These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_95#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 643 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAAAGGTGTGAAAAGTAATGGCAAAAAAGGGTAAAGAACTGCAAAGCGCCGGAGCAGTAAGTTTAAACTAATATGTAAAGTAATAAACGCTACCGACAAACATTAACGCAACCTCATCGCATACATCCCATTCACTAGCAACATTCAATTTCTTTTTCCCAAACACTCACACACACATGCAGAAAGTGTTAAAGAATGGGAGTAATACAGACAAAAAAAAAACCATAAAAAGAAAAATGGCCGCAAATCTTTAATATACAACACACACACCCACACACATACAAACATATTAACTTAGTATTTGAATAATGATTACGAGACCAAGAAAAAGCCAGTGGGGGAGGTATCCAAAAAAGAAAGGACGAAAGAATGAAAGAGTAAAAATAAATTAATTAAGTTTTCGCTTATTGCTTGTAAGAATTAAAAAGTACGTAATAATCGAATTGCAAACAGATGATAATGGGAAAAAAGAAAAGAAAAGCTACGAGCAAAAGAGATAGAGAAAAATCGACAAAGGAAACAGTTAAACAGTTGATAAAGGAAAGAAAGAAACAAACAAACCCACAAACTGAAAATCAAGGATAAAAAAACTGAAATGAAAGAGG] [+] EMBL BM648192 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAAAGGTGTGAAAAGTAATGGCAAAAAAGGGTAAAGAACTGCAAAGCGCCGGAGCAGTAAGTTTAAACTAATATGTAAAGTAATAAACGCTACCGACAAACATTAACGCAACCTCATCGCATACATCCCATTCACTAGCAACATTCAATTTCTTTTTCCCAAACACTCACACACACATGCAGAAAGTGTTAAAGAATGGGAGTAATACAGACAAAAAAAAAACCATAAAAAGAAAAATGGCCGCAAATCTTTAATATACAACACACACACCCACACACATACAAACATATTAACTTAGTATTTGAATAATGATTACGAGACCAAGAAAAAGCCAGTGGGGGAGGTATCCAAAAAAGAAAGGACGAAAGAATGAAAGAGTAAAAATAAATTAATTAAGTTTTCGCTTATTGCTTGTAAGAATTAAAAAGTACGTAATAATCGAATTGCAAACAGATGATAATGGGAAAAAAGAAAAGAAAAGCTACGAGCAAAAGAGATAGAGAAAAATCGACAAAGGAAACAGTTAAACAGTTGATAAAGGAAAGAAAGAAACAAACAAACCCACAAACTGAAAATCAAGGATAAAAAAACTGAAATGAAAGAGG] consensusID : consensus_95#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 554 fasta sequence [CCGCGGACGCGTGGGTGAAGTCGTTCGGCGATGCGGAGGTCAGTGGCGAAGAGCTGCACGACATTCTCAAGGAAATCGACACCAACATGAACGGACAGGTCGAGCTGGAGGAGTACCTACAGATGATGTCGGCAATCAAGTCCGGATTTGTATCGCACTCTCGGTTTGCTGCGGTGGCGGAACAGGAAGAAATCCGCAAGGAGCAGGAACGTCTCAAGAAGCAGATCACCATCGAGCGATCTGGAGGTGGCTTATAAGCGCCCGGGCAGGATTATCCGGCCAGGTGGCCCCAATCGATTGGCTTGTCGACGATGCACAATCTTCGCGCCAGTCGATGTGCACCAGCGGGCACCTTGGCTTTGACAAACCTGCCGGCGTTCCTCTTATCCAGCTAAGTGCTGTACCACGAACACGGCTGTTATTTGTGACAATGGATAAATTATGGTTGCTTGCATAACACCCAGGATGACCTTCGCTCCTCTCCAACGCGATAAAATACCTTACTCATCGGCAGTTCCCACGTGCTCCCTGTTGGTTGGAGAATTGATGTTAAG] [+] EMBL BM642477 [CCGCGGACGCGTGGGTGAAGTCGTTCGGCGATGCGGAGGTCAGTGGCGAAGAGCTGCACGACATTCTCAAGGAAATCGACACCAACATGAACGGACAGGTCGAGCTGGAGGAGTACCTACAGATGATGTCGGCAATCAAGTCCGGATTTGTATCGCACTCTCGGTTTGCTGCGGTGGCGGAACAGGAAGAAATCCGCAAGGAGCAGGAACGTCTCAAGAAGCAGATCACCATCGAGCGATCTGGAGGTGGCTTATAAGCGCCCGGGCAGGATTATCCGGCCAGGTGGCCCCAATCGATTGGCTTGTCGACGATGCACAATCTTCGCGCCAGTCGATGTGCACCAGCGGGCACCTTGGCTTTGACAAACCTGCCGGCGTTCCTCTTATCCAGCTAAGTGCTGTACCACGAACACGGCTGTTATTTGTGACAATGGATAAATTATGGTTGCTTGCATAACACCCAGGATGACCTTCGCTCCTCTCCAACGCGATAAAATACCTTACTCATCGGCAGTTCCCACGTGCTCCCTGTTGGTTGGAGAATTGATGTTAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_95#0 CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGAAAGGTGTGAAAAGTAATGGC 60 consensus_95#1 ------------CCGCGGACGCGTGGGTGAAGTCGTTCGGC-GATGCGGAGGTCAGTGGC 47 ************* * * *** * * ** * * * **** consensus_95#0 AAAAAAGGGTAAAGAACTGCAAAGCGCCGGAGCAGTAAGTTTAAACTAATATGTAAAGTA 120 consensus_95#1 GAAGAGCTGCACGACATTCTCAAGGAAATCGACACCAA-CATGAACGGACAGGTCGAGCT 106 ** * * * * * *** ** ** * *** * * ** ** consensus_95#0 ATAAACGCTACCGACAAACATTAACGCAACCTCATCGCATACATCCCATTCACTAGCAAC 180 consensus_95#1 GGAGGAG-TACCTACAGATG--------ATGTCGGCAATCAAGTCCGGATTTGTATCG-- 155 * * **** *** * * ** * * *** * ** * consensus_95#0 ATTCAATTTCTTTTTCCCAAACACTCACACACACATGCAGAAAGTGTTAAAGAATGGGAG 240 consensus_95#1 ---CACTCTCGGTTTGCT--GCGGTGGCGGA-ACAGGAAGAAATCCGCAAGGAGCAGGAA 209 ** * ** *** * * * * * *** * ***** ** ** *** consensus_95#0 TAATACAGACAAAAAAAAAACCATAAAAAGA----AAAATGGCCGCAAATCTTTAATATA 296 consensus_95#1 CGTCTCA-AGAAGCAGATCACCATCGAGCGATCTGGAGGTGGCTTATAAGCGCCCGGGCA 268 ** * ** * * ***** * ** * **** ** * * consensus_95#0 CAACACACACACCCACACACATACAAACATATTAACTTAGTATT--TGAATAATGATTAC 354 consensus_95#1 GGAT-TATCCGGCCAGGTGGCCCCAATCG-ATTGGCTTGTCGACGATGCACAATCTTCGC 326 * * * *** *** * *** *** ** * *** * * consensus_95#0 GAGACCAAGAAAAAGCCAGTGGGGGAGGTATCCAAAAAAGAAAGGACGAAAGAATGAAAG 414 consensus_95#1 GCCAGTCGATGTGCACCAGCGGGCACCTTGGCTTTGACAAACCTGCCGGCGTTCCTCTTA 386 * * **** *** * * * * * * ** consensus_95#0 AGTAAAAATAAATTA-ATTAAGTTTTCGCTTATTGCTTGTAAGAATTAAAAAGTACGTAA 473 consensus_95#1 TCCAGCTAAGTGCTGTACCACGAACACGGCTGTTATTTGTGACAATGGATAAATTATGGT 446 * * * * * * ** * ** **** * *** * ** * consensus_95#0 TAATCGAATTGCAAACAGATGATAATGGGAAAAAAGAAAAGAAAAGCTACGAGCAAAAGA 533 consensus_95#1 TGCTTGCATAACACCCAG-----------------GATGACCTTCGCTCCTCTCCAACGC 489 * * * ** ** *** ** * *** * * ** * consensus_95#0 GATAGAGAAAAATCGACAAAGGAAACAGTTAAACAGTTGATAAAGGAAAGAAAGAAACAA 593 consensus_95#1 GATAAAATACCTTACTCATCGGCAGTTCCCACGTGCTCCCTGTTGGTTGGAGAATTGATG 549 **** * * * ** ** * * * * ** ** * consensus_95#0 ACAAACCCACAAACTGAAAATCAAGGATAAAAAAACTGAAATGAAAGAGG 643 consensus_95#1 TTAAG--------------------------------------------- 554 ** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||