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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9507#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1756 fasta sequence
[TGTAGACGAAAATACATGTTTTCTTACGAAAAAAAAATATCTTCAACTAGGTAGTTCTGGAGTATGGATAGACGACGGATGGATAAAATACATTACTTATACGCAATGAGTCTTTCTCTGTATGTGTAGTCGAATACATGCCAGGCCAGGCCATTCTATGAGGTTTGCAGCATTGAACACATTCTACATTTTAACTGATTTTTCGCAAACTCTACACCGCACCTGTTCTCCTGCCCTGTCTAAACCTGCCCGCACTTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTCTCTGTAAACGTATATGCTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAGCGCTTACTTCGCTACTTCCTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTGCCGGA-CGT-CGC-CGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC-TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG-----G-GTCCACC-CCAGC-G-TTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAACTCGTGCTTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACACACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC-TCCC-GGC-GATTG-A-TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC-GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGCGGGCGG]
[+] EMBL CNS08ZT1 [TGTAGACGAAAATACATGTTTTCTTACGAAAAAAAAATATCTTCAACTAGGTAGTTCTGGAGTATGGATAGACGACGGATGGATAAAATACATTACTTATACGCAATGAGTCTTTCTCTGTATGTGTAGTCGAATACATGCCAGGCCAGGCCATTCTATGAGGTTTGCAGCATTGAACACATTCTACATTTTAACTGATTTTTCGCAAACTCTACACCGCACCTGTTCTCCTGCCCTGTCTAAACCTGCCCGCACTTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTCTCTGTAAACGTATATGCTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAGCGCTTACTTCGCTACTTCCTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTGCCGGA CGT CGC CGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCGTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGA ]
[-] EMBL BM582297 [ GTTTCTGTAAACGTATATGCTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAGCGCTTACTTCGCTACTTCCTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACTCCACTCCCAGA CGT CGC CGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG G GTCCACCTCCAGCTGCTTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCgg ]
[-] EMBL CNS08ZT0 [ CGGAGCGTGCGCGCGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG G GTCCACCTCCAGC G TTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAACTCGTGCTTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATTTCCTCACACACGAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGggggg ]
[-] EMBL BM575517 [ GCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTGTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG G GTCCACCTCCAGCTGCTTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAGCTCGTGCTTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACACACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACcgg ]
[-] EMBL BM592369 [ GATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCGCCCACGCGTCCGCC CACGC G TCCGCgg ]
[-] EMBL BM615555 [ AGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACACACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATGAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCGAAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTTAACCGCTAGCCGCcgg ]
[-] EMBL BM625478 [ AGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGg ]
[-] EMBL BM626826 [ GGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGTGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGcgg ]
[-] EMBL BM606549 [ CGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCCGGGCGGATTG A TTTGACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCG TCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACcgg ]
[-] EMBL BM656147 [ TACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGCGG ]
[-] EMBL BM609582 [ TGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCAGTCAGCTCCTCC TCCC GGC GATTG ATTTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCGAAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTTAACCGCTAGCCGCTTGGAATGAGCGCTTTTTCACgg ]
