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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9524#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1638 fasta sequence
[TAATTTGCCAACAACCAAGAGACCGGTAAGGGCCGTGAATTTTCGCCTCCAGTGTGCCGTCCAGTGCCGTCTGTAATTGTTCACATTGCCGTACTTTATAATACTTAAAACAAACAATCATTCATTT-GGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGATTCGATCCGCGACTTTGCGCACTCGTCGTTCAAGGTGGCGCTGGACCGGAAGTTCCCGCTGTACCTCAGCACCAAGAACACGATCCTGAAGAAGTACGACGGCCGGTTCAAGGACATCTTCCAGGAGATTTACGACAAAGACTACAAGAAGCAGTTCGAGGCGCTCGGCATCTGGTACGAGCACCGGCTGATCGACGACATGGTCGCGTACTGCATGAAGGCGGAGGGTGGGTTCGTGTGGGCGTGCAAGAACTACGACGGGGACGTGCAGTCGGACACGGTGGCGCAGGGTTTCGGGTCGCTCGGTCTAATGACCTCGGTGCTGGTGTGCCCGGACGGGCGCACGGTCGAGTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGCAGGGCAAGGAAACGTCCACCAATCCGATTGCGTCGATCTTCGCGTGGACCCGCGGGCTGCTGCACC-GGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCATCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAGACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTGTGCAACC-TTTTTT-TATGTCCTGGTTGGGTGGGAGGCTGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTC-AAACACACACAC-CACAACAAAGCACAGCGTTTTTTGGTGCATTCATTCACATCCTGTCGTCTTATTAATTTGTATTCGTGGTTAAGCATTGGAGAGGTGATTTTCACTGGTATGAGAGATAA]
[+] EMBL CNS08JNM [TAATTTGCCAACAACCAAGAGACCGGTAAGGGCCGTGAATTTTCGCCTCCAGTGTGCCGTCCAGTGCCGTCTGTAATTGTTCACATTGCCGTACTTTATAATACTTAAAACAAACAATCATTCATTT GGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGTGGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGATTCGATCCGCGACTTTGCGCACTCGTCGTTCAAGGTGGCGCTGGACCGGAAGTTCCCGCTGTACCTCAGCACCAAGAACACGATCCTGAAGAAGTACGACGGCCGGTTCAAGGACATCTTCCAGGAGATTTACG ]
[+] EMBL CNS09420 [ CAGTGCCGTCTGTAATTGTTCACATTGCCGTACTTTATAATACTTAAAACAAACAATCATTCATTT GGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGTGGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGAATCGATCCGCGACTTTG ]
[+] EMBL CNS09F05 [ CATTGCCGTACTTTATAATACTTAAAACAAACAATCATTCATTTGGGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGC AGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGT GTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGATTCGATCCGCGACTTTGCGCACTCGTCGTTCAAGGTGGCGCTGGACCGGAAGTTCCCGCTGTACCTCAGCACCAAGAACACGATCCTGAAGAAGTACGACGGCCGGTTCAAGGACATCTTCCAGGAGATTTACGACAAAGACTACAAGAAGCAGTTCGAGGCGCTCGGCATCTGGTACGAGCACCGGCTGATCGACGACATGGTCGCGTACTGCATGAAGGCGGAGGGTGGGTTCGTGTGGGCGTGCAAGAACTACGACGGGGACGTGCAGTCGGACACGGTGGCGCAGGGTTTCGGGTCGCTCGGTCTAATGACCTCGGTGCTGGTGTGCCC ]
[+] EMBL BM611419 [ ccgCATTGCTGTACTTTATAATACTTAAAACAAACAATCATTCATTT GGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCGCATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGGTCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCGGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGATTCGATCCGCGACTTTGCGCACTCGTCGT ]
[+] EMBL BX606879 [ GGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGATTCGATCTGCGACTTTGCGCACTCGTCGTTCAAGGTGGCGCTGGACCGGAAGTTCCCGCTGTACCTCAG ]
