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Anopheles gambiae
cluster # 9567 cluster # 9567       Sequences # 18       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9567#0 length = 1361 sequences # 15  
consensus_9567#1 length = 577 sequences # 2  
consensus_9567#2 length = 519 sequences # 1  

consensusID : consensus_9567#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1361
fasta sequence
                              [CCGCTCTAACCTTCCGAGACTCGTAATCTCGTTTGCTAAATCAACTGTGTGTCGAAGCAGAATCGGTTACCACCGAGCACCAAGCTGGCTGTTTGTTGTTTGCTGGCCACCATCGTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGG-AAAAAAGTACAAGCAC-CAGCCAT-GGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA--TCA--ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATC-GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC-GCTGCCTACC-GCCAGGAAG-CGCACCC-GG-CGGGCACGCATCCGCGCAGCTGCC-GCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTA-CCCGTCGGCC-GGCCCGGCC-GGCCC-GGGCGAACC-GCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTTGTCAACTTTAACCGGAGCTGGGAGAAGTACCGCGACGGGTTCGGCGACATCGGTACCGAGTACTGGCTCGGGCTGGACGAGATCCACCGGCTCACGGTG-GCGGTGCCGCACGAG-ATTGCGTTCGTGGCCGAATCGTTCAAGG-GCGAGCGGCGCTGGGCCCGCTACACCCTGTTCGAGATCGGGGGCGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTGTACTCCGGCACGCTCGGCGACGAGTTCACGTACAATCTGGGCATGCAGTTCTCGACGTACGACCAGGACCACGACCAGTACGGCGATGTGAACTGTGCGCACCGGACGGCGGCCGGCTGGTGGCACCGGAGCTGCACCCGCATCAACCTGAACGGGCTGTACGGGAACGAGTCGGGCGTCCGGTTCGCCTACTGGCCGACTGGCTCCATCTGCAGGGGCTGAAGCGTACCCGCATCATGATACGGGAGATAAAGAAGCGCCGCAAGTAGCCCGCGGGTTTTCGCACTCTCTGCTGGTAGGAAAATAAACTGGTAG]