[-] EMBL BM595923 [ TTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCCTTCCC GGCGGATTGAA TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAcgg ]
[-] EMBL BM580898 [ TGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCG TCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCGAAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTTAACCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGTTTGCGG]
consensusID : consensus_9507#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 818 fasta sequence
[TAGGTNGTTCTGGAGTATGATNGCCGCGGANGGATGGAAGACNNTTATTTGTGAGCCAGTGANTCTTGCNCTGGTATTGTGTGGTCGGAATACAGGCCCNAGCTCAGGCCAGTTGCNATGAGGTTGNCCGCAGTNTGAACACAGTGCGACAATTTTTGAACTGGATTNTTTCCGCATNNACCGCTTACANCGCACCCTGGTTTCTTCCTGGTGCCCTGTGTAAACNCTGCCCGCACGTGTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCGTGCCCTAGNACTTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTGTTCGTGTAAACGTATATGCTACATGGCGCACTGTGGACCGAGTGTTTCGTTACCGCCAGAGAATGACTCACAGCGCTTACTTCGNCTACCTTCCCGTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTNTGGGCTTCGCCNTCCAACGTACACCGGCTCCTCCTCTGCATCATCTCCACCNTCAGCCGCGACCACTCCACTCCCAGACGTCGCCGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCAGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTNCAGCTTCTNCTGGCCCGCTTGCAGATGCTAACCTCGGGGA]
[-] EMBL AL694564 [TAGGTNGTTCTGGAGTATGATNGCCGCGGANGGATGGAAGACNNTTATTTGTGAGCCAGTGANTCTTGCNCTGGTATTGTGTGGTCGGAATACAGGCCCNAGCTCAGGCCAGTTGCNATGAGGTTGNCCGCAGTNTGAACACAGTGCGACAATTTTTGAACTGGATTNTTTCCGCATNNACCGCTTACANCGCACCCTGGTTTCTTCCTGGTGCCCTGTGTAAACNCTGCCCGCACGTGTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCGTGCCCTAGNACTTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTGTTCGTGTAAACGTATATGCTACATGGCGCACTGTGGACCGAGTGTTTCGTTACCGCCAGAGAATGACTCACAGCGCTTACTTCGNCTACCTTCCCGTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTNTGGGCTTCGCCNTCCAACGTACACCGGCTCCTCCTCTGCATCATCTCCACCNTCAGCCGCGACCACTCCACTCCCAGACGTCGCCGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCAGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTNCAGCTTCTNCTGGCCCGCTTGCAGATGCTAACCTCGGGGA]
consensusID : consensus_9507#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence
[TTCGCAAACTCTACACCGGCATCTGTTCTCCTGCCCTGTCTAAACCTGTCCGCACTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTTTCTGTAAACGTATATACTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAACGCTTGCTTCGCCACCTCCTGCTCCTTACTATCACCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTTCCCAGACGTCGCCGCATGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGCGG]
[-] EMBL BM621982 [TTCGCAAACTCTACACCGGCATCTGTTCTCCTGCCCTGTCTAAACCTGTCCGCACTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTTTCTGTAAACGTATATACTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAACGCTTGCTTCGCCACCTCCTGCTCCTTACTATCACCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTTCCCAGACGTCGCCGCATGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGCGG]
[-] EMBL BM654716 [ GCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCcgg ]
consensusID : consensus_9507#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 598 fasta sequence
[CCGGGGTAAGAGCACACAGCGGCATAAAGATGGTTGATTACAGCAAATGGAAAGATATTGAGATCTCGGATGATAAGGAGATGAAGGAAGAAGAAAAAGCTAAGAAGACTAAAGATGAAGAAGAAGCCAAGAAGATGAAAGAAGATGCTGAAGTCAGCAATAAGAAATCAGATAAGGAATATAAGAAAAAGATAGATGAAACAGAAACTGAGAAAAAGGTAGAAGAAAGTAACAAAAAGAAAGAAGAGAAAGAGGCCATTCAGAATAAGAAAGAAGAAGAAGCTATACAGATTAAGCTTGATGAAGAAAAGAAGGAAGCAGAAGAAATCAATAAGAATCAGAAAGAGGAAGAAGCCAAGAAAAAGCAGAGAGAGCAAGAAGCCAAGAAGAAGAAGGAGGAGGAAGATTCCAAGAAGAAGAAGGAAGAGGAAGAAGCTAGAAAAGAGAAAGAAGAGGAAGAAGTTAAGAAGAAGAATGCTGAAGAAAAGGCTAAGAAGAAGAAGGAAGAGGAAGAGGCCAAGAAGAAGCAGGATGAGGAAGCTGCCAAGAAAAAGAAAGAAGAGGTAGAAGCCAAGAAGCAGAAGGAAGAGGAAGAAGC]
