These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9537#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1084 fasta sequence [ATCTGCCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC-GGAGCG-AAACTG-AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG-TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAACCAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAGAAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCCGAGATTCCAACCGAAACGGAAGTGCCTCCCACTGAAGTGGCTGAACCGGAACCACCTACTCCAGGTGTAGTTTATAGAAATGCATTG] [+] EMBL CNS08XLJ [ATCTGCCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTGTTCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAACCAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAGAAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCCGAGATTCCAACCGAAACGGAAGTGCCTCCCACTGAAGTGGCTGAACCGGAACCACCTACTCCAGGTGTAGTTTATAGAAATGCATTG] [+] EMBL CNS099T3 [ tCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACAGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCA ] [+] EMBL CNS08R61 [ AGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGcacgca ] [+] EMBL CNS09AY0 [ GGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTA ] [+] EMBL CNS09HGZ [ TAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGACCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAAC ] [+] EMBL CNS09FCN [ AGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGT CTTCA CAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCA ] [+] EMBL CNS09KDT [ CAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAACCAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAGAAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCC ] [+] EMBL CNS09FDR [ CGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGC ACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAaa ] [+] EMBL CNS09FE5 [ GATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCA ] [+] EMBL CNS09FBP [ GCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCCGGGAGCGAAAACTGAAACAGCT ] [+] EMBL CNS09QR5 [ CCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTATTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTATGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCGTCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGAT ] consensusID : consensus_9537#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 689 fasta sequence [CCGCCCACGCGTCCGGACAACAGCTTACGTTCTTTTGGTAGGTGATCGAGAGCCAGTTCACTTGTAGTGGGACTGTTAACTTTGTGAAGATATTGTTAACAGTCCATTTTAGTTGATTGAAATGTCTAGCAAATAATTTCGCTAGAGAAGAGTTAAAAAATCAGTAGGAACTGTGTATATTGCGTTATATTGTTAAATGACACCTCAAGTGTTTTAAGCGATTGTGTTAGAAGTGCTATAATAAAGTGATTGATTAAGAATTTGAAAGCCAAACATTTGTTTGAGAAGTGGTGGTCAGAGACTTTGAGCAAAATAACATAACAAGCAGAAAAAGCTTTTGTCTTTTTCCATACATCGATCAAACCTTTACTGGTGTTAACGAAACAACATGTCAGCAACAATTGCGCATACAGATGGCCTCAATAGTAGTGCCAACATTATTTCACCAATCAACATGTTCTACTTCCTGCTTACTCCTGCATTATTGCTGTGGTTTTTCTATTGGCGTTTATCACGACGCCACATGCTAGAACTAGCTGAACGGATACCTGGACCGAAAGGACTCCCTTTGATTGGAAACGCCTTAGACCTTGTTGGCAGTTCGCACTCCGTGTTCCGCACAATTATCGAGAAGGGCAAGGAATATAACGAAGTGATTAAAATATGGATAGGACCGAAGCTAATCGTCT] [+] EMBL BM622092 [CCGCCCACGCGTCCGGACAACAGCTTACGTTCTTTTGGTAGGTGATCGAGAGCCAGTTCACTTGTAGTGGGACTGTTAACTTTGTGAAGATATTGTTAACAGTCCATTTTAGTTGATTGAAATGTCTAGCAAATAATTTCGCTAGAGAAGAGTTAAAAAATCAGTAGGAACTGTGTATATTGCGTTATATTGTTAAATGACACCTCAAGTGTTTTAAGCGATTGTGTTAGAAGTGCTATAATAAAGTGATTGATTAAGAATTTGAAAGCCAAACATTTGTTTGAGAAGTGGTGGTCAGAGACTTTGAGCAAAATAACATAACAAGCAGAAAAAGCTTTTGTCTTTTTCCATACATCGATCAAACCTTTACTGGTGTTAACGAAACAACATGTCAGCAACAATTGCGCATACAGATGGCCTCAATAGTAGTGCCAACATTATTTCACCAATCAACATGTTCTACTTCCTGCTTACTCCTGCATTATTGCTGTGGTTTTTCTATTGGCGTTTATCACGACGCCACATGCTAGAACTAGCTGAACGGATACCTGGACCGAAAGGACTCCCTTTGATTGGAAACGCCTTAGACCTTGTTGGCAGTTCGCACTCCGTGTTCCGCACAATTATCGAGAAGGGCAAGGAATATAACGAAGTGATTAAAATATGGATAGGACCGAAGCTAATCGTCT] consensusID : consensus_9537#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 679 fasta sequence [CCGAAACATTACAAAAATCAATCACAACATTGTGTAATTTTCCTACGAAATAGACTTTAATTTATTGACCATACATAGGTTTAAGCATGGCCCAAATTTTAGCAGTCCGCAGATTAGCAGCACTATTGAAAAACACACATCGCTGCCAGTTCCTGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTTAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACG-CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGGTTTGTTACAAAAAAAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGAAGTGTAAGCTGTAACACGCGATAAAATAAATTAGTTTCCAAAGTGTAAAAAAAA] [+] EMBL BM621473 [CCGAAACATTACAAAAATCAATCACAACATTGTGTAATTTTCCTACGAAATAGACTTTAATTTATTGACCATACATAGGTTTAAGCATGGCCCAAATTTTAGCAGTCCGCAGATTAGCAGCACTATTGAAAAACACACATCGCTGCCAGTTCCTGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATATTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTTAGTGTGGCAGTATTTCTCATTTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCAGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAAAACGGTCTACCAACG CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGCTTTGTTACAAAAAAAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGGAGTGT ] [+] EMBL BM654775 [ ccGCCCAAATGATAGCAGTTCGCAGATTAGCAGCGCTATTGATAAACACACATCGCTGCCAGTTCCTGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTTAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACG CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGGTTTGTTACAAAAAAAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGAAGTGTAAGCTGTAACACGCGATAAAATAAATTAGTTTCCAAAGTGT ] [+] EMBL AGA285677 [ ATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTCAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGCTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACGCCTCGATATCGAAAACAGGATGAAAGAGCTGGGCA ] [-] EMBL AGA284371 [ CGTACCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTCAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGCTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACG CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGGTTTGTTACAAAAAAAAAGATGATTTACGTTAAGTGGTTTTGCTATGTACCATAATATCTAGCCTTTTGAAGTGTAAGCTGTAACACGCGTTAAAATAAATTAGTTTCCAAAGTGTAAAAAAAA] consensusID : consensus_9537#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 218 fasta sequence [CGGCTGTTGCGTACCAAAGCGGGCAGCAGCAAGTATGGCGTACTGAGGAGCAATTCAACGCCGCGGTACTACACGTTCCTGGACATTCGTATCGGTTAGGTTTCCCTCTTTTCTGGATGGCTTTTTCACTCCGAATTGGCTGGTGATGCTACTGACTGTGCTGGCCTGCCTACCACCCTCGGTAGAGGGGAACTTCCCCGTTGGGAAATTTCGACGCT] [+] EMBL BX603141 [CGGCTGTTGCGTACCAAAGCGGGCAGCAGCAAGTATGGCGTACTGAGGAGCAATTCAACGCCGCGGTACTACACGTTCCTGGACATTCGTATCGGTTAGGTTTCCCTCTTTTCTGGATGGCTTTTTCACTCCGAATTGGCTGGTGATGCTACTGACTGTGCTGGCCTGCCTACCACCCTCGGTAGAGGGGAACTTCCCCGTTGGGAAATTTCGACGCT] consensusID : consensus_9537#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 126 fasta sequence [TATCTTTTGCTTCGTTAATTTCTTCTTTAGTAATTCTTTATAGAAATCAATATATAGAAGAAGATCATAATATTAATCGGGTTATTTTATTAGTATTAACATTTGTAATATCTATAATAATGCCAA] [+] EMBL BM646624 [TATCTTTTGCTTCGTTAATTTCTTCTTTAGTAATTCTTTATAGAAATCAATATATAGAAGAAGATCATAATATTAATCGGGTTATTTTATTAGTATTAACATTTGTAATATCTATAATAATGCCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9537#1 --------------------------------CCGCCCACGCGTCCGGACAACAGCTTAC 28 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 ATCTGCCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATC 60 consensus_9537#2 ---------------------------CCGAAACATTACAAAAATCAATCACAACATTGT 33 consensus_9537#3 ----------------------CGGCTGTTGCGTACCAAAGCGGGCAG-CAGCAAGTATG 37 consensus_9537#1 GTTCTTTTGGTAGGTGATCGAGAGCCAGTTCACTTGTAGTGGGACTGTTAA--------C 80 consensus_9537#4 ------------------------------------------TATCTTTTG--------C 10 consensus_9537#0 ACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTC 120 consensus_9537#2 GTAATTTTCCTACGAAATAGACTTTAATTTATTGACCATACATAGGTTTAAGCATGGCCC 93 consensus_9537#3 GCGTACTGAGGAGCAATTCAACGCCGCGGTACTACACGTTCCTGGACATTCGTATCGG-T 96 * consensus_9537#1 TTTGTGAAGATATTGTTAACAGTCCATTTTAGTTGATTGAAATGTCTAGCAAATAATTTC 140 consensus_9537#4 TTCGTTAATTTCTTCTT--TAGTAATTCTTTATAGAAATCAATATATAGAAGAAGATCAT 68 consensus_9537#0 TCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCT 180 consensus_9537#2 AAATTTTAGCAGTCCGCAGATTAGCAGCACTATTGAAAAACACACATCGCTGCCAGTTCC 153 consensus_9537#3 TAGGTTTCCCTCTTTTCTGGATGGCTTTTTCACTCCGAATTGGCTGGTGATGCTACTGAC 156 * * consensus_9537#1 GCTAGAGAA-GAGTTAAAAAATCAGTAGGAAC-TGTGTATATTGCGTTATATTGTTAAAT 198 consensus_9537#4 AATATTAATCGGGTTATTTTATTAGTATTAACATTTGTAATATCTATAATAATGCCAA-- 126 consensus_9537#0 TTTTTGCTCCTCGGTACAGGTTTCGTTAGCAC-AACGTGAAACATCTCTTAGAGTCATCG 239 consensus_9537#2 TGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAG 213 consensus_9537#3 TGTGCTGGCCTGCCTACCACCCTCGGTAGAGGGGAACTTCCCCGTTGGGAAATTTCGACG 216 * * * consensus_9537#1 GACACCTCAAGTGTT--TTAAGCGATTGTGTTAGAAGTGCTATAATAAAGTGATTGATTA 256 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 ATGCGCTACGCGACC--TCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGC 297 consensus_9537#2 AAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCAC 273 consensus_9537#3 CT---------------------------------------------------------- 218 consensus_9537#1 AGAATTTGAAAGCCAAACATTTGTTTGAGAAGTGGTGGTCAGAGAC--TTTGAGCAAAAT 314 