[-] EMBL CNS09F06 [ TGTACAATCTGGACGATTCGATCCGCGACTTTGCGCACTCGTCGTTCAAGGTGGCGCTGGACCGGAAGTTCCCGCTGTACCTCAGCACCAAGAACACGATCCTGAAGAAGTACGACGGCCGGTTCAAGAACATCTTCCAGGAGATTTACGACAAAGACTACAAGAAGCAGTTCGAGGCGCTCGGCTTCTGGTACGAGCACCGGCTGATCGACAACATGGTCGCGTACTGCATGAAGGCGGAGGGTGGGTTCGTGTGGGCGTGCAAGAACTACGACGGGGACGTGCAGTCGGACACGGTGGCGCAGGGTTTCGGGTCGCTCGGTCTAATGACCTCGGGGCTGGTGTGCCCGGACGGGCGCACGGTCGAGTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGCAGGGCAAGGAAACGTCCACCAATCCGATTGCGTCGATCTTCGCGTGGACCCGCGGGCTGCTGCACC GGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCTTCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAGACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTGTGCAACC TTTTTT TATGTCCTGGTTGGGTGGGAGGCTGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTCAAAACACACACACACACAACAAAGCACAGCGTTTTTTGGTGCATTCATTCACATCCTGTCGTCTTATTAATTTGTATTCGTGGTTAAGCATTGGAGAGGTGATTTTCACTGGTATGAGAGATAA]
[+] EMBL BX602332 [ GTACCTCAGCACCAAGAACACGATCCTGAAGAAGTACGACGGCCGGTTCAAGGACATCTTCCAGGAGATTTACGACAAAGACTACAAGAAGCAGTTCGAGGCGCTCGGCATCTGGTACGAGCACCGGCTGATCGACGACATGGTCGCGTACTGCATGAAGGCGGAGGGTGGGTTCGTGTGGGCGTGCAAGAACTACGACGGGGACGTGCAGTCGGACACGGTGGCGCAGGGTTTCGGGTCGCTCGGTCTGATGACCTCGGTGCTGGTGTGCCCGGACGGGCGCACGGTCGAGTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGCAGGGCAAGGAAACGTCCACCAATCCGATCGCGTCGATCTTCGCGTGGACCCGCGGGCTGCTGCACC GGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCATCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAAACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCTGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTGTGCAACC TTTTTTATATGTCCTGGTTGGGTGGGAGGCAGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTC ACACACACACAC CACAACAAAGC ]
[-] EMBL CNS08JNN [ AGGAGATTTACGACAAAGACTACAAGAAGCAGTTCGAGGCGCTCGGCTTCTGGTACGAGCACCGGCTGATCGACCACATGGTCGCGTACTGCATGAAGGCGGAGGGTGGGTTCGTGTGGGCGTGCAAGAACTACGACGGGGACGTGCAGTCGGAAACGGTGGCGCAGGGTTTCGGGTCGCTCGGTCTAATGACCTCGGTGCTGGTGTGCCCGGACGGGCGCACGGTCGAGTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGCAGGGCAAGGAAACGTCCACCAATCCGATTGCGTCGATCTTCGCGTGGACCCGCGGGCTGCTGCACCGGGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCATCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAGACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTGTGCAACCTTTTTTT TATGTCCTGGTTGGGTGGGAGGCTGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTCTAAACACACACACACACAACAAAGCACAGCGTTTTTTGGTGCATTCATTCACATCCTGTCGTCTTATTAATTTGTATTCGTG ]
consensusID : consensus_9524#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 748 fasta sequence
[CCGGGTCAGTGGCGGTCACGTCGTCGTCGTCGGGTGTAGTGTAGCTCTCTGTGGTATCGTTCGGTGTCGCTTGATCGTGGCAAGCTTATTTCCATAGCATTCCTGTTGCCAGCGCTGTGATTCTGATTTCCTTCTTGTACAGAGCCAGCATACATTAGTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGATTCGATCTGCGACTTTGCGCAC]
[+] EMBL BM611923 [CCGGGTCAGTGGCGGTCACGTCGTCGTCGTCGGGTGTCGTGTAGCTCTCTGTGGTATCGTTCGGTGTCGCTTGATCGTGGCAAGCTTATTTCCATAGCATTCCTGTTGCCAGCGCTGTGATTCTGATTTCCTTCTTGTACAGAGCCAGCATACATTAGTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAA ]
