cluster # 9516

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Anopheles gambiae
cluster # 9516 cluster # 9516 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9516#0 length = 1565 sequences # 16

consensus_9516#1 length = 483 sequences # 1

consensusID : consensus_9516#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1565
fasta sequence

                              [TACTCGCCTCCGCCGTGTAGCAGTCAAACAAAACAAAGCTAGCATTTATATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTACGACGATCTGGACACGAAGCAT---GGGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG--TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG-CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG-AACGAGTACGACAAACT-GGTGAAGGACCGG-AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC-GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG-ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAA-TCTAAATAAGCTAGCATAAATATAACATCCTTTCCC]

[+] EMBL CNS08EDF             [TACTCGCCTCCGCCGTGTAGCAGTCAAACAAAACAAAGCTAGCATTTATATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTACGACGATCTGGACACGAAGCAT   GGGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGCCTGGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGGAAAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGGGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08FLO             [      CCTCCGCCGTGTAGCAGTCACACAAAACAAAGCTAGCATTTATATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTACGACGATCTGGACACGAAGCATTGCGCGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG  TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGAC CCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM585211             [                            ccgAACAAAGCTAGCATTTGTATCGATTTTTACACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTTTACGACGATCTCGATACGAAGCAT   GGGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG  TTGTGCTTAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAGCT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAACAGCAACAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS09CAM             [                                                                                                                                                  GGGCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG  TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09R07             [                                                                                                                                                     CCGA AAGGTGG CGGGTGGTCGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAGTTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG  TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCGCAACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09C2J             [                                                                                                                                                                          CGTCCGGATTGAAACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCG  TTGTGCTGAAGGCGAAAAAAGAACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACTCACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACTGGGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM597162             [                                                                                                                                                                                                                                                                       ccgAGATTCTTACACCCG  TTGTGCTGAAGGCGAAAAAAGAACCAACCGAACAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGAGCGACCACATCACTCATTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGACCACGAATGCAACG CCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAACAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCCAAGAAGTTCAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS093K3             [                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCAACGCCCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGGCCG AACGAGTACGACAAACT GGTGAAGGACCGG AAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS08EDG             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCGGTGGTATGCGCAACAGTAACAACAACAAAAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGGGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAAGTCTAAATAAGCTAGCATAAATATAACATCCTTTCCC]
[+] EMBL CNS09I83             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTATGCGCAACAATAACAACAACAACAATAGCAACAACAACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS08FLP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGGCAACAGTAACGCCGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCCAGAACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGGACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAAGTCTAAATAAGCTAGCATAAATATAACATCC      ]
[-] EMBL CNS09R08             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGGCCCCAGTCACGGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCC GGACAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCGGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGGGGGGATGCGGTGGTACTAA TCTAAATAAGCTAGCATAAga               ]
[-] EMBL CNS09I84             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGGAAGAGTTCCGGCCC GGAAAGAGTCGCCCGTCGGGTGCGGCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCTGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCA                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM600010             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgGTGCCGGTGGCATCCCATCGGAAGGTGGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCCAAAATTATGGCCAAATACGGTTTCAAAGATGGTCAGGGGTTGGGCAAGCAGGAGCAGGGTATGGCGGTCGCCCTGCAGGTGGAGAAAACATCTAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGTGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGATGTTGATGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACCAAGTACGGCGACGTGGTGACTGTGGTAATACACGAGGTGCCGAACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGGAACCTGGGAGGTTGAACGTGCGGGGG                                                      ]
[-] EMBL CNS093K4             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGATATATCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACG                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS09C2K             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAAAATGGTCGGACCGGGCGACGTGGACGATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGG ACCTGGGAGGTTGAACGTGCGGG                                                        ]




>consensus_9516#0
TACTCGCCTCCGCCGTGTAGCAGTCAAACAAAACAAAGCTAGCATTTATATCGATTTTTA
CACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTA
CGACGATCTGGACACGAAGCATGGGCCCGACAAGGTGGCCGGGTGGTCGTCCGGATTGAA
ACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAGC
AATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGCGAAAAAAGA
ACCAACCGAGCAGACGCTCCCGTTCTTGGCAGCTTCCGGCCCCGGACCGACCACATCACT
CACTGATCCCTCTTCCGGCATCGTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCACGAC
CACGAATGCAACGCCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGGGACGT
GGTGGACGAGTACGATCCGATGTGGCCGAACGAGTACGACAAACTGGTGAAGGACCGGAA
AGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGGGAGTA
CAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAACAACAG
CAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCACGGCGG
CAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGACGCCC
CTCGTCGGACGATGAGGAAGAGTTCCGGCCCGGACAGAGTCGCCCGTCGGGTGCGGCCAT
TGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGTGGTTC
CAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATGGCCAA
ATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTCGCCCT
GCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATATCGGC
CACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATAGTCAC
CACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATTATGAA
ATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGACGATGA
GCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACGGTGGT
AATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAGTTTAA
GCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGCGGGCG
GCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGGACCTGGGAGGTTG
AACGTGCGGGGGGGATGCGGTGGTACTAATCTAAATAAGCTAGCATAAATATAACATCCT
TTCCC

consensusID : consensus_9516#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence

                              [ATGCCCGAGCTAAAAAGCGCCAGAGGTCGTGCAGCATAAATCATAACAATGGTCTGTACGACGATCTGGACACGAAGCACGGGCCGACAAGTGGGCGGGTGGTCGTCCCGGATTGAAACTGTTCCAGCGCAGCTGGAAGTGAAGAAAGTTAACAACCGGCATAAAACGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGNGAAAAAAGAACAACGAAAGACGCTCCCGTTCTTGTGCAGCTTCCGGCCCGGACGACACATCACTCATTGATCCCTCTTCCGGCATCTGTAGTAAAAAGCGCCAAAGGGCCATCACGGTCACGAACACGAATGTCGAATGCCCAAACCGATCAGTGCGGCGTCACGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGTGCGAACGAGTACGACAAACTGGTGAATGACCGGAAAGCGAAGGAGCCCCG]

[+] EMBL AL930565             [ATGCCCGAGCTAAAAAGCGCCAGAGGTCGTGCAGCATAAATCATAACAATGGTCTGTACGACGATCTGGACACGAAGCACGGGCCGACAAGTGGGCGGGTGGTCGTCCCGGATTGAAACTGTTCCAGCGCAGCTGGAAGTGAAGAAAGTTAACAACCGGCATAAAACGAAAGCAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGNGAAAAAAGAACAACGAAAGACGCTCCCGTTCTTGTGCAGCTTCCGGCCCGGACGACACATCACTCATTGATCCCTCTTCCGGCATCTGTAGTAAAAAGCGCCAAAGGGCCATCACGGTCACGAACACGAATGTCGAATGCCCAAACCGATCAGTGCGGCGTCACGACGACTACAACTGGGACGTGGTGGACGAGTACGATCCGATGTGTGCGAACGAGTACGACAAACTGGTGAATGACCGGAAAGCGAAGGAGCCCCG]




>consensus_9516#1
ATGCCCGAGCTAAAAAGCGCCAGAGGTCGTGCAGCATAAATCATAACAATGGTCTGTACG
ACGATCTGGACACGAAGCACGGGCCGACAAGTGGGCGGGTGGTCGTCCCGGATTGAAACT
GTTCCAGCGCAGCTGGAAGTGAAGAAAGTTAACAACCGGCATAAAACGAAAGCAATTCTG
CGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGNGAAAAAAGAACAACGA
AAGACGCTCCCGTTCTTGTGCAGCTTCCGGCCCGGACGACACATCACTCATTGATCCCTC
TTCCGGCATCTGTAGTAAAAAGCGCCAAAGGGCCATCACGGTCACGAACACGAATGTCGA
ATGCCCAAACCGATCAGTGCGGCGTCACGACGACTACAACTGGGACGTGGTGGACGAGTA
CGATCCGATGTGTGCGAACGAGTACGACAAACTGGTGAATGACCGGAAAGCGAAGGAGCC
CCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9516#0      TACTCGCCTCCGCCGTGTAGCAGTCAAACAAAACAAAGCTAGCATTTATATCGATTTTTA 60
consensus_9516#1      -----------------------------------------------------ATGCCCG 7
                                                                           **     

consensus_9516#0      CACGAAAAACGCGCTCCAGACGGTCGCTTGCAGCATAAAATCATAAACAATGGCTCTGTA 120
consensus_9516#1      AGCTAAAAA---GCGCCAGA-GGTCG--TGCAGCATAAA-TCATAA-CAATGG-TCTGTA 58
                        * *****   ** ***** *****  *********** ****** ****** ******

consensus_9516#0      CGACGATCTGGACACGAAGCATGGGCCCGACAAGGTGGCCGGGTGGTCGTCC-GGATTGA 179
consensus_9516#1      CGACGATCTGGACACGAAGCACGGGCC-GACAAG-TGGGCGGGTGGTCGTCCCGGATTGA 116
                      ********************* ***** ****** *** ************* *******

consensus_9516#0      AACTGTTCCAGCCGCAGCTGCAAGTGAAGAAAGTTAATCAACCCGCCATAACACCGAAAG 239
consensus_9516#1      AACTGTTCCAGC-GCAGCTGGAAGTGAAGAAAGTTAACAA--CCGGCATAA-AACGAAAG 172
                      ************ ******* ****************  *  *** ***** * ******