[+] EMBL BM648887             [CCGCTCTAACCTTCCGAGACTCGTAATCTCGTTTGCTAAATCAACTGTGTGTCGAAGCAGAATCGGTTACCACCGAGCACCAAGCTGGCTGTTTGTTGTTTGCTGGCCACCATCGTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX603448             [                  ACTCGTAATCTCGTTTGCTAAATCAACTGTGTGTCGAAGCAGAATCGGTTACCACCGAGCACCAAGCTGGCTGTTTGTTGTTTGCTGGCCACCATCGTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAAGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX621849             [                        AATCTCGTTTGCTAAATCAACTGTGTGTCGAAGCAGAATCGGTTACCACCGAGCACCAAGCTGGCTGTTTGTTGTTTGCTGGCCACCATCGTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGG AAAAAAGTACAAGCAC CAGCCAT GGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCAGCTGCC GCGAAATCCCGGACGGCATGTCNGGCGAGGAGCTGATCTACCCCGTCGGCC GGCCCGGCC GGNCC GGGCGAACC GCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGNGGCTGGATCGTGATCCAGAACCGGGTCGACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM584379             [                                                 ccgCGAAGCAGAATCGGTTACCACCGAGCACCAAGCTGGCTGTTTGTTGTTTGCTGGCCACCATCGTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGG AAAAAAGTACAAGCAC CAGCCAT GGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCATGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAGCCGCACCC GG CGGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM587544             [                                                                                                       ccGCCACCATCGTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGG AAAAAAGTACAAGCAC CAGCCAT GGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCAGCTGCC GCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTA CCCGTCGGCC GGCCCGGCC GGCCC GGGCGAACC GCTCGAGGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM585630             [                                                                                                          CCGCCATCGTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGGAAAAAAAGTACCCGCAC CAGCCAT GGACGATAGCACGAAAAGCCACCAGATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCTGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCCGGG GGGGCACGCATCCGCGCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX604192             [                                                                                                                  GTCCACGACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGG AAAAAAGTACAAGCAC CAGCCAT GGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX624460             [                                                                                                                                                       CCATTAGGTGGTGGCTGTTGTGAATCTCGAGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGG AAAAAAGTACAAGCACNGAGCCAT GGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCAGCTGCC GCGAAATCNCGGACGGCATGTCGGGCGANGAGCTGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AL934560             [                                                                                                                                                                           gcaccaggGATTG CGAAA CAGCATNGTCGGTTGTGTATCAATACGATTAGTTTGAGG AAAAAAGTACAAGCAC CAGCCATGGGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAATGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM615839             [                                                                                                                                                                                                                                                                                 GCCACCAGATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGTGTTGGGGCCCAGCACGGGCGACAATACCTCCCTGCACGAGCGCTTGACGGAGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAAATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCTGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GGTTGGGCACGCATCCGCGCAGCTGCC GCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTA CCCGTCGGac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX608394             [                                                                                                                                                                                                                                                                                                                                      GCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCA  TCA  ACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCAGCTGCC GCAAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTA CCCGTCGGCC GGCCCGGCC GGCCC GGGCGAACC GCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTTGTCAACTTTAACCGGAGCTGGGAGAAGTACCGCGACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AL934835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tCAGGCAGAATCCCCGAGGTTATTACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATCTGCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACCTGCTGCCTACCTGCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCAGCTGCCTGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTAGCCCGTCGGCCTGGCCCGGCCTGGCCCTGGGCGAACCTGCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTTGTCAACTTTAACCGGAGCTGGGAGAAGTACCGCGACGGGTTCGGCGACATCGGTACCGAGTACTGGCTCGGGCTGGACGAGATCCACCGGCTCACGGTGTGCGGTGCCGCACGAGNATTGCGTTCGTGGCCGAATCGTTCAAGGNGCGAGCGGCGCTGGGCCCGCTACACCCTGTTCGAGATCGGGGGCGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTGTACTCCGGCACGCTCGGCGACGAGTTCACGTACAATCTGGGCATGCAGTTCTCGACGTACGACCAGGACCACGACCAGTACGGCGATGTGAACTGTGCGCACCGGACGGCGGCCGGCTGGTGGCACCGGAGCTGCACCCGCATCAACCTGAACGGGCTGTACGGGAACGAGTCGGGCGTCCGGTT                                                                                                                                  ]
[+] EMBL BX604818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCTCCATCCGGGATC GCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCAGCTGCC GCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTA CCCGTCGGCC GGCCCGGCC GGCCC GGGCGAACC GCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTTGTCAACTTTAACCGGAGCTGGGAGAAGTACCGCGACGGGTTCGGCGACATCGGTACCGAGTACTGGCTCGGGCTGGACGAGATCCACCGGCTCACGGTG GCGGTGCCGCACGAG ATTGCGTTCGTGGCCGAATCGTTCAAGG GCGAGCGGCGCTGGGCCCGCTACACCCTGTTCGAGATCGGGGGCGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTGTACTCCG                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX614603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAACGCTACCGCGCCCTCGACC GCTGCCTACC GCCAGGAAG CGCACCC GG CGGGCACGCATCCGCGCAGCTGCC GCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTA CCCGTCGGCC GGCCCGGCC GGCCC GGGCGAACC GCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTTGTCAACTTTAACCGGAGCTGGGAGAAGTACCGCGACGGGTTCGGCGACATCGGTACCGAGTACTGGCTCGGGCTGGACGAGATCCACCGGCTCACGGTG GCGGTGCCGCACGAG ATTGCGTTCGTGGCCGAATCGTTCAAGG GCGAGCGGCGCTGGGCCCGCTACACCCTGTTCGAGATCGGGGGCGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTGTACTCCGGCACGCTCGGCGACGAGTTCACGTACAATCTGGGCATGCAGTTCTCGACGTACGACCAGGACCACG                                                                                                                                                                                                                                                  ]
[+] EMBL BX618257             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTG GCGGTGCCGCACGAG ATTGCGTTCGTGGCCGAATCGTTCAAGG GCGAGCGGCGCTGGGCCCGCTACACCCTGTTCGAGATCGGGGGCGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTGTACTCCGGCACGCTCGGCGACGAGTTCACGTACAATCTGGGCATGCAGTTCTCGACGTACGACCAGGACCACGACCAGTACGGCGATGTGAACTGTGCGCACCGGACGGCGGCCGGCTGGTGGCACCGGAGCTGCACCCGCATCAACCTGAACGGGCTGTACGGGAACGAGTCGGGCGTCCGGTTCGCCTACTGGCCGACTGGCTCCATCTGCAGGGGCTGAAGCGTACCCGCATCATGATACGGGAGATAAAGAAGCGCCGCAAGTAGCCCGCGGGTTTTCGCACTCTCTGCTGGTAGGAAAATAAACTGGTAG]


