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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9566#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1329 fasta sequence
[CATGTCAATCAAACTGTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG----TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT-CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCCGGACGCGTGGGCGG]
[-] EMBL BM593428 [CATGTCAATCAAACTGTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTcgg ]
[+] EMBL BM629936 [ TCAAACTGTAAAAGTTGATAAATGTGTTTATGGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAAACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGT ]
[+] EMBL CNS08F84 [ GTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATCCCGGGCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTCCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAAAAAAAACTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTATTTATTGAA ]
[+] EMBL CNS09FVB [ AAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAAAAAAAATGGAGCTCTATTCTTTACTTTATGTTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGAAACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTCCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTTTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG TTTTTTTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGAGGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAA ]
[+] EMBL BX625499 [ TTATTCTGAAAATATAAACGAAGCACGAGGCCCGGGGTACTTACAACGATCTACTAATACGTCTAGAGCTCTATTCTTTACTTTATATTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAATGGAAGACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATCAAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCTATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGAC ]
[-] EMBL BX621214 [ TCAATGGAAGACAGTTTTGTGCAGACATGTGTAAGNATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATAAAGTTAAANCAAAAGATGGACATTAAGCATTCCATTCAATGAGNTACATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTNCTGCANTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGNGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTNCGACCAGTTCAGAACTGAGCCGGAAT ]
[-] EMBL CNS09FVA [ taaaAAAGGAAGAAAGTTTTGTGCAGACATTTGGAAGGATAGAACATCGGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGACAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTAACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTCCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTG TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTGCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGTTTTTATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGC ]
[-] EMBL BX626021 [ AGTTTTGTGCAGACATGTGTAAGGATAGACCATCGGGNTATGACAAAAAGGAGAATNGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATAAAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAATGAGCTACATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTTTGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGACACTTGGGATAG ]
[-] EMBL BX622283 [ CATTCAATGAGCTACATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCGATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTTTGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACANCGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACAC ]
[-] EMBL BX611401 [ TAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCCACTAGGAACATTCCCTCACGCGCTATACGCCCTTAGGGTGTGTAGGATTAAAACAGTAGATAAATATACGCTTCCGACCAGTTCAGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATCGATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCTGAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTTTGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAGCGATGTCTACCCATAGTCATATACTGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGTTGTTGCTAATTGGCCTAACGATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTATGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAACAGGGGGGACACTTGGGATAGAT ]