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 AGTGGCCGGAGCGAAACTGAACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGC 357 consensus_9537#2 AGCG--TAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGT 331 consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 AACATAACAAGCAGAAAAAGCTTTTGTCTTTTTCCATACATCG-ATCAAACCTTTACTGG 373 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 ATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAA-GCGAACGTATTACGGC 416 consensus_9537#2 AAACTTTAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACAT 391 consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 TGTTAACGAAACAACATGTCAGCAACAATTGCGCATACAGATGGCCTCAATAGTAGTGCC 433 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 AGGTGAACGGACAGAGCATCAACATCGATACCAGTTGTCTCGGGTTTTTGCGCCAAAGCA 476 consensus_9537#2 TGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCT 451 consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 AACATTATTTCACCAATCAACATGTTCTACTTCCTGCTTACTCCTGCATTATTGCTGTGG 493 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 TCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATG 536 consensus_9537#2 GATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACGCTCGA-TATCGAAAACA 510 consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 TTTTTCTATTGGCGTTTATCACGACGCCACATGCTAGAACTAGCTGAACGGATACCTGGA 553 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 CTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCAT 596 consensus_9537#2 GGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCC-AACTAGAGCGGTTTGTTACAAAAA 569 consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 CCGAAAGGACTCCCTTTGATTGGAAACGCCTTAGACCTTGTTGGCAGTTCGCACTCCGTG 613 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 TCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAA 656 consensus_9537#2 AAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGAAGTG 629 consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 TTCCGCACAATTATCGAGAAGGGCAAGGAATATAACGAAGTGATTAAAATATGGATAGGA 673 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 CCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGA 716 consensus_9537#2 TAAGCTGTAACACGCGATAAAATAAATTAGTTTCCAAAGTGTAAAAAAAA---------- 679 consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 CCGAAGCTAATCGTCT-------------------------------------------- 689 consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 CCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGG 776 consensus_9537#2 ------------------------------------------------------------ consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 ------------------------------------------------------------ consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 CTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGC 836 consensus_9537#2 ------------------------------------------------------------ consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 ------------------------------------------------------------ consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 TTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAAC 896 consensus_9537#2 ------------------------------------------------------------ consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 ------------------------------------------------------------ consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 CAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAG 956 consensus_9537#2 ------------------------------------------------------------ consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 ------------------------------------------------------------ consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 AAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCCGAGATTCCAACCGAAACGG 1016 consensus_9537#2 ------------------------------------------------------------ consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 ------------------------------------------------------------ consensus_9537#4 ------------------------------------------------------------ consensus_9537#0 AAGTGCCTCCCACTGAAGTGGCTGAACCGGAACCACCTACTCCAGGTGTAGTTTATAGAA 1076 consensus_9537#2 ------------------------------------------------------------ consensus_9537#3 ------------------------------------------------------------ consensus_9537#1 -------- consensus_9537#4 -------- consensus_9537#0 ATGCATTG 1084 consensus_9537#2 -------- consensus_9537#3 -------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||