These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9469#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 994 fasta sequence [CTGTTGGCCTATTGGAATTCATTTCTTGTTTGTCATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT-TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA-GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT-GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG-AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG-ACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCTTCCGCCGCCTAGG-GT-AATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAAGCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAAGTCACTCCTTATCACTAAATTCTTTCAATAAAACACCATTAAAATCAGTAAAAAAAAAAAA] [-] EMBL CNS09JUU [CTGTTGGCCTATTGGAATTCATTTCTTGTTTGTCATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGAACTGAACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTAACGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGT AATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAAGCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAAGTCACTCCTTATCACTAAATTC ] [+] EMBL BM644612 [ TTTGTCATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGCGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATG ] [+] EMBL CNS092AK [ cctactggATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACTNTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGA ] [+] EMBL CNS09JUT [ TCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAA CGGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAA GGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGG GTAAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAAGCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAAGTCACTCCTTATCACTAAATTCTTTCAATAAAACACCATTAAAATCAGTAAAAAAAAAAAA] [+] EMBL BM629738 [ ccgCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCATGGGCGTGACGGA ] [+] EMBL BM582743 [ ccgCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAAGGAGGCGTACGAAATTTTCCGCATGGGCGTGACGGAGATCCACAAGCGTTTGATCCTGAATCTGCCCAACTTTAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCAGATTCGCTGAAGCAG ] [+] EMBL BM581826 [ ccGCATCCTCGGAACGCAAATTTGTTGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTATATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCTGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGACACGCTGAAGCAGGCTTCCGCCGCCTAGG CG AATGTAACG ] [+] EMBL BX628496 [ CTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCNTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGNGCTAAAGGATGATGAGGACAAGATCCTGAAGGNATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCACGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGNGCAACGGGTACGAACTGGGCCCNAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCG ] [+] EMBL BM598083 [ ccgGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTATATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGGAACGGGGTGAAGTATCTGGACGACATTACGCCGGACACGCTGAAGCAGGCTTCCGCCGCCTAGG CG AATGTAACGTAGAATCTAGCGTCTTGC ] [+] EMBL BM616919 [ ccgCTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTATATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGACACGCTGAAGCAGGCTTCCGCCGCCTAGGcgaa ] consensusID : consensus_9469#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 818 fasta sequence [GATCCCCGAGGTTGGCATCCTCGGAACGCGAATTTGTTGTAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGAAAACTTAAAAAAAAAAAAAAAAAAGGC] [+] EMBL AL931713 [GATCCCCGAGGTTGGCATCCTCGGAACGCGAATTTGTTGTAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGA ] [+] EMBL BX628771 [ gtaAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTANGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAANGATTTTTTTGTCATGCGTTCGGAATAAAGCCGA ] [+] EMBL BX608685 [ ACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGAT ] [-] EMBL CNS092AL [ GCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGAAAACTTAAAAAAAAAAAAAAAAAAGGC] [+] EMBL BX611517 [ GGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGCACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGG ] consensusID : consensus_9469#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 506 fasta sequence [GGGANGCTCGAGGCAGAATCCCNACGAGGTTGAGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTNAAGGATGATGAGGACAAGATCCTTGAAGGTGTCGGACAATCTGATGCTCGCTACCATGGGCGAAAGCCGGCGACCGTGTGCAGTTTCACCGAGTACATTAGCAAAAAACATTCTCCGTCTANCGAAATGCGGCAACGGGTACGAGACTGGGCCCGAAAGCGGCGGGACACGTTCACCCGGCGGCAATCTGGGCCGACTATCTGCGCTCCCGGACGCCGTACCATGTGAATCTAGCTGGTCNAGGCGGGTATGATGAGGTGGATGGTCCGNAGCNTGCGANCTACATCGACTATCTGGACGCAACTCGCTGGACGGGTNAAGANATGGG] [+] EMBL BX469595 [GGGANGCTCGAGGCAGAATCCCNACGAGGTTGAGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTNAAGGATGATGAGGACAAGATCCTTGAAGGTGTCGGACAATCTGATGCTCGCTACCATGGGCGAAAGCCGGCGACCGTGTGCAGTTTCACCGAGTACATTAGCAAAAAACATTCTCCGTCTANCGAAATGCGGCAACGGGTACGAGACTGGGCCCGAAAGCGGCGGGACACGTTCACCCGGCGGCAATCTGGGCCGACTATCTGCGCTCCCGGACGCCGTACCATGTGAATCTAGCTGGTCNAGGCGGGTATGATGAGGTGGATGGTCCGNAGCNTGCGANCTACATCGACTATCTGGACGCAACTCGCTGGACGGGTNAAGANATGGG] consensusID : consensus_9469#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 502 fasta sequence [CCGCCCACGCGTCCGCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGGCGCCCACGGGTACGGCGGCATG] [+] EMBL BM608486 [CCGCCCACGCGTCCGCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGGCGCCCACGGGTACGGCGGCATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9469#0 CTGTTGGCCTATTGGAATTCATTTCTTGTTTGTCATTCTGTCGGTTTCTTCGGCATC--- 57 consensus_9469#1 ---------------------------------GATCCCCGAGGTT-----GGCATC--- 19 consensus_9469#3 --------------------------------CCGCCCACGCGTCCGCTTCGGCATC--- 25 consensus_9469#2 -------------------------------GGGANGCTCGAGGCAGAATCCCNACGAGG 