>consensus_9567#0 CCGCTCTAACCTTCCGAGACTCGTAATCTCGTTTGCTAAATCAACTGTGTGTCGAAGCAG AATCGGTTACCACCGAGCACCAAGCTGGCTGTTTGTTGTTTGCTGGCCACCATCGTCCAC GACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCG AGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGGAAAAAAGTAC AAGCACCAGCCATGGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGG CCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCC TGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCA AGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACA CTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCATCAACGCAACCAACGC GCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATCGCTCCAACCTC CGGGCAACGCTACCGCGCCCTCGACCGCTGCCTACCGCCAGGAAGCGCACCCGGCGGGCA CGCATCCGCGCAGCTGCCGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTACC CGTCGGCCGGCCCGGCCGGCCCGGGCGAACCGCTCGAGGTGTACTGCGACCAGGACTTCG AGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTTGTCAACTTTAACCGGA GCTGGGAGAAGTACCGCGACGGGTTCGGCGACATCGGTACCGAGTACTGGCTCGGGCTGG ACGAGATCCACCGGCTCACGGTGGCGGTGCCGCACGAGATTGCGTTCGTGGCCGAATCGT TCAAGGGCGAGCGGCGCTGGGCCCGCTACACCCTGTTCGAGATCGGGGGCGAAACGGACC GGTACCGGCTGCAGAAGCTCGGCGTGTACTCCGGCACGCTCGGCGACGAGTTCACGTACA ATCTGGGCATGCAGTTCTCGACGTACGACCAGGACCACGACCAGTACGGCGATGTGAACT GTGCGCACCGGACGGCGGCCGGCTGGTGGCACCGGAGCTGCACCCGCATCAACCTGAACG GGCTGTACGGGAACGAGTCGGGCGTCCGGTTCGCCTACTGGCCGACTGGCTCCATCTGCA GGGGCTGAAGCGTACCCGCATCATGATACGGGAGATAAAGAAGCGCCGCAAGTAGCCCGC GGGTTTTCGCACTCTCTGCTGGTAGGAAAATAAACTGGTAG



consensusID : consensus_9567#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 577
fasta sequence
                              [CCCCGAGGTTCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCATCCATCAACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATCGCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACCGCTGCCTACCGCCAGGAAGCGCACCCGGCGGGCACGCATCCGCGCAGCTGCCGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTACCCGTCGGCCGGCCCGGCCGGCCCGGGCGAACCGCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGAC-GGGTTTGTCAACTTTAA-CCGGAG-CTGGG-AGAAG-TA-CCGCGACGGG--TTC-GGCG-ACA-TCGG-TACCGAGTACTGGCTCGGGCTGGACGAGATCCACCGGCTCACGGTGGCGGTGCCGCACGAAGATTGCGTTCGTGGCCGAATCGTTCAAGGGCCGAGCGGCGCTGGGCCCCGCTACAACCCTGGTTCGAGATCGGGGGCGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTG]

[+] EMBL AL930616             [CCCCGAGGTTCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCATCCATCAACGCAACCAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATCGCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACCGCTGCCTACCGCCAGGAAGCGCACCCGGCGGGCACGCATCCGCGCAGCTGCCGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTACCCGTCGGCCGGCCCGGCCGGCCCGGGCGAACCGCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGAC GGGTTTGTCAACTTTAA CCGGAG CTGGG AGAAG TA CCGCGACGGG  TTC GGCG ACA TCGG TACCGAGTACTGGCTCGGGCTGGACGAGATCCACCGGCTCACGGTGGCGGTGCCGCACGAAGATTGCGTTCGTGGCCGAATCGTTCAAGGGCCGAGCGGCGCTGGGCCCCGCTACAACCCTGGTTCGAGATCGGGGGCGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTG]
[+] EMBL BX619101             [                                                        CAACCAACGCGCCCATGCAACCGTGA CACTCGTTCACTAACTCGCTCCATCCGGGATCGCTCCAACCTCCGGGCAACGCTACCGCGCCCTCGACCGCTGCCTACCGCCAGGAAGCGCACCCGGCGGGCACGCATCCGCGCAGCTGCCGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGATCTACCCGTCGGCCGGCCCGGCCGGCCCGGGCGAACCGCTCGAGGTGTACTGCGACCAGGACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGGNNTGTCNACTTTAACCCGGAGCCTGGGAAGAAGTTANCCGCGACGGGGTTTCGGGCGAACATTCGGTTACCcgaagtta                                                                                                                                                                  ]


>consensus_9567#1 CCCCGAGGTTCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCATCCATCAACGCAAC CAACGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGGATCGCTCC AACCTCCGGGCAACGCTACCGCGCCCTCGACCGCTGCCTACCGCCAGGAAGCGCACCCGG CGGGCACGCATCCGCGCAGCTGCCGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGA TCTACCCGTCGGCCGGCCCGGCCGGCCCGGGCGAACCGCTCGAGGTGTACTGCGACCAGG ACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTTGTCAACTTTA ACCGGAGCTGGGAGAAGTