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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9534#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1123 fasta sequence
[CTTTGTTTACGTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA-G-ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC-A-TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG-TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC-TCA-AGGGGC-TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG-ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC-TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGCAATATGAAA]
[+] EMBL CNS09OXZ [CTTTGTTTACGTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTTTCGCA TGAAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAA ]
[+] EMBL CNS09D3U [ cTTTACCTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACG CAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAA ]
[+] EMBL CNS09Q3C [ TTCCTTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCACAGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACATGAAGAAGCAGGGCATCCGGTCGATG ]
[+] EMBL CNS08K4X [ tgtaGTCTGCATTTGCCACTGGTGCTGCAG GTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA GAACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCCCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG A ]
[+] EMBL BM597923 [ ccgCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCTGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATCTTCA AGGGGCTTGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGG ]
[+] EMBL CNS09OTY [ TGGATTTG CGGTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCA TGAAACGCGGTGCAGGAAA AAAACAGAACAATTGATGGGCAGGGGATGGGTTA ]
[+] EMBL CNS09KW7 [ CGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTACAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCA TGAAACGCGG ]
[+] EMBL BX620888 [ TCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAAC ]
[-] EMBL CNS09OY0 [ CATACGCACCGCCCAAAAAAAGATCCCGAACTGTTGCGCGATCGAGAGGCCTTCAAACGGCGGGCGAT GCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC ATTCCG TAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGCA ]
[-] EMBL CNS09KW8 [ GCCCCACGATGGATCCCGAACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTTAAGAACATGCGCACCCGCCATCAGGAAGGTGACGATCAA TCC CTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACG TGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAAC ]
[-] EMBL CNS09OTZ [ GCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGAACATGCGCACCCGCCATCAGGAAGGTGACGATCAA TCC CTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATAAAAACAATTATACTGCAATATGAAA]
[+] EMBL BX617372 [ TGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCCAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGCGATGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCTGATCGTCCGTGAAAACGTGGCTCCAAGGGTAAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGA ]
[-] EMBL CNS09Q3D [ GAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTTAAGGACATGCGCACCCGCCATCAGGAAGGTGACGATC AGTCCG TAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTGTTTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACGTACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGTTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACG TGACGCAGTCGAACGCGGTGCGGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAAAAAgg ]
[-] EMBL CNS09D3V [ TGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAAT GCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTTTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAAT ]
[+] EMBL BX612451 [ ACGATC TCA AGGGGC TGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATA ]
[-] EMBL CNS08K4Y [ CCATGGTCGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGgactgt ]
consensusID : consensus_9534#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 822 fasta sequence
[CAGAATTGCCCGATGGTTAGCACCGCCCCACGATGGATCCCGCTCTGTTGCGCGAACGAGAGTGCCTTCAAAAGGCGGGCGATGTGCAACGCCAACCTGTTGAGAAGAAGTGCAAAAACGGAAAGCTCGTTTGCCTGCACCGAAGTGTACATCNAAGTATAGCCAATGTGCGCCTGCGATGCTGCCTGCACCTGCAAGTATCTGATGCCTCCAAGTTTACATAAGACTATGTCCTGTGTAGCTCCCAGTATCCGCTATCGGCTGTTAGTATTGGCAAAACACTGGAGTTCCGGTAGGAGATGGCTAACACAACTTGGCCTGGACCTAACACCCCTGGCCCGTAAATTCCATGGTGACATGGTGGGTTAGAACGGGAGATTACCCAATTTCCCCTGGNCTNTTTTATAACCTGGCACTTTGTGGGCAATCNCTGGCACAATGAATTCCCCCCTTTGCNGGAACCCTGGAAGGGAAAAACGATCCGAAAAAATCCGCCCCGAATAGGGGCCGTTTNCCCGNGCGGAAGCAGCATTAATAAGTTNTCCCCGCGGCGGGGGAAACGACTTTATCCCATGGAGGCTCCGTGCCGCACGGCGGCGTTAGTGTAAGAGCTAACTGAACAGAGAACCCGAGGGGCATTAGTGCNGGGTGCCAGCTTACCCTCCGCCCGACTAAAAAAGAGTCGAGGGTCGAGGTGCGGGGCATACATAAAAAGGGTGACNCCGGTGGACCCACCCGATTGGACTAGCACGTAGGCTACAACAATACCAANAAGCGACCGATCAGAAAATAATGCAGTGTCGCCCGCAAACAGAAAACGAA]
[+] EMBL AL934629 [CAGAATTGCCCGATGGTTAGCACCGCCCCACGATGGATCCCGCTCTGTTGCGCGAACGAGAGTGCCTTCAAAAGGCGGGCGATGTGCAACGCCAACCTGTTGAGAAGAAGTGCAAAAACGGAAAGCTCGTTTGCCTGCACCGAAGTGTACATCNAAGTATAGCCAATGTGCGCCTGCGATGCTGCCTGCACCTGCAAGTATCTGATGCCTCCAAGTTTACATAAGACTATGTCCTGTGTAGCTCCCAGTATCCGCTATCGGCTGTTAGTATTGGCAAAACACTGGAGTTCCGGTAGGAGATGGCTAACACAACTTGGCCTGGACCTAACACCCCTGGCCCGTAAATTCCATGGTGACATGGTGGGTTAGAACGGGAGATTACCCAATTTCCCCTGGNCTNTTTTATAACCTGGCACTTTGTGGGCAATCNCTGGCACAATGAATTCCCCCCTTTGCNGGAACCCTGGAAGGGAAAAACGATCCGAAAAAATCCGCCCCGAATAGGGGCCGTTTNCCCGNGCGGAAGCAGCATTAATAAGTTNTCCCCGCGGCGGGGGAAACGACTTTATCCCATGGAGGCTCCGTGCCGCACGGCGGCGTTAGTGTAAGAGCTAACTGAACAGAGAACCCGAGGGGCATTAGTGCNGGGTGCCAGCTTACCCTCCGCCCGACTAAAAAAGAGTCGAGGGTCGAGGTGCGGGGCATACATAAAAAGGGTGACNCCGGTGGACCCACCCGATTGGACTAGCACGTAGGCTACAACAATACCAANAAGCGACCGATCAGAAAATAATGCAGTGTCGCCCGCAAACAGAAAACGAA]
consensusID : consensus_9534#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 723 fasta sequence
[TTGAGTTTCTGCCCGTAAACAAAACATTCACACAATTTCCCTTATTTATTTGACCTACCTCTATTGCTTTCAAACAGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATCTCAAGGGGCTGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACGACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGATTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGATGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATT]
[+] EMBL BX613225 [TTGAGTTTCTGCCCGTAAACAAAACATTCACACAATTTCCCTTATTTATTTGACCTACCTCTATTGCTTTCAAACAGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATCTCAAGGGGCTGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACGACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGATTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGATGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9534#0 CTTTGTTTACGTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATA 60
consensus_9534#2 ------------------------------------------------------------
consensus_9534#1 ------------------------------------------------------------
consensus_9534#0 ATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGAC 120
consensus_9534#2 ------------------------------------------------------------
consensus_9534#1 ---------------------------------------------CAGAATTGCCCGATG 15
consensus_9534#0 ATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAG-GCCTTCAAACGG 179
consensus_9534#2 ------------------------------------------------------------
consensus_9534#1 GTTAGCACCGCCCCACGATGGATCCCGCTCTGTTGCGCGAACGAGAGTGCCTTCAAAAGG 75
consensus_9534#0 CGGGCGATG-GCAACGCCAACC-GTTGAGAAGAAG-GCAAAAACGGAAAGCTCGTTTGCC 236
consensus_9534#2 ------------------------------------------------------------
consensus_9534#1 CGGGCGATGTGCAACGCCAACCTGTTGAGAAGAAGTGCAAAAACGGAAAGCTCGTTTGCC 135
consensus_9534#0 -GCACCGAAGACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCC 295
consensus_9534#2 ------------------------------------------------------------
consensus_9534#1 TGCACCGAAGTGTACATCNAAGTATAGCCAATG-----TGCGCCTGCGAT-GCTGCCTGC 189
consensus_9534#0 AATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTG 355