[+] EMBL BM655906 [CCGGGGTAAGAGCACACAGCGGCATAAAGATGGTTGATTACAGCAAATGGAAAGATATTGAGATCTCGGATGATAAGGAGATGAAGGAAGAAGAAAAAGCTAAGAAGACTAAAGATGAAGAAGAAGCCAAGAAGATGAAAGAAGATGCTGAAGTCAGCAATAAGAAATCAGATAAGGAATATAAGAAAAAGATAGATGAAACAGAAACTGAGAAAAAGGTAGAAGAAAGTAACAAAAAGAAAGAAGAGAAAGAGGCCATTCAGAATAAGAAAGAAGAAGAAGCTATACAGATTAAGCTTGATGAAGAAAAGAAGGAAGCAGAAGAAATCAATAAGAATCAGAAAGAGGAAGAAGCCAAGAAAAAGCAGAGAGAGCAAGAAGCCAAGAAGAAGAAGGAGGAGGAAGATTCCAAGAAGAAGAAGGAAGAGGAAGAAGCTAGAAAAGAGAAAGAAGAGGAAGAAGTTAAGAAGAAGAATGCTGAAGAAAAGGCTAAGAAGAAGAAGGAAGAGGAAGAGGCCAAGAAGAAGCAGGATGAGGAAGCTGCCAAGAAAAAGAAAGAAGAGGTAGAAGCCAAGAAGCAGAAGGAAGAGGAAGAAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9507#0 TGTAGACGAAAATACATGTTTTCTTACGAAAAAAAAATATCTTCAACTAGGTAGTTCTGG 60
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 -------------------------------TAGGTNGTTCTGGAGTATGATNGCCGCGG 29
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 AGTATGGATAGACGACGGATGGATAAAATACATTACTTATACGCAATGAGTCTTTCTCTG 120
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ANGGATGGAAGACNNTTATTTGTGAGCCAGTGANTCTTGCNC-TGGTATTGTGTGGTCGG 88
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 TATGTGTAGTCGAATACATGCCAG--GCCAGGCCATTCTATGAGGTTTGCA-GCATTGAA 177
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 AATACAGGCCCNAGCTCAGGCCAGTTGCNATGAGGTTGNCCGCAGTNTGAACACAGTGCG 148
consensus_9507#3 ---------------------------------------CCGGGGTAAGAGCACACAGCG 21
consensus_9507#0 CACATTCTACATTTTAACTGATTTTTCGCAAACT--CTACACCG-CACCTGTTCTCCT-- 232
consensus_9507#2 ------------------------TTCGCAAACT--CTACACCGGCATCTGTTCTCCT-- 32
consensus_9507#1 ACAATTTTTGAACTGGATTNTTTCCGCATNNACCGCTTACANCGCACCCTGGTTTCTTCC 208
consensus_9507#3 GCA----TAAAGATGGTTGATTACAGCAAATGGAA-AGATATTGAGATCTCGGATGATAA 76
* * * * ** * *
consensus_9507#0 ----GCCCTGTCTAAACC-TGCCCGCACTTG--CGTAGTTGGCCTTGCGTAGAGCTGCTG 285
consensus_9507#2 ----GCCCTGTCTAAACC-TGTCCGCACTTG--CG--------------TAGAGCTGCTG 71
consensus_9507#1 TGGTGCCCTGTGTAAACNCTGCCCGCACGTGTGCGTAGTTGGCCTTGCGTAGAGCTGCTG 268
consensus_9507#3 GGAGATGAAGGAAGAAGAAAAAGCTAAGAAGACTAAAGATGAA-----GAAGAAGCCAAG 131
* ** * * * *** *
consensus_9507#0 C-TGCC-TAGAACTTT-GCAGAGAAGCGTTGGGAAAGGATGTTTTGTCTC--TGTAAACG 340
consensus_9507#2 C-TGCC-TAGAACTTT-GCAGAGAAGCGTTGGGAAAGGATGTTTTGTTTC--TGTAAACG 126
consensus_9507#1 CGTGCCCTAGNACTTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTGTTCGTGTAAACG 328
consensus_9507#3 AAGATGAAAGAAGATGCTGAAGTCAGCAATAAGAAATCAGATAAGGAATATAAGAAAAAG 191
** * * * *** * **** * * * * * *** *
consensus_9507#0 TATATGCTACATGGCGCACTGTG-ACCGAGTGTTC----TTACCGC-AGAGAATGACTCA 394
consensus_9507#2 TATATACTACATGGCGCACTGTG-ACCGAGTGTTC----TTACCGC-AGAGAATGACTCA 180
consensus_9507#1 TATATGCTACATGGCGCACTGTGGACCGAGTGTTTCG--TTACCGCCAGAGAATGACTCA 386
consensus_9507#3 -ATAGATGAAACAGAA-ACTGAGAAAAAGGTAGAAGAAAGTAACAAAAAGAAAGAAGAGA 249
*** * * * **** * * ** ** * * ** * *
consensus_9507#0 CAGCGCTTACTTCGCT-ACTTCC---TGCTCCTTACTATCGCCTTCCGCTTGCGCATCTT 450
consensus_9507#2 CAACGCTTGCTTCGCC-ACCTCC---TGCTCCTTACTATCACCTTCCGCTTGCGCATCTT 236
consensus_9507#1 CAGCGCTTACTTCGNCTACCTTCCCGTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTT 446
consensus_9507#3 AAGAGGCCATTCAGAATAAGAAA-------GAAGAAGAAGCTATACAGATTAAGCTTGAT 302
* * * * * * * * * * ** ** * *
consensus_9507#0 CACTCTT-GGGCTTCGCCTCC--ACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCT 507
consensus_9507#2 CACTCTT-GGGCTTCGCCTCC--ACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCT 293
consensus_9507#1 CACTCTNTGGGCTTCGCCNTCCAACGTACACCGGCTCCTCCTCTGCATCATCTCCACCNT 506
consensus_9507#3 GAAGAAAAGAAGGAAGCAGAAGAAATCAATAAGAATCAGAAAGAGGAAGAAGCCAAGAAA 362
* * ** * * * ** * * * * *
consensus_9507#0 CAGCCGCGACCACCCCACTGCC-GGACGTCGCCGCA-GCGGCACTCTTTGCATCCGGCAC 565
consensus_9507#2 CAGCCGCGACCACCCCACTTCCCAGACGTCGCCGCATGCGGCACTCTTTGCATCCGGCAC 353
consensus_9507#1 CAGCCGCGACCACTCCACTCCC-AGACGTCGCCGCA-GCGGCACTCTTTGCATCCGGCAC 564
consensus_9507#3 AAGCAGAGAGAGCAAGAA-GCCAAGAAGAAGAAGGAGGAGGAAGATTCCAAGAAGAAGAA 421
*** * ** * * ** ** * * * * * ** * * *
consensus_9507#0 CCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTT 625
consensus_9507#2 CCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTT 413