[-] EMBL BM593362 [ CTCTTCGTTCTGTG TGTGTGTACATTATCATAAAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGACTTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGT CGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCCGGACGCGTGGGCGG]
consensusID : consensus_9566#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1008 fasta sequence
[AACGATGTCTGCCCATAGTCATATACTGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGTTGTTGCTAATTGGCCTAACGATTGAACCTACGACATGTTTTTATTCGACTCGCACGTGTCACACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAAATTCGGACCGAGTTTACACAC-CAACAAGGGGGACACTTGGGATAGATGTTGTAGGGATTCGTGTAGGATGTGTAGGGAAAAAAGTAAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC-TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCCGGGGATCCAGTTGAAGCGGCCAAAGCCGGGCTTTTCGTAGAACGTTACCAGCTCAATGACGGCCGGGAACATCAATCCCAGCGTGCTAAGGCACACCGCCCCGATGAGCGTGATGAACGCGG]
[-] EMBL BM595563 [AACGATGTCTGCCCATAGTCATATACTGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGTTGTTGCTAATTGGCCTAACGATTGAACCTACGACATGTTTTTATTCGACTCGCACGTGTCACACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAAATTCGGACCGAGTTTACACACTCAACAAGGGGGACACTTGGGATAGATGTTGTAGGGATTCGTGTAGGATGTGTAGGGAAAAAAGTAAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATAGATTCAACGTGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGcgg ]
[-] EMBL BM640521 [ c aataggGGGGGACACTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCCGG ]
[-] EMBL BM619050 [ ACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTTGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCACAGGATCCAGTTGAAGCGGCCAAAGCCGGGCTTTTCGTAGAACGTTACCAGCTCAATGACGGCCGGGAACATCAATCCCAGCGTGCTAAGGCACACCGCCCCGATGAGCGTGATGAACGCGG]
[-] EMBL CNS08F83 [ ATAGAAAAATCAATTTTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACCCCCGCGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGC TGCCACGGATCGACGGCTTCTAATGCATCGCGATCACACGCCGATGGT CACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCAAACTCGCCATGCCCCACCCTGTAGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACAATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTCACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGACGAAACC ]
consensusID : consensus_9566#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 622 fasta sequence
[ATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGCTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGGACACTTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTATGGAAAAAGGTAAGGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATC-GACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCACNCTCGTGCGCGATTCTGC]
[-] EMBL BX468827 [ATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGCTGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAGCCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGGACACTTTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTATGGAAAAAGGTAAGGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATC GACGGCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTCAAGACGTCTGCAGTCAGCGCCTCACCACNCTCGTGCGCGATTCTGC]
[-] EMBL BM615419 [ TTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGG TGCTGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTGTCGCACCCAACAACGTAACATCAG CTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATA GGGGGGACAC TTGGGATAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTAAGGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTAAACACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTACTAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATCGGACGcgtgggcgg ]
consensusID : consensus_9566#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 559 fasta sequence
[CCCGAGGTTACTACTAATACGTCTAGAGCTCTATTCTTTACTTTATATTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAACTGGAAGACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGAGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATCAAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCGTATTAGTAGATCGTTGTAAGTACCCCGGGCCTCGTGCTTCGTTTATATTTTCAGAATAATTATCTCAATAAATACATTTATCAACTTTTACAGTTTGACT]
