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Anopheles gambiae
cluster # 9491 cluster # 9491       Sequences # 17       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9491#0 length = 1239 sequences # 14  
consensus_9491#1 length = 896 sequences # 3  

consensusID : consensus_9491#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1239
fasta sequence
                              [TGTTTTTCACTTTGCTTCTAGGAAGTTTGATAGTTTTTATTGTG-AAAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAA-G--TTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCTGGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCATCAATGTCATTTTCTTTAAACTCTAGTATCGAGGCGACGTTGCCACAGCGGTAGCAGTAGTTCGGTGCC-GACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCGTGTACTAGCTGATGCGCCCGGCAGATCATCTTCAGCATGTTGATCTCCATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCCCCGCGCGGACTCTCCGCCCACGTGTCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA-CTC--GTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTATCTCGGACACGGTGATATGGGGTAGCGAAATC-TGCGAAGAAACAACACAATGCGAGTCACCCCTTC-GCTCT-TCTGTGTGAACCCTCGTGGCCGAATCT]

[+] EMBL CNS09OKJ             [TGTTTTTCACTTTGCTTCTAGGAAGTTTGATAGTTTTTATTGTG AAAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAA G  TTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCTGGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCATCAATGTCATTTTCTTTAAACTCTAGTATCGAGGCGACGTTGCCACAGCGGTAGCAGTAGTTCGGTGCC GACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCGTGTACTAGCTGATGCGCCCGGCAGATCATCTTGAGCATGTTGATCTCCATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCCCCGCGCGGACTCTCCGCCCACGTGTCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTA CGTGCCTTTAGCGTAACAAAGCGCGTGAACGTTTCCAGACTGTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AGA284414            [           ttttTTTTAGGAAGTTTGATAGTTTTTATTGTGCAAAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAAGG  TTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCTGGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCATCAATGTCATTTTCTTTAAACTCTAGTATCGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL BM578370             [                                                                                                      AACAACGTAGCGCCGAA GGTTTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTAATGCGCTGGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCATCAATGTCATTTTCTTTAAACTCTAGTATCGAGGCGACATTGCCACAGCGGTAGCAGTAGTTCGGTGCC GACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATAACCTCATGTACTAGCTGATGCGCCCGGCAGATCATCTTCAGCATGTTGATCTCCATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCACCGCGCGGACTCTCCGCCCACGTATCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATAGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGCTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACTCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS096IR             [                                                                                                          ATGTAGCGCCGAA G  TTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCTGGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCATCAATGTCATTTTCTTTAAACTCTAGTATCGAGGCGACGTTGCCACAGCGGTAGCAGTAGTTCGGTGCC GACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCGTGTACTAGCTGATGCGCCCGGCAGATCATCTTGAGCATGTTGATCTCCATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCCCCGCGCGGACTCTCCGCCCACGTGTCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08LHZ             [                                                                                                          acGTAGCGCCGAA G  TTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTAATGCGCTGGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCATCAATGTCATTTTCTTTAAACTCTAGTATCGAGGCGACGTTGCCACAGCGGTAGCAGTAGTTCGGTGCC GACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCGTGTACTAGCTGATGCGCCCGGCAGAACATCTTCAGCATGTTGATCTCCATAAAGTCGCGCGTTACCGCCGACCCGAACAGCCAGCCGGCACCGCGCGGACTCTCCGCCCACGTTTCGATGTCGTCCGGATCCGACCAAACCAGAACACAAAATGTGCCCTTGTGCGGGATCTCCTGGTCACGGTTAATGGTTCGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL BX624831             [                                                                                                                                                                                                                                                                                                          AGTAGTTCGGTGCC GACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCATGTACTAGCTGATGCGCCCGGCAGATCATCTTCAGCATGTTGATCTCCATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCACCGCGCGGACTCTCCGCCCACGTATCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATAGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGCTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACTCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAG                                                                                                                              ]
[-] EMBL BX624630             [                                                                                                                                                                                                                                                                                                               TTCGGTGCCGGACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCATGTACTAGCTGATGCGCCCGGCAGATCATCTTCAGCATGTTGATCTCCATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCACCGCGCGGACTCTCCGCCCACGTATCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATAGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGCTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACTCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTGCC TTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTG                                                                                                                                        ]
[-] EMBL CNS096IQ             [                                                                                                                                                                                                                                                                                                                                              CGGTCGAACTGGTAGTTAATACCCTCGTGTACTAGCTGATGCGCCCGGCAGATCATCTTGAGCATGTTGATCTCCATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCCCCGCGCGGACTCTCCGCCCACGTGTCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCCCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCAT GCTCCGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTACCTCGGACACGGTGATATGGGGTAGCGAAATC TGCGAggg                                                            ]
[-] EMBL CNS09OKI             [                                                                                                                                                                                                                                                                                                                                                                                                                     CTCGATAAAGTCGCGCGTCACCGCCGACCCGAACAGCCAGCCGGCCCCGCGCGGACTCTCCGCCCACGTGTCGATGTCGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCCCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCAT GCTCCGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAATATTCGTGGTCGCTTTGTAGGATTTACCTCGGACACGGTGATATGGGGT                                                                              ]
[-] EMBL BX628991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTCCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCG  ATCTCCTGGTCACGGTTAATAGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGCTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACTCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTATCTCG                                                                                                ]
[-] EMBL BM618931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATAGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGCTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACTCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTATCTCGGACACGGTGATATGGGGTAGCGAAATCTTGCGcgg                                                             ]
[-] EMBL CNS08LHY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGAACTTGTTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTAC TCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGA CTC  GTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTACGGAACAACTCCTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTATCTCGGACACGGTGATATGGGGTAGCGAAATCTTGCGAAGAAA                                                          ]
[-] EMBL BX467367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTTGGCGCGACCTCCGGTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGACATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTATCTCGGACACGGTGATATGGGGTAGCGAAATCTTGCGAAGAAACAACACAATGCGAGTCACCCCTTCGGCTCT TCTGTGTGAACCCTCGTGGCCGAATCT]
[-] EMBL AL932434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCCAGACTGTAGTATCCCCGATCCACAAAGTCTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTATCTCGAACACGGTGATATGGGGTAGCGAAATCTTGCGAAGAAACAACACAATGCGAGTCACCCCTTC GCTCTCTCTcgggcgatc               ]


>consensus_9491#0 TGTTTTTCACTTTGCTTCTAGGAAGTTTGATAGTTTTTATTGTGAAAAATACGTTCAATA ACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAAGT TCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCT GGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCAT CAATGTCATTTTCTTTAAACTCTAGTATCGAGGCGACGTTGCCACAGCGGTAGCAGTAGT TCGGTGCCGACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCGTGTA CTAGCTGATGCGCCCGGCAGATCATCTTCAGCATGTTGATCTCCATAAAGTCGCGCGTCA CCGCCGACCCGAACAGCCAGCCGGCCCCGCGCGGACTCTCCGCCCACGTGTCGATGTCGT CCGGATCCGACCAAACCAGATCACAAAATGCGCCCTTGTGCGGTATCTCCTGGTCACGGT TAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAA GCACCTGTTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACCCTACAGCAATACT TCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGG TGATTTGGCGCGACTCGTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTGCCT TTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCTC CCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAAT CGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGT TCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCG GCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTC GGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTT ATCTCGGACACGGTGATATGGGGTAGCGAAATCTGCGAAGAAACAACACAATGCGAGTCA CCCCTTCGCTCTTCTGTGTGAACCCTCGTGGCCGAATCT



consensusID : consensus_9491#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 896
fasta sequence
                              [GGCCCCCGCAGCTCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTGCTTCTAGGAAGTTTGATAGTTTTTATTGTGCAAAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAAGGTTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTT-GGCGCGACTCGTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCCCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCCGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTACCTCGGACACGGTGATAT-GGGTAGCGAAATCAAGCGAAGACCAGTAGGCCAACAG]

[-] EMBL CNS093BD             [GGCCCCCGCAGCTCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTGCTTCTAGGAAGTTTGATAGTTTTTATTGTGCAAAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAAGGTTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTT GGCGCGACTCGTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCCCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCAT GCTCCGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTACCTCGGACACGGTGATAT GGGTAGCGAAATCAAGCGAAGA               ]
[+] EMBL CNS093BE             [                                           TTGCTTCTAGGAATTTTGATAGTTTTTATTGTGCAAAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAA GTTCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCCCTTGTGCGGTATCTCCTGGTCACGGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGGTGATTT GGCGCGACTCGTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCTTTAGCGTAA CAAGCGCGTTAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCCCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTTCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCCGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTTACCTCGGACACGGTGATATGGGGTAGCGAAATCTTGCGAAGACCAGTAGGCCAACAG]
[-] EMBL AGA285720            [                                                                                                                                                                                                                                                                                                                                                                                                                        CGTACACTTTGGTGATTTGGGCGCGACTCGTGGTTTCTTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCCCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCGGCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTCCGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATT                                                                              ]


>consensus_9491#1 GGCCCCCGCAGCTCGGGCACATGTGGCCTTTTTTTTTTTTTTTTTGCTTCTAGGAAGTTT GATAGTTTTTATTGTGCAAAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTG CGGCTCGGCATGAAAACAATGTAGCGCCGAAGGTTCCGGCCTGCATCCCGTCAGTAGCAT AGCTCGGTTCACAGGAAATAAGGCGTTATGCGCCCTTGTGCGGTATCTCCTGGTCACGGT TAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGCAAA GCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAATACT TCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTTTGG TGATTTGGCGCGACTCGTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTGCCT TTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGTCCC CCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCAAAT CGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTACGT TCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTTCCG GCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCATGGCTC CGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGATTT ACCTCGGACACGGTGATATGGGTAGCGAAATCAAGCGAAGACCAGTAGGCCAACAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9491#0      TGTTTTTCACTTTGCTTCTAGGAAGTTTGATAGTTTTTATTGTGAAAAATACGTTCAATA 60
consensus_9491#1      ------------------------------------------------------------
                                                                                  

consensus_9491#0      ACTGTAGAGCAGTAATGCGTCGATTTGCGGCTCGGCATGAAAACAATGTAGCGCCGAAGT 120
consensus_9491#1      ------------------------------------------------------------
                                                                                  

consensus_9491#0      TCCGGCCTGCATCCCGTCAGTAGCATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCT 180
consensus_9491#1      ------------------------------------------------------------
                                                                                  

consensus_9491#0      GGCTTGGTATGACGCGTTCTTCGTTCGGGACGGCTTTGAATATTTTCACCTTTGGATCAT 240
consensus_9491#1      ------------------------------------------------------------
                                                                                  

consensus_9491#0      CAATGTCATTTTCTTTAAACTCTAGTATCGAGGCGACGTTGCCACAGCGGTAGCAGTAGT 300
consensus_9491#1      ------------------------------------------------GGCCCCCGCAGC 12
                                                                      **   * * ** 

consensus_9491#0      TCGGTGCCGACCAGACCGTCACCAGCTTTCGGTCGAACTGGTAGTTAATACCCTCGTGTA 360
consensus_9491#1      TCGG-GCACATGTGGCCTTTTTTTTTTTTTTTTTG--CTTCTAGGAAGTTTGATAGTTT- 68
                      **** **  *   * ** *       ***   * *  **  ***  * *    * ** * 

consensus_9491#0      CTAGCTGATGCGCCCGGCAGATCATCTTCAGCATGTTGATCTCCATAAAGTCGCGCGTCA 420
consensus_9491#1      ----TTATTGTGCA----AAAATACGTTCAATAACTGTAGAGCAGTAATGCGTCGATTTG 120
                           *  ** **     * *  *  ****  *  *  *   *  *** *   **  *  

consensus_9491#0      CCGCCGACCCGAACAGCCAGCCGGCCCCGCGCGGACTCTCCGCCCACGTGTCGAT-GTCG 479
consensus_9491#1      CGGCTCGGCATGAAAACAATGTAGCGCCG---AAGGTTCCGGCCTGCATCCCGTCAGTAG 177
                      * **    *   * * * *    ** ***       *  * ***  * *  **   ** *

consensus_9491#0      TCCGGATCCGACCAAACCAGATCA--CAAAATGCGCCCTTGTGCGGTATCTCCTGGTCAC 537
consensus_9491#1      CATAGCTCGGTTCACAGGAAATAAGGCGTTATGCGCCCTTGTGCGGTATCTCCTGGTCAC 237
                          * ** *  ** *  * ** *  *   ******************************

consensus_9491#0      GGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGC 597
consensus_9491#1      GGTTAATGGTTCGAATTTGATCGAGCGTTTTGATTTCCGGACTAAGGCCACCGTGAACGC 297
                      ************************************************************

consensus_9491#0      AAAGCACCTGTTCTTCAATAATCGCGGCAATTGTTAGAAGGTCAAACACCCTACAGCAAT 657
consensus_9491#1      AAAGCACCTGTTCTTCAATAATCGCGGCAATTGTCAGAAGGTCAAACACCCTACAGCAAT 357
                      ********************************** *************************

consensus_9491#0      ACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTT 717
consensus_9491#1      ACTTCCACGGACTAGCGTTACCGTACTTCGTGTAACATTCATCGTAAAATCCGTACACTT 417
                      ************************************************************

consensus_9491#0      TGGTGATTTGGCGCGACTCGTGGTTTCCTCGCAGCAGCGTGATTTTGTTTGGGTACCGTG 777
consensus_9491#1      TGGTGATTTGGCGCGACTCGTGGTTTCCTCGCAGCAGCGTGATTTTGTTCGGGTACCGTG 477
                      ************************************************* **********

consensus_9491#0      CCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGT 837
consensus_9491#1      CCTTTAGCGTAAGCAAGCGCGTGAACGTTTCCAGACTGTAGTATCCCCGATCCACAAAGT 537
                      ************************************************************

consensus_9491#0      CTCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCA 897
consensus_9491#1      CCCCCATAAAGATGTAGTTCGTGTCCGGCACTTGGCCACCGGTGCGGAACAACTCTTCCA 597
                      * **********************************************************

consensus_9491#0      AATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTA 957
consensus_9491#1      AATCGTAAAACTGTCCATGGATATCGCCGCAAACGGTGACGGGTGTGCTGACGGGCTGTA 657
                      ************************************************************

consensus_9491#0      CGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTT 1017
consensus_9491#1      CGTTCGATTCCTCGATCAGCAGCTCGCAGACGATGTCGCACAGCTTCTTGAGATCATTTT 717
                      ************************************************************

consensus_9491#0      CCGGCAGGTACTTGCACTGCTTCACAATTTCGATCCACTGGTCCAGGTCCGAAGCCATGG 1077
consensus_9491#1      CCGGCAGGTACTTGCACTGCTTCACTATTTCGATCCACTGGTCCAGGTCCGAAGCCATGG 777
                      ************************* **********************************

consensus_9491#0      CTCGGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGA 1137
consensus_9491#1      CTCCGCGGGTACGCTGCTGGCAGGGAGTGGGGGTGGAAGATTCGTGGTCGCTTTGTAGGA 837
                      *** ********************************************************

consensus_9491#0      TTTATCTCGGACACGGTGATATGGGGTAGCGAAATCTGCGAAGAAACAACACAATGCGAG 1197
consensus_9491#1      TTTACCTCGGACACGGTGATATGGG-TAGCGAAATCAAGCGAAGACCAGTAGGCCAACAG 896
                      **** ******************** **********     *  * **  *       **

consensus_9491#0      TCACCCCTTCGCTCTTCTGTGTGAACCCTCGTGGCCGAATCT 1239
consensus_9491#1      ------------------------------------------
                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)