[+] EMBL BM605068 [CCGGGTCAGTGGCGGTCACGTCGTCGTCGTCGGGTGTAGTGTAGCTCTCTGTGGTATCGTTCGGTGTCGCTTGATCGTGGCAAGCTTATTTCCATAGCATTCCTGTTGCCAGCGCTGTGATTCTGATTTCCTTCTTGTACAGAGCCAGCATACATTAGTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGGTCCGCG ]
[+] EMBL BX604268 [ gGGGTCAGTGGCGGTCACGTCGTCGTCGTCGGGTGTAGTGTAGCTCTCTGTGGTATCGTTCGGTGTCGCTTGATCGTGGCAAGCTTATTTCCATAGCATTCCTGTTGCCAGCGCTGTGATTCTGATTTCCTTCTTGTACAGAGCCAGCATACATTAGTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTGGACGATTCGATCTGCGACTTTGCGCAC]
[+] EMBL BX605218 [ TCGTGGCAAGCTTATTTCCATAGCATTCCTGTTGCCAGCGCTGTGATTCTGATTTCCTTCTTGTACAGAGCCAGCATACATTAGTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCAC ]
[+] EMBL BX606125 [ CTTCTTGTACAGAGCCAGCATACATTAGTGCACATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTG ]
consensusID : consensus_9524#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence
[CGACCCACGCGTCCGCCCACGCGTCCGGTTCACATTGCTGTACTTTATAATACTTAAAACAAACAATCATTCATTTGGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCGCATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGGTCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCGGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTG]
[+] EMBL BM654975 [CGACCCACGCGTCCGCCCACGCGTCCGGTTCACATTGCTGTACTTTATAATACTTAAAACAAACAATCATTCATTTGGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCGCATCGAAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTGGGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGGTCGACTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCGGGCTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAATCTG]
consensusID : consensus_9524#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 657 fasta sequence
[CCGCCCACGCGTCCGCGGACACGGTGGCGCAGGGTTTCGGGTCGCTCGGTCTGATGACCTCGGTGCTGGTGTGCCCGGACGGGCGCACGGTCGAGTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGCAGGGCAAGGAAACGTCCACCAATCCGATCGCGTCGATCTTCGCGTGGACCCGCGGGCTGCTGCACCGGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCATCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAAACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGAGTGCATCCTTTTTTATATGTCCTGGTTGGGTGGGAGGCAGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTCAACACACACACACAACAAAGCGCAGCGTTTTATGGTGCATTCATTCACATCCTGTCGTCTTATTAATTTGTATTCGTGGTTAAGCATTGGAGAGGTGATTTTCACTGGTATAAGCGATAAATAAAC]
[+] EMBL BM605772 [CCGCCCACGCGTCCGCGGACACGGTGGCGCAGGGTTTCGGGTCGCTCGGTCTGATGACCTCGGTGCTGGTGTGCCCGGACGGGCGCACGGTCGAGTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGCAGGGCAAGGAAACGTCCACCAATCCGATCGCGTCGATCTTCGCGTGGACCCGCGGGCTGCTGCACCGGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCATCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAAACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGAGTGCATCCTTTTTTATATGTCCTGGTTGGGTGGGAGGCAGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTCAACACACACACACAACAAAGCGCAGCGTTTTATGGTGCATTCATTCACATCCTGTCGTCTTATTAATTTGTATTCGTGGTTAAGCATTGGAGAGGTGATTTTCACTGGTATAAGCGATAAATAAAC]