consensus_9507#1 CCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTT 624
consensus_9507#3 GGAAGAGGAAGAAGCTA-GAAAAGAGAAAGAAGAGGAAGAAGTTAAGAAGAAGAATGCTG 480
* ** ** * * * * * *** * * ** * * * *
consensus_9507#0 G-GCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCT 684
consensus_9507#2 G-GCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCT 472
consensus_9507#1 G-GCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCT 683
consensus_9507#3 AAGAAAAGGCTAAGAAGAAGAAGGAAGAGGAAGAGGCCAAGAAGAAGCAGGATGAGGAAG 540
* * *** * * * * * * **** *
consensus_9507#0 CGGGCAGCGATTCGAACACCTCGACC-GGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTG 743
consensus_9507#2 CGGGCAGCGATTCGAACACCTCGACC-GGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTG 531
consensus_9507#1 CGGGCAGCGATTCAAACACCTCGACCAGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTG 743
consensus_9507#3 CTGCCAAGAAAAAGAAAGAAGAGGTAGAAGCCAAG---AAGCAGAAGGAAGAGGAAGAAG 597
* * ** * ** * * * ** * * ** ** *
consensus_9507#0 CGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGG 803
consensus_9507#2 CGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGG 591
consensus_9507#1 CGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTNCAGCTTCTNCTGG-CCCGCTTGCAG 802
consensus_9507#3 C----------------------------------------------------------- 598
*
consensus_9507#0 ATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCC 863
consensus_9507#2 ATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCC 651
consensus_9507#1 ATGCTAACCTCGGGGA-------------------------------------------- 818
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 TCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCGGGTCCACCCCAGCGTTCGCA 923
consensus_9507#2 TCCTGGATGCGCTGGAAGCGG--------------------------------------- 672
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 ATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAACTCGTGC 983
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 TTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACAC 1043
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 ACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCG 1103
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 AACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGC 1163
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 TCCTCGGTCAGCTCCTCCTCCCGGCGATTGATTGCACTCTTGTTGATGACCGTCTTGGCG 1223
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 AAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGC 1283
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 TCTTCCTCCTCCTGCCGCACGCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTC 1343
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 AGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCC 1403
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 GCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGC 1463
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 TCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTG 1523
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 TCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATG 1583
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 CCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGT 1643
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 GACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGG 1703
consensus_9507#2 ------------------------------------------------------------
consensus_9507#1 ------------------------------------------------------------
consensus_9507#3 ------------------------------------------------------------
consensus_9507#0 AATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGCGGGCGG 1756
consensus_9507#2 -----------------------------------------------------
consensus_9507#1 -----------------------------------------------------
consensus_9507#3 -----------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||