[+] EMBL AL930658 [CCCGAGGTTACTACTAATACGTCTAGAGCTCTATTCTTTACTTTATATTACGCTACGTAGTCATGTGCAAAAACTACCGCTTCAACGCACTCTACTATGTATACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTAAGTGGTGGTATGGTTGTTCGGCTGTTTGATATATTCTTTTTGATACACGTGATACCATTTTCAACTGGAAGACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGAGGGTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCAACAATCTTTCAAATGTTTTGTCAGGTGGATGAAGAAGATCAAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAATGAGCTGCATCTGTAACAGCATCGGTAGTTATTGGTAGCATGCTACTGCACTAGGATTATAATGGCAATCCGTTCATTTCGAGCATCTAGTCGTATTAGTAGATCGTTGTAAGTACCCCGGGCCTCGTGCTTCGTTTATATTTTCAGAATAATTATCTCAATAAATACATTTATCAACTTTTACAGTTTGACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9566#0 CATGTCAATCAAACTGTAAAAGTTGATAAATGTGTTTATTGAGATAATTATTCTGAAAAT 60
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ----------------------------------AACGATGTCTGCCCATAGTCATATAC 26
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 ATAAACGAAGCACGAGGCCCGGGGTACTTACAACGAT-CTACTAATACGTCTAGAGCTCT 119
consensus_9566#3 ----------------------------CCCGAGGTTACTACTAATACGTCTAGAGCTCT 32
consensus_9566#1 TGACTGGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGG-TGT 85
consensus_9566#2 ---------------ATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGCTGC 45
* * **** ** * * * *
consensus_9566#0 ATTCTTTACTTTATGTTACG-------CTACGT---AGTCATGTGCAAAAACTACC--GC 167
consensus_9566#3 ATTCTTTACTTTATATTACG-------CTACGT---AGTCATGTGCAAAAACTACC--GC 80
consensus_9566#1 TGTTGCTAATTGGCCTAACGATTGAACCTACGA------CATGTTTTTATTCGACTC-GC 138
consensus_9566#2 TGTTGCTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGC 105
* ** ** * ** ***** ***** * * ** **
consensus_9566#0 TT-CAACGCACTCTACTATGTA-TACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTA 225
consensus_9566#3 TT-CAACGCACTCTACTATGTA-TACGACCTGCTGATGAACGGCCAGGCCGTATGTCTTA 138
consensus_9566#1 ACGTGTCACACCCAACAACGTAACATCAGC--TTGATTAATTTCCCTACTTCAT-TCTCT 195
consensus_9566#2 ACGTGTCGCACCCAACAACGTAACATCAGCC-TTGATTAATTTCCCTACTTCAT-TCTCT 163
* *** * ** * *** * * * **** ** ** * ** ***
consensus_9566#0 AGTGGTGGTATGGTTGTTCGGCTG---TTTGATATATTCTTTTTGA--TACACGTGATAC 280
consensus_9566#3 AGTGGTGGTATGGTTGTTCGGCTG---TTTGATATATTCTTTTTGA--TACACGTGATAC 193
consensus_9566#1 GTCGCAGACATGGTTCCCGAATCAAATTCGGACCGAGTTTACACA--CCAACAAGGGGGA 253
consensus_9566#2 GTCGCAGACATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAAAAGGGGGGGA 223
* * ****** * ** * * * * *
consensus_9566#0 CATTTTCAA-TGGAAG----ACAGTTTTGTGCAGACATTTGGAAGGATAGAACATCG-GG 334
consensus_9566#3 CATTTTCAACTGGAAG----ACAGTTTTGTGCAGACATGTGTAAGGATAGAACATCGAGG 249
consensus_9566#1 CACTT-GGGATAGATGTTGTAGGGATTCGTGTAGG-ATGTGTAGGGAAAAAA----GTAA 307
consensus_9566#2 CACTTTGGGATAGATGCTGTCGGGATTCGTGTAGG-ATGTGTATGGAAAAAG----GTAA 278
** ** * ** * * ** *** ** ** ** * *** * * *
consensus_9566#0 GTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCA-ACAATCTTTCAAATGTTTTGT 393
consensus_9566#3 GTATGACAAAAAGGAGAATTGTAAAATTTTCTCTCTCA-ACAATCTTTCAAATGTTTTGT 308
consensus_9566#1 GGACACTAAACTGGACAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTA-AA 366
consensus_9566#2 GGACACTAAACTGGACATTTGCAAGGAACTTGGCATGATGCAAGGACGCTCATATTA-AA 337
* * *** *** * *** ** * * * ** * ** **
consensus_9566#0 CAGGTGGATGAAGAAGACA--AAGTTAAAACAAAAGATGGACCTTAAGCATTCCATTCAA 451
consensus_9566#3 CAGGTGGATGAAGAAGATC--AAGTTAAAACAAAAGATGGATCTTAAGCATTCCATTCAA 366
consensus_9566#1 CACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTAC 426
consensus_9566#2 CACATAGAAAAATCAACTCTTAACACAAGGCAACGCACGCGTACGCAGAGCAGGACCTAC 397
** * ** ** * ** ** *** * * ** * *
consensus_9566#0 TGAGCTGCATCTGTAACAGCATCGGTAGTT-ATTGGTAGCATGCTACTGCACTAGGATTA 510
consensus_9566#3 TGAGCTGCATCTGTAACAGCATCGGTAGTT-ATTGGTAGCATGCTACTGCACTAGGATTA 425
consensus_9566#1 TAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTG-ATGAAGACGG 485
consensus_9566#2 TAGCGTGAGTAAACGACGACGTCATTGATTCAACGAGATCCTACAATTG-ATGAAGACGG 456
* ** * ** * ** * ** * * * * * * * ** * * **