[+] EMBL BX614891 [ CTACCGCCAGCACCAGCAGGGCAAGGAAACGTCCACCAATCCGATCGCGTCGATCTTCGCGTGGAACCGCGGGCTGCTGCACCGGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAG ]
consensusID : consensus_9524#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence
[CCGGGACCCGCGGGCTGCTGCACCGGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCATCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAGACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTGTGCAACCTTTTTTTTATGTCCTGGTTGGGTGGGAGGCTGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTCAACACACACACACACACACACACACACACACACAACAAAGCGCAGCGTTTTTTGGTGCATTCATTCACATACTGTCGTCTTATTAATTTGTATTCGTGGTTAAGCATTGGAGAGGTGATTTTCACTGGTATGAGAGATAAATAAACCATTTTTGGGGCATTTAT]
[+] EMBL BM608418 [CCGGGACCCGCGGGCTGCTGCACCGGGCCAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTGTGCATCGACACGATCGAGTCGGGCTTCATGACCAAAGATTTGGCCATCTGCATCAAGGGTATGGCGAACGTGAAGCGCACCGACTACATGGAGACGTTCGAGTTCATGAACAAGCTGGGCGAAAATCTGCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTGTGCAACCTTTTTTTTATGTCCTGGTTGGGTGGGAGGCTGTGTGTGGACAAAAGCCCTCGCCACTAGCCCTTACTTAGCATTTACCTTTTCAACACACACACACACACACACACACACACACACAACAAAGCGCAGCGTTTTTTGGTGCATTCATTCACATACTGTCGTCTTATTAATTTGTATTCGTGGTTAAGCATTGGAGAGGTGATTTTCACTGGTATGAGAGATAAATAAACCATTTTTGGGGCATTTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 TAATTTGCCAACAACCAAGAGACCGGTAAGGGCCGTGAATTTTCGCCTCCAGTGTGCCGT 60
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 CCAGTGCCGTCTGTAATTGTTCACATTGCCGTACTTTATAATACTTAAAACAAACAATCA 120
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 TTCATTTGGATAATAGTCTTCAGCACCAACCCAAATAGCCCTGCACATCGAAATGGCGTC 180
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGCGCATCATCTG 240
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GGACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCTGCACACGTACGA 300
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 TCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGACTGTGCGGAAGC 360
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGCCGGACGAGGCGCGCGT 420
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 CGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGATCCGCAACATCCT 480
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGCGGCTGGTGCCCGG 540
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 CTGGGAGAAGCCGATCATTATCGGGCGCCACGCGCACGGCGACCAGTACAAGGCGACCGA 600
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 CTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCACGCCGGCCGACGGTAGCGA 660
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 ACCGACCACGTACGTGGTGAACGAGTACAAGAGTGCCGGTGTCGCGATGGGCATGTACAA 720
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 TCTGGACGATTCGATCCGCGACTTTGCGCACTCGTCGTTCAAGGTGGCGCTGGACCGGAA 780
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GTTCCCGCTGTACCTCAGCACCAAGAACACGATCCTGAAGAAGTACGACGGCCGGTTCAA 840
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GGACATCTTCCAGGAGATTTACGACAAAGACTACAAGAAGCAGTTCGAGGCGCTCGGCAT 900
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 ------------------------------------------------------------