29 * * * consensus_9469#0 CTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTC 117 consensus_9469#1 CTCGGAACGCGAATTTGTTGTAA-CTTACTTTCCGCAACAATAATCGTACACATTTCGTC 78 consensus_9469#3 CTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCTACAATAATCGTACACATTTCGTC 85 consensus_9469#2 TTGAGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTC 89 * ******************* ************ *********************** consensus_9469#0 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 177 consensus_9469#1 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 138 consensus_9469#3 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 145 consensus_9469#2 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 149 ************************************************************ consensus_9469#0 GCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCT-GAAGGTA 236 consensus_9469#1 GCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCT-GAAGGTA 197 consensus_9469#3 GCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCT-GAAGGTA 204 consensus_9469#2 GCACTCACGCCCATTCCATCATGGTGCTNAAGGATGATGAGGACAAGATCCTTGAAGGTG 209 **************************** *********************** ****** consensus_9469#0 TCGGACAATCTGATGCTCGCTACCATGGGCGAA-GCCGGCGACCGTGTGCAGTT-CACCG 294 consensus_9469#1 TCGGACAATCTGATGCTCGCTACCATGGGCGAA-GCCGGCGACCGTGTGCAGTT-CACCG 255 consensus_9469#3 TCGGACAATCTGATGCTCGCTACCATGGGCGAA-GCCGGCGACCGTGTGCAGTT-CACCG 262 consensus_9469#2 TCGGACAATCTGATGCTCGCTACCATGGGCGAAAGCCGGCGACCGTGTGCAGTTTCACCG 269 ********************************* ******************** ***** consensus_9469#0 AGTACATCAGCAAAAA-CATTCTCC-TCTACCGAA-TGCG-CAACGGGTACGAG-CTGGG 349 consensus_9469#1 AGTACATCAGCAAAAA-CATTCTCC-TCTACCGAA-TGCG-CAACGGGTACGAA-CTGGG 310 consensus_9469#3 AGTACATCAGCAAAAA-CATTCTCC-TCTACCGAA-TGCG-CAACGGGTACGAG-CTGGG 317 consensus_9469#2 AGTACATTAGCAAAAAACATTCTCCGTCTANCGAAATGCGGCAACGGGTACGAGACTGGG 329 ******* ******** ******** **** **** **** ************ ***** consensus_9469#0 CCCGAAAGCGGCGGCACAC-TTCACCCGCCG-CAATCTGG-CCGACTATCTGCGCTCCCG 406 consensus_9469#1 CCCGAAAGCGGCGGCACAC-TTCACCCGCCG-CAATCTGG-CCGACTATCTGCGCTCCCG 367 consensus_9469#3 CCCGAAAGCGGCGGCACAC-TTCACCCGCCG-CAATCTGG-CCGACTATCTGCGCTCCCG 374 consensus_9469#2 CCCGAAAGCGGCGGGACACGTTCACCCGGCGGCAATCTGGGCCGACTATCTGCGCTCCCG 389 ************** **** ******** ** ******** ******************* consensus_9469#0 CACGCCGTACCATGTGAATCT-GCTGGTCG--GCGGGTATGATGAGGTGGATGGGCCGCA 463 consensus_9469#1 CACGCCGTACCATGTGAATCT-GCTGGTCG--GCGGGTATGATGAGGTGGATGGGCCGCA 424 consensus_9469#3 CACGCCGTACCATGTGAATCT-GCTGGTCG--GCGGGTATGATGAGGTGGATGGGCCGCA 431 consensus_9469#2 GACGCCGTACCATGTGAATCTAGCTGGTCNAGGCGGGTATGATGAGGTGGATGGTCCGNA 449 ******************** ******* ********************** *** * consensus_9469#0 GCT---GCACTACATCGACTATCTGGCC--AACTCGCTG--CCGGTGAAG-CATGG-CGC 514 consensus_9469#1 GCT---GCACTACATCGACTATCTGGCC--AACTCGCTG--CCGGTGAAG-CATGG-CGC 475 consensus_9469#3 GCT---GCACTACATCGACTATCTGGCC--AACTCGCTG--CCGGTGAAG-CATGGGCGC 483 consensus_9469#2 GCNTGCGANCTACATCGACTATCTGGACGCAACTCGCTGGACGGGTNAAGANATGGG--- 506 ** * ***************** * ********* * *** *** **** consensus_9469#0 CCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGAT 574 consensus_9469#1 CCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGAT 535 consensus_9469#3 CCACGGGTACGGCGGCATG----------------------------------------- 502 consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 CACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTT 634 consensus_9469#1 CACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTT 595 consensus_9469#3 ------------------------------------------------------------ consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 GATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGGACGGGGTGAAGTATCT 694 consensus_9469#1 GATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCT 655 consensus_9469#3 ------------------------------------------------------------ consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 GGACGACATTACGCCGGATTCGCTGAAGCAGGCTTCCGCCGCCTAGG-GTAATGTAACGT 753 consensus_9469#1 GGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGT 715 consensus_9469#3 ------------------------------------------------------------ consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 AGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAA 813 consensus_9469#1 AGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAA 775 consensus_9469#3 ------------------------------------------------------------ consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 TAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAA 873 consensus_9469#1 TAAAGCCGATCAATG-AAAACTTAAAAAAAAAAAAAAAAAAGGC---------------- 818 consensus_9469#3 ------------------------------------------------------------ consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 GCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAA 933 consensus_9469#1 ------------------------------------------------------------ consensus_9469#3 ------------------------------------------------------------ consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 GTCACTCCTTATCACTAAATTCTTTCAATAAAACACCATTAAAATCAGTAAAAAAAAAAA 993 consensus_9469#1 ------------------------------------------------------------ consensus_9469#3 ------------------------------------------------------------ consensus_9469#2 ------------------------------------------------------------ consensus_9469#0 A 994 consensus_9469#1 - consensus_9469#3 - consensus_9469#2 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||