consensus_9566#0 TAATG-------GCAATCCGTT--CATTTCGAGCATC-----TAGTCCACTAGGAACATT 556
consensus_9566#3 TAATG-------GCAATCCGTT--CATTTCGAGCATC-----TAGTCGTATTAGTAGATC 471
consensus_9566#1 TAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATCGACG 545
consensus_9566#2 TAAAGCACACCAGAGAGCGGTCGGCAGTTCGGCTGCCACCCATGCTGCCACGGATCGACG 516
*** * * * * ** ** **** * * * *
consensus_9566#0 CCCTCACGCGCGATA-CGCCCTTAGG---GTGTGTAGGATTAAAACAGT-AGATAAA-TA 610
consensus_9566#3 GTTGTAAGTACCCCG-GGCCTCGTGCTTCGTTTATATTTTCAGAATAATTATCTCAA-TA 529
consensus_9566#1 GCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTC 605
consensus_9566#2 GCTTCTAATGCATCGCGATCACACGCCGATGGTGCACTTTCAGTGCGGAAACTCGGGCTC 576
* * * * * * * * *
consensus_9566#0 TACGCTTCCG---ACCAG-TTC-AGAACTGAGCCGGAATGCATTTGCTTACAGTCTAATC 665
consensus_9566#3 AATACATTTA---TCAAC-TTTTACAGTTTGACT-------------------------- 559
consensus_9566#1 AAGACGTCTGCAGTCAGCGCCTCACCATGCCTCTCCA-AACTCGCCATGCCCCACCCTGT 664
consensus_9566#2 AAGACGTCTGCAGTCAGCGCCTCACCACNCTCGTGCGCGATTCTGC-------------- 622
* * * * *
consensus_9566#0 GATAACTCAACATCACAAGTTCCTGTGCGTGTAACACTAGCCACATTACACTAGAAAGCT 725
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 AGTGTGTGCAGTAGTTGGTGGCATCGAGTCGAGAGAGCACGTGTGTTGCACTGCACTACA 724
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 GAAGATTCGTCTGCCACAGGTATGACTCCTCTTCGTTCTGTGTGTGTGTACATTATCATA 785
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ATATCCCGCCACGCCTGAGGAGTTCGACGAAGGGACTAAAGGTGCTGGCAGCTGCCGGTC 784
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 AAAACAGCTCTAATGAAGGAATTCTACATAAACGATGTCTGCCCATAATCATATACTGAC 845
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ACCTTATACTTCCTCCAGATGCTCCGAGAACTCGATAATACTGACGTAGGTGCCGGTGAC 844
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 TTGAACGAATAATTTCTTCCCACGTATGACGTGGCTACGGGTAATTTTGTGGTGCTGTTG 905
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 GAAACCGACCACACCAAACAGAATGAGAAACACGTTCTTCCCGGGGATCCAGTTGAAGCG 904
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 CTAATTGGCCTAACAATTGAACCTACGATTGGGGCATGTTTTTATTCGACTCAGCACGTG 965
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 GCCAAAGCCGGGCTTTTCGTAGAACGTTACCAGCTCAATGACGGCCGGGAACATCAATCC 964
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 TCGCACCCAACAACGTAACATCAGCTTGATTAATTTCCCTACTTCATTCTCTGTCGCAGA 1025
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 CAGCGTGCTAAGGCACACCGCCCCGATGAGCGTGATGAACGCGG---------------- 1008
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 CATGGTTCCCGAATCAGATTCGGACCGAGTTTACACAATCAATAGGGGGGACACTTGGGA 1085
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ------------------------------------------------------------
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 TAGATGCTGTCGGGATTCGTGTAGGATGTGTAGGGAAAAAGGTGAGGACACTAAACTGGA 1145
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ------------------------------------------------------------
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 CAATTGCAAGGAACTTGGCATGATGCAGGGACGCTCATATTAAACACATAGAAAAATCAA 1205
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ------------------------------------------------------------
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 CTCTTAACACAAGGCAACGCACGCGTACGCAGCGCAGGACCTACTAGCGTGAGTAAACGA 1265
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ------------------------------------------------------------
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 CGACGTCATTGATTCAACGAGATCCTACAATTGATGAAGACGGTAAAGCCGGACGCGTGG 1325
consensus_9566#3 ------------------------------------------------------------
consensus_9566#1 ------------------------------------------------------------
consensus_9566#2 ------------------------------------------------------------
consensus_9566#0 GCGG 1329
consensus_9566#3 ----
consensus_9566#1 ----
consensus_9566#2 ----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||