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 CTGGTACGAGCACCGGCTGATCGACGACATGGTCGCGTACTGCATGAAGGCGGAGGGTGG 960
consensus_9524#1 ------------------------------------------------------------
consensus_9524#2 ------------------------------------------------------------
consensus_9524#3 --------------------------CCGCCCACGCGTCCGCGGACACGGTGGCGCAGGG 34
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GTTCGTGTGGGCGTGCAAGAACTACGACGGGGACGTGCAGTCGGACACGGTGGCGCAGGG 1020
consensus_9524#1 -----------CCGGGTCAGTGGCGGTCACGTCGTCGTCGTCGGGTGTAGTGTAGCTCTC 49
consensus_9524#2 -------------------------------------------------------CGACC 5
consensus_9524#3 TTTCGGGTCGCTCGGTCTGATGACCTCGGTGCTGGTGTGCCCGGACGGGCGCACGGTCGA 94
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 TTTCGGGTCGCTCGGTCTAATGACCTCGGTGCTGGTGTGCCCGGACGGGCGCACGGTCGA 1080
consensus_9524#1 TGTGGTATCGTTCGGTGTCGCTTGATCGTGGCAAGCTTATTTCCATAGCATTCCTGTTGC 109
consensus_9524#2 CACG-CGTCCGCCCACGCGTCCGGTTCACATT--GCTGTACTTTATAATACTTAAAACAA 62
consensus_9524#3 GTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGC-AGGGCAAGG 153
consensus_9524#4 ------------------------------------------------------------
consensus_9524#0 GTCGGAGGCGGCCCACGGTACCGTGACGCGGCACTACCGCCAGCACCAGC-AGGGCAAGG 1139
consensus_9524#1 CAGCGCTGTGATTCTGATTTCCTTCTTGTACAGAGCCAGCATACATTAG--TGCACATCG 167
consensus_9524#2 ACAATCATTCATTTGGATAATAGTCTT---CAGCACCAACCCAAATAGCCCTGCGCATCG 119
consensus_9524#3 AAACGTCCACCAATCCGATCGCGTCGATCTTCGCGTGGACCCGCGG-GCTGCTGCACCGG 212
consensus_9524#4 ---------------------------------CCGGGACCCGCGG-GCTGCTGCACCGG 26
consensus_9524#0 AAACGTCCACCAATCCGATTGCGTCGATCTTCGCGTGGACCCGCGG-GCTGCTGCACCGG 1198
consensus_9524#1 AAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGC 227
consensus_9524#2 AAATGGCGTCGAAAATCAAGGCCGGACCCGTGGTGGACATCCTGGGCGATGAGATGACGC 179
* ** ** * ** **
consensus_9524#3 GC-CAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTG-T 270
consensus_9524#4 GC-CAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTG-T 84
consensus_9524#0 GC-CAAGCTGGACGATAATGCCGAGCTGAAGCGGTTCGCCGAAACGCTCGAGAAGGTG-T 1256
consensus_9524#1 GCATCATCTGG--GACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCT 285
consensus_9524#2 GCATCATCTGG--GACTCGATCAAGGAGAAGCTGATCCTCCCGTTCCTGGACATTGAGCT 237
** * **** ** * ** ***** * ** * ** ** * * * *
consensus_9524#3 GCATCGACACGATC---GAGTCGGGCTTCATGACCAAAGATTTGGCCA--TCTGCATCAA 325
consensus_9524#4 GCATCGACACGATC---GAGTCGGGCTTCATGACCAAAGATTTGGCCA--TCTGCATCAA 139
consensus_9524#0 GCATCGACACGATC---GAGTCGGGCTTCATGACCAAAGATTTGGCCA--TCTGCATCAA 1311
consensus_9524#1 GCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGATCGA 345
consensus_9524#2 GCACACGTACGATCTCGGCATCGAGCATCGCGACGCGACGAACGATCAGGTCACGGTCGA 297
*** ****** * *** ** ** *** * * ** ** ** *
consensus_9524#3 GGGTATGGCGAACGTGAAGCG---CACCGACTACATGGAAACGTTCGAGTTCATGAACAA 382
consensus_9524#4 GGGTATGGCGAACGTGAAGCG---CACCGACTACATGGAGACGTTCGAGTTCATGAACAA 196
