These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1400 fasta sequence [GCAAGATTCGGCACGNTGGACAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGACGCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTAAGAATCGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGCGTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATA-CACGGAAAAAAAA] [+] EMBL BX467814 [GCAAGATTCGGCACGNTGGACAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTC ] [+] EMBL CNS09H5F [ AAG AGAGCA CAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGACGCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTAAGAATCGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTC ] [+] EMBL AGA284767 [ AAGAAGAGCACCAATTCGTCGCGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGG ] [+] EMBL CNS0978P [ AGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGACAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTTTACGAGCAATGATGTCTACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGACGCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGAAAAAAAAAACGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAA ] [-] EMBL CNS09H5G [ GCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTTTTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTAGAATCGTATGGCAGTCTTGTGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGCGTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATAGCACGG ] [-] EMBL CNS0978Q [ gaAGTTATAGTGTAAACATCAGCTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATG TGCACTTTTCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGCGATGTTTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATA CA ] [-] EMBL AGA283471 [ GATATGCCCAATGCAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTATATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGACACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACGGCAATTACCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATTGGGCTGCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAGCTGATAGAAGACGCGTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATA CACGGAAAAAAAA] [-] EMBL AGA280601 [ CGGAAGGAATCACTGTGTGGTGGAACGCCCCGACACATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACGGCAATTTCCGACAATTGCTGTAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTATAAGTGAGTGGGCTGCACGTGATGATAGGAAAGCATGGTTGGCATGACAAGTTTTGTAAATTTTAGTGCTCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACTCTAAGAATTAGGATTATGACAGGTGTACGCTTTACAAAGGAAAAACGCAATGTTATCGGTGAGTTAGCTGATAGAAGACGCGATGATTAAACAACCATGTGTGAAGGATACACAATGGACGTAGACTATAAGAATTGATA CACGGAAAAAAAA] consensusID : consensus_9471#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 831 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG-AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATATCTTTTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTANAATCGTATGGCAGTCTTGGTGCCCCTTGTATGAAAGT] [+] EMBL BM613938 [CCGCCCACGCGTCCGCCCACGCGTCCGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAAC ] [+] EMBL BM578028 [ ccgGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATATCTTTTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAA ] [+] EMBL BX604686 [ CGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATTGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACTGAcgcgc ] [+] EMBL BX625363 [ AGCCAGTGATNACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAG AAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTANGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATATCTTTTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATACTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTANAATCGTATGGCAGTCTTGGTGCCCCTTGTATGAAAGT] [+] EMBL BM649617 [ ccGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAGACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAAATCTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAACGAGCAATGATGTCTACGAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTAAACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGCATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCGGTAGAATAACTTTTGAATATTAGAAATCG ] consensusID : consensus_9471#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 697 fasta sequence [CCGGAACAGCGTTTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGGTAAGTCGGATTAAGTGTAAGGAACGCTGCGCGTTTCGACATGGATTCTTTAATTTATTGCTGTATATATGCATGCGGTATACGTTGTGTGTCGATATAGTAGTGGCTATCTTTTCTTACGCGAGAATCTCTATCACGGTCTGTGTGGGGATGGCGGGGGTACTGCGGGTGGATGAGTGGTACTGCTTATCCGCTGAAGCCAGCACGGAGACCGACACCAGCTTGGATTCCACCACCGAGCATTCCTTGCGAGCCAAAACCGGCTCCGATTCCGGCTCCAAATCCGACGCGCGAGCCTACGCCTCCATTAAATCCAGTTGGAAAACTCGATCCGGCACGCAGACCGCCGTTCAGTGCGCCACCGGCAGCTGCTTGCAGTCCTGCTCCAATACCTCCGAGTGCGTTACGCACTCCTCCCAG] [+] EMBL BM590288 [CCGGAACAGCGTTTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAAC ] [+] EMBL BM603696 [ ccGAACAGCG TTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGGTAAGTCGGATTAAGTGTAAGGAACGCTGCGCGTTTCGACATGGATTCTTTAATTTATTGCTGTATATATGCATGCGGTATACGTTGTGTGTCGATATAGTAGTGGCTATCTTTTCTTACGCGAGAATCTCTATCACGGTCTGTGTGGGGATGGCGGGGGTACTGCGGGTGGATGAGTGGTACTGCTTATCCGCTGAAGCCAGCACGGAGACCGACACCAGCTTGGATTCCACCACCGAGCATTCCTTGCGAGCCAAAACCGGCTCCGATTCCGGCTCCAAATCCGACGCGCGAGCCTACGCCTCCATTAAATCCAGTTGGAAAACTCGATCCGGCACGCAGACCGCCGTTCAGTGCGCCACCGGCAGCTGCTTGCAGTCCTGCTCCAATACCTCCGAGTGCGTTACGCACTCCTCCCAG] consensusID : consensus_9471#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence [CCGAGTAGCTGTGCGGAACGTTCTAGGACTTGGTGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATTCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAAC] [+] EMBL BM610313 [CCGAGTAGCTGTGCGGAACGTTCTAGGACTTGGTGGTGAACAGCGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAAAATCATCAAGGAAGCTATCGAAACGACGATCGGAGGTAATGCTTACCAGCATGATAAAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATCGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATTCGTGTCGGTGTTTGGACTTTCCATCTAAAGAAATCTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAAC] consensusID : consensus_9471#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence [AGCCAGAATCGCCACGACGGTCAGAACGTTCTAGGACTTGGTGGTGAACAACGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAAGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAAAATCATCAAGTAAGCTATCGAGACGACGATCGGAGCGTAATTGCTTACCAGCATGATAACAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATTGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCAGCTCGTGCTACTGGAATAACGAAACCGACGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATC] [+] EMBL AL696709 [AGCCAGAATCGCCACGACGGTCAGAACGTTCTAGGACTTGGTGGTGAACAACGTTTAGCGGCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCACCAAATCAGCATGGAAGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAAAATCATCAAGTAAGCTATCGAGACGACGATCGGAGCGTAATTGCTTACCAGCATGATAACAGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACAAAAGCCGTACAAATATATTGTAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGCATACGGCAGCTCGTGCTACTGGAATAACGAAACCGACGGTTCTTGCACAGTGCGCTGGGAGAACAAGACCATGTACTGCATCGTGTCGGTGTTTGGACTTTCCATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9471#0 ------------------------------------------------------------ consensus_9471#1 ----------------CCGCCCACGCGTCCGCCCACGCGTCCGGTGAACAGCGTTTAGCG 44 consensus_9471#3 --------CCGAGTAGCTGTGCGGAACGTTCTAGGACTTGGTGGTGAACAGCGTTTAGCG 52 consensus_9471#4 AGCCAGAATCGCCACGACGGTCAGAACGTTCTAGGACTTGGTGGTGAACAACGTTTAGCG 60 consensus_9471#2 ----------------------------------------CCGGAACAGCGTTTTTAGCG 20 consensus_9471#0 ------------------------------------GCAAGATTCGGCACGNTG-----G 19 consensus_9471#1 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 104 consensus_9471#3 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 112 consensus_9471#4 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 120 consensus_9471#2 GCAGATCGGCCTATTCAAAACAGCCAGTGATAACGTGCAAATTCCGCAACGATCCCATCA 80 **** * ** *** * consensus_9471#0 ACAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 79 consensus_9471#1 CCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 164 consensus_9471#3 CCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 172 consensus_9471#4 CCAAATCAGCATGGAAGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTAAGCAA 180 consensus_9471#2 CCAAATCAGCATGGAGGACGGCAAAGAAGAGCACCAATTCGTCGTGGACGATGTGAGCAA 140 ************** ************************************** ***** consensus_9471#0 AATCATCAAGGAAGCTATCGAGACGACGATCGGAG-GTAAT-GCTTACCAGCATGACAA- 136 consensus_9471#1 AATCATCAAGGAAGCTATCGAAACGACGATCGGAG-GTAAT-GCTTACCAGCATGATAA- 221 consensus_9471#3 AATCATCAAGGAAGCTATCGAAACGACGATCGGAG-GTAAT-GCTTACCAGCATGATAA- 229 consensus_9471#4 AATCATCAAGTAAGCTATCGAGACGACGATCGGAGCGTAATTGCTTACCAGCATGATAAC 240 consensus_9471#2 AATCATCAAGGAAGCTATCGAAACGACGATCGGAG-GTAAT-GCTTACCAGCATGATAA- 197 ********** ********** ************* ***** ************** ** consensus_9471#0 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 196 consensus_9471#1 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 281 consensus_9471#3 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 289 consensus_9471#4 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 300 consensus_9471#2 AGTTAACAACTGGACCGGATCGGTGGTGGAAAGCTGCCTCAGCGTGCTAACTAAGCTACA 257 ************************************************************ consensus_9471#0 AAAGCCGTACAAATATATCG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 255 consensus_9471#1 AAAGCCGTACAAATATATCG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 340 consensus_9471#3 AAAGCCGTACAAATATATCG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 348 consensus_9471#4 AAAGCCGTACAAATATATTG-TAACGTGCATGATAATGCAGAAAAATGGAGCTGGATTGC 359 consensus_9471#2 AAAGCCGTACAAATATATCGGTAAGTCGGATTA-AGTGTA-AGGAACGCTGCGCGTTTCG 315 ****************** * *** * ** * * ** * * ** * ** * ** consensus_9471#0 ATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGG 315 consensus_9471#1 ATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGG 400 consensus_9471#3 ATACGGCCAGCTCGTGCTACTGGAACAACGAAACCGATGGTTCTTGCACAGTGCGCTGGG 408 consensus_9471#4 ATACGGC-AGCTCGTGCTACTGGAATAACGAAACCGACGGTTCTTGCACAGTGCGCTGGG 418 consensus_9471#2 ACATGGATTCTTTAATTTATTGCTGTATATATGCATGCGGT--ATACGTTGTGTGTCGAT 373 * * ** * ** ** * * * *** * * *** * * consensus_9471#0 AGAACAA-GACCATGTACTGCAT-CGTGTCGGTGTTTGG-ACTTTCCATCTAAAGAAAAT 372 consensus_9471#1 AGAACAA-GACCATGTACTGCAT-CGTGTCGGTGTTTGG-ACTTTCCATCTAAAGAAA-T 456 consensus_9471#3 AGAACAA-GACCATGTACTGCATTCGTGTCGGTGTTTGG-ACTTTCCATCTAAAGAAA-T 465 consensus_9471#4 AGAACAA-GACCATGTACTGCAT-CGTGTCGGTGTTTGG-ACTTTCCATC---------- 465 consensus_9471#2 ATAGTAGTGGCTATCTTTT-CTTACGCGAGAATCTCTATCACGGTCTGTGTGGGGATGGC 432 * * * * * ** * * * * ** * * * * ** ** * consensus_9471#0 CTTTCGACTAAGGGTCATGCACAGGCACGCATTGGCGAGTGAA-CGAGCAATGATGTC-- 429 consensus_9471#1 CTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAA-CGAGCAATGATGTC-- 513 consensus_9471#3 CTTTCGACTAAGAGTCATGCACAGGCACGCATTGGCGAGTGAA-C--------------- 509 consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 GGGGGTACTGCGGGTGGATGAGTGGTACTGCTTATCCGCTGAAGCCAGCACGGAGACCGA 492 consensus_9471#0 TACTAATTTCCATAAAAAATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTA 489 consensus_9471#1 TACGAATTTCCATAAAACATACCGTCAATTTGGTTGATCTATAGCTGTATGAATGTTTTA 573 consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 CACCAGCTTGGATTCCACCACCGAGCATTCCTTGCGAGCCAAAACCGGCTC--CGATTCC 550 consensus_9471#0 AACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGGTTTCTTACAGAATTAGAC 549 consensus_9471#1 AACGTCGTATTTCTTTCCCGCATTCGGTTGCTGCGTATGGGTTTTCTTACAGAATTAGGC 633 consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 GGCTCCAAA--TCCGACGCGCGAGCCTACGCCTCCATTAAATCCAGTTGGAAAACTCGAT 608 consensus_9471#0 GCGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCTGCCGCTGGTGGATTAACTT 609 consensus_9471#1 ATGCGATGCTGTATGAATTTGCGTATCTTGTGCTTCTTTCGGCCG---GTAGAATATCTT 690 consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 CCGGCACGCAG-----ACCGCCGTTCAGTGCGCCACCGGCAGCTGCTTGCAGTCCTGCTC 663 consensus_9471#0 TTGAATGTTAGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATA 669 consensus_9471#1 TTGAATATTGGAAATCGCCTTAGCCTGTGAGCTGATTTAATTTATTTTTATTCGATAATA 750 consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 CAATACCTCCGAGTGCGTTACGCACTCCTCCCAG-------------------------- 697 consensus_9471#0 CTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTAAGAATCGTATGGCAGTCT 729 consensus_9471#1 CTATTACAATTAATAGGAACTATCTGTCCGCTGACAGCATTTANAATCGTATGGCAGTCT 810 consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TG-TGCCCCTTGTATGAAAGTTTTTCTCACCCTCAGCAGCAGTTATAGTGTAAACATCAG 788 consensus_9471#1 TGGTGCCCCTTGTATGAAAGT--------------------------------------- 831 consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 CTATTTTGGAAGAGAAAATTGTAGAAATAACAGGCTCGGCAGCCCACAATGTTGCACTTT 848 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TCCCTTTTAATAATCCTTTTGGTAGCCAGTTTTCGATAAAATAGTGTGATATGTCCAATG 908 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 CAAAAATTAAATTGCAATGTAAGCCATAGCAATTAGGATAGCACAGGGCCCTACCCTCTA 968 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TATCGTACGAGGCTGTGCAGCTGTCGGAAGGAAGCACTGTGTGGTGGAACGCTCCGAAAC 1028 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 ATGGAAGAAGAGAACAGTAGCAACTTATTGTGGTAGTACAGCAATTACCGACAATTGCTG 1088 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TAGCACAATTTAGCAAGAAACGACACACAACAGACACAATTCATCGCGCTGTAAGTGATT 1148 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 GGGCTCCACGTGATGATAGGAAAGCATGGTTGGCAATACAAGTTTTGTAAATTTTCGTGC 1208 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 TCACACAGCGAAACCGGAAGTAAGAAATGGGAGGAAACACTAAGAATTAGGATTATGACA 1268 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 GGTGTACGCTTTACAAAGGAAAAACGCATTGTTTTCGTTGAGTTAACTGATAGAAGACGC 1328 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 GTTGATTAAACAACCATGTGTGAAGGATACACAATAGACGTAGAATATAAGAATTGATAC 1388 consensus_9471#1 ------------------------------------------------------------ consensus_9471#3 ------------------------------------------------------------ consensus_9471#4 ------------------------------------------------------------ consensus_9471#2 ------------------------------------------------------------ consensus_9471#0 ACGGAAAAAAAA 1400 consensus_9471#1 ------------ consensus_9471#3 ------------ consensus_9471#4 ------------ consensus_9471#2 ------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||