGCAGAGTATGGGCCAGATATGTTTTAATTTTACG 482 consensus_9441#2 GCCG-CGGCGGGAAAAC-GATCGTGTGCAGAGTATGGGCCAGATATGTTT-AATTATACC 754 **** * ********** ******************* ************ **** * consensus_9441#0 C--CAGTAGGC------------------------------------------------- 1004 consensus_9441#1 CAACAGCGGCAAAACCAATGTTTACGTTGCCGCTGTTAAGCAATCCATCGAAGCCCAGTA 884 consensus_9441#3 CAACAGCGG--------------------------------------------------- 491 consensus_9441#2 TGCTGGCTGATTCTGC-------------------------------------------- 770 * * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||