consensus_9524#0 GGGTATGGCGAACGTGAAGCG---CACCGACTACATGGAGACGTTCGAGTTCATGAACAA 1368
consensus_9524#1 CTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGC-CGG 404
consensus_9524#2 CTGTGCGGAAGCGGTGAAGCGGTACAACGTCGGCATCAAGTGTGCCACCATCACGC-CGG 356
** ** ******** ** ** * *** * * *** * *
consensus_9524#3 GCTGGGCGAAAATCT-GCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGAG 441
consensus_9524#4 GCTGGGCGAAAATCT-GCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTG 255
consensus_9524#0 GCTGGGCGAAAATCT-GCAGGCCGCGTTGACGCAGAGCCGGCTTTAAAGGGAGGGAAGTG 1427
consensus_9524#1 ACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGA 464
consensus_9524#2 ACGAGGCGCGCGTCGAGGAGTTCAAGCTGAAGCAGATGTGGCGCTCGCCGAACGGCACGA 416
* **** ** * ** * * *** ***** *** * * * ** *
consensus_9524#3 TGCATCCTTTTTTATATGTCCTGGTTGGGTGGGAGGCAGTGTGTGGACAAAAGCCCTCGC 501
consensus_9524#4 TGCAACCTTTTTTTTATGTCCTGGTTGGGTGGGAGGCTGTGTGTGGACAAAAGCCCTCGC 315
consensus_9524#0 TGCAACCTTTTTT-TATGTCCTGGTTGGGTGGGAGGCTGTGTGTGGACAAAAGCCCTCGC 1486
consensus_9524#1 TCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGC 524
consensus_9524#2 TCCGCAACATCCTGGGCGGTACGGTGTTCCGCGAGGCGATCATCTGCAAGAACGTGCCGC 476
* * * * * *** * ***** * * * ** ***
consensus_9524#3 CACTAGCCCTTACTTAGCATTTACC--TTTTCAACACACACACACA-------------- 545
consensus_9524#4 CACTAGCCCTTACTTAGCATTTACC--TTTTCAACACACACACACACACACACACACACA 373
consensus_9524#0 CACTAGCCCTTACTTAGCATTTACC--TTTTCAA-ACACACACACC-------------- 1529
consensus_9524#1 GGCTGGTGCCCGGCTGGGAGAAGCCGATCATTATCGGGCGC-CACGCGCACGGCGAC--- 580
consensus_9524#2 GGCTGGTGCCGGGCTGGGAGAAGCCGATCATTATCGGGCGC-CACGCGCACGGCGAC--- 532
** * * * * * ** * * * * * ***
consensus_9524#3 ------ACAAAGCGCAGCGTTTTATGGTGCATTCATTCA-CATCCTGTCGTCTTA-TTAA 597
consensus_9524#4 CACACAACAAAGCGCAGCGTTTTTTGGTGCATTCATTCA-CATACTGTCGTCTTA-TTAA 431
consensus_9524#0 ---ACAACAAAGCACAGCGTTTTTTGGTGCATTCATTCA-CATCCTGTCGTCTTA-TTAA 1584
consensus_9524#1 --CAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCA 638
consensus_9524#2 --CAGTACAAGGCGACCGACTTTGTGGTGCCGGTGCCGGGCAAGCTGGAGATGAAGTTCA 590
**** ** *** ****** ** *** * * ** *
consensus_9524#3 TTTGTATTCGTGGTTAAGCATTGGAGAGGTGATT--TTCACTGGTATAAGCGATAAATAA 655
consensus_9524#4 TTTGTATTCGTGGTTAAGCATTGGAGAGGTGATT--TTCACTGGTATGAGAGATAAATAA 489
consensus_9524#0 TTTGTATTCGTGGTTAAGCATTGGAGAGGTGATT--TTCACTGGTATGAGAGATAA---- 1638
consensus_9524#1 CGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAG-TGCCGGT 697
consensus_9524#2 CGCCGGCCGACGGTAGCGAACCGACCACGTACGTGGTGAACGAGTACAAGAG-TGCCGGT 649
*** * * * * ** * * ** *** ** * *
consensus_9524#3 AC------------------------------------------------- 657
consensus_9524#4 ACCATTTTTGGGGCATTTAT------------------------------- 509
consensus_9524#0 ---------------------------------------------------
consensus_9524#1 GTCGCGATGGGCATGTACAATCTGGACGATTCGATCTGCGACTTTGCGCAC 748
consensus_9524#2 GTCGCGATGGGCATGTACAATCTG--------------------------- 673
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||