consensus_9534#2 ------------------------------------------------------------
consensus_9534#1 ACCTGCAAG----TATCTGATGCCTCCAAGTTT-------ACATAAGACTATGTCCTGTG 238
consensus_9534#0 AAGCACATGCGCACCCGCCATCAG--GAAGGTGACGATCATCCGCTAACGCTGGACGAAA 413
consensus_9534#2 -----------------------T--TGAGTTTCTGCCCGTAAACAAAACATTCACACAA 35
consensus_9534#1 TAGCTCCCA-GTATCCGCTATCGGCTGTTAGTATTGGCAAAACACTGGAGTTCCGGTAGG 297
* * * *
consensus_9534#0 TCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGG 473
consensus_9534#2 TTTC---CCTTATTTATTTGACCTACCTCT-ATTG-CTTTCAAACAGTGGCTCCAAGGGG 90
consensus_9534#1 AGATGG-CTAACACAACTTGGCCTGGACCT-AACACCCCTGGCCCGTAAATTCCATGGTG 355
* * * * * * * * **** ** *
consensus_9534#0 AAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGT 533
consensus_9534#2 AAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGT 150
consensus_9534#1 ACATGGTGGGTTAGAA-CGGGAGATT-ACCCAATTTCCCCTGGNCTNTTT---TATAACC 410
* * ** * * ** * **** * * ** *** * *** * **
consensus_9534#0 CGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATCTCA 593
consensus_9534#2 CGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATCTCA 210
consensus_9534#1 TGGCACTTTG---------TGGGCAATCNCTGGCACAA----TGAATTCCCCCCTTTGCN 457
** ** ** ** *** * **** * * * *
consensus_9534#0 AGGGGCTGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGG 653
consensus_9534#2 AGGGGCTGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGG 270
consensus_9534#1 GGAACCCTGGAAGGGAA-----AAACGATCCGAAAAAATCCGCCCCGAATAGGGGCCGTT 512
* * ** *** ***** * * **** *** * * *
consensus_9534#0 TGCTGAAA--AATCGAGCATCGG-AAATCATCTTCATTACGCGCCCGAACGACAAGAA-- 708
consensus_9534#2 TGCTGAAA--AATCGAGCATCGG-AAATCATCTTCATTACGCGCCCGAACGACAAGAA-- 325
consensus_9534#1 TNCCCGNGCGGAAGCAGCATTAATAAGTTNTCCCCGCGGCG-GGGGAAACGACTTTATCC 571
* * * ***** ** * ** * ** * ****** *
consensus_9534#0 ---GAAGATCCTGTTCTACAACGACCGGACGGC-CAACTTCCAGGTGGACGAGGATTTCC 764
consensus_9534#2 ---GAAGATCCTGTTCTACAACGACCGGACGGC-CAACTTCCAGGTGGACGAGGATTTCC 381
consensus_9534#1 CATGGAGGCTCCGTGCCGCACGGCGGCGTTAGTGTAAGAGCTAACTGAACAGAGAACCCG 631
* ** * ** * ** * * * ** * * ** ** ** *
consensus_9534#0 AGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACC 824
consensus_9534#2 AGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGATTACC 441
consensus_9534#1 AGGGGCATTAGTGCNGGGTGCCAGCTTACCCTCCGCCCGACTAAAAAAGAGTCGAGGGTC 691
** ** * * ** *** * * ** * * *** ** * * *** *
consensus_9534#0 TGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGA 884
consensus_9534#2 TGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGA 501
consensus_9534#1 --GAGGTGCGGGGCATACATAAAAAGGGTGACNCCGG-TGGACCCACCCGATTGGACTAG 748
*** ** ****** * * * *** ** ** * *** * *
consensus_9534#0 AGCGGAAGAAGCTG-GCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACAT 943
consensus_9534#2 AGCGGAAGAAGCTG-GCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACAT 560
consensus_9534#1 CACGTAGGCTACAACAATACCAANAAGCGACCGATCAGAAAATAATGCAGTGTCG----- 803
** * * * * *** ***** * * *** ** ** **
consensus_9534#0 TTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAG 1003
consensus_9534#2 TTGGCCGACGTGCTGGAGATGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAG 620
consensus_9534#1 ----CCCGCAAACAGAAAACGAA------------------------------------- 822
** * * * * * * *
consensus_9534#0 GAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTTATAAACTAGAT 1063
consensus_9534#2 GAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTT-ATAAACTAGAT 679
consensus_9534#1 ------------------------------------------------------------
consensus_9534#0 AAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGCAATATGAAA 1123
consensus_9534#2 AAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATT---------------- 723
consensus_9534#1 ------------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||