consensus_9516#0      CAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGCGAAAAAAG 299
consensus_9516#1      CAATTCTGCGAAAACCAGGCAGTAAGATTCTTACACCCGTTGTGCTGAAGGNGAAAAAAG 232
                      *************************************************** ********

consensus_9516#0      AACCAACCGAGCAGACGCTCCCGTTCTTG-GCAGCTTCCGGCCCCGGACCGACCACATCA 358
consensus_9516#1      AAC--AACGAA-AGACGCTCCCGTTCTTGTGCAGCTTCCGGCCCGGA--CGAC-ACATCA 286
                      ***  * ***  ***************** ************** *   **** ******

consensus_9516#0      CTCACTGATCCCTCTTCCGGCATC-GTAGTAAAAAGCGCCAAAGGGCCCATCACGGTCAC 417
consensus_9516#1      CTCATTGATCCCTCTTCCGGCATCTGTAGTAAAAAGCGCCAAAGGGCC-ATCACGGTCAC 345
                      **** ******************* *********************** ***********

consensus_9516#0      GACCACGAATGC--AACGCCCAACCCGATCAGTGCGGCCGTCACCGACGACTACAACTGG 475
consensus_9516#1      GAACACGAATGTCGAATGCCCAAACCGATCAGTGCGGC-GTCAC-GACGACTACAACTGG 403
                      ** ********   ** ****** ************** ***** ***************

consensus_9516#0      GACGTGGTGGACGAGTACGATCCGATGTGGCCGAACGAGTACGACAAACTGGTGAAGGAC 535
consensus_9516#1      GACGTGGTGGACGAGTACGATCCGATGTGTGCGAACGAGTACGACAAACTGGTGAATGAC 463
                      *****************************  ************************* ***

consensus_9516#0      CGGAAAGCGAAGGAGCCCCCGATAAAGCCGCTGCAGGGCGGGTTCGGGCGGAACCGGCGG 595
consensus_9516#1      CGGAAAGCGAAGGAGCCCCG---------------------------------------- 483
                      *******************                                         

consensus_9516#0      GAGTACAAACGTTCGTTCGGTGGTATGCGCAACAGTAACAACAACAACAATAGCAACAAC 655
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      AACAGCAGCAACAGTAGCGGCGGTGGTGGCGGCGGCAACAGTAACGCCGGCCCCAGTCAC 715
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GGCGGCAGTCAGCCGGACGATGACGGTCCGGTGGCAAAGAAGTTTAGCGGGTTTGCGGGA 775
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      CGCCCCTCGTCGGACGATGAGGAAGAGTTCCGGCCCGGACAGAGTCGCCCGTCGGGTGCG 835
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GCCATTGCACCGCCACCGTCGTTGCAGGAATCGTGTGCCGGTGGCATCCCATCGGAAGGT 895
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GGTTCCAAAGTTTCGCAGCTCGCGGCATACGGTGGTAGTTCGGTGGCGGCTAAAATTATG 955
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GCCAAATACGGTTTCAAAGATGGTCAGGGGCTGGGTAAGCAGGAGCAGGGTATGGCGGTC 1015
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GCCCTGCAGGTGGAGAAAACATCCAAACGGGGTGGTCGAATCGTGCACGAGAAAGATATA 1075
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      TCGGCCACCACCAGCACGGTCAGTGGCAGTGGCGGCGGCAGTGGTTCCGGTACTGAGATA 1135
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GTCACCACCCCTCCGAGCGCAAGTCAGGGCGCCGCATCCGAGCCGTCAATAACCGAGATT 1195
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      ATGAAATCACCGAGCAAGGTGGTGCTGCTGCGGAACATGGTCGGACCGGGCGACGTGGAC 1255
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GATGAGCTGGAACCGGAGGTGAAGGACGAGTGCAACACTAAGTACGGCGACGTAGTGACG 1315
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GTGGTAATACACGAGGTGCCGGACGTGGTGCCCGAGGAAGCGGTTCGCATTTTCGTCGAG 1375
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      TTTAAGCGCATGGAAAGCGCCATCAAGGCGGTGGTCGACCTGAACGGGCGCTTCTTTGGC 1435
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GGGCGGCAGGTGCGGGCCGGCTTTTACAATCAGGAAAAGTTTGAAAACATGGACCTGGGA 1495
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      GGTTGAACGTGCGGGGGGGATGCGGTGGTACTAATCTAAATAAGCTAGCATAAATATAAC 1555
consensus_9516#1      ------------------------------------------------------------
                                                                                  

consensus_9516#0      ATCCTTTCCC 1565
consensus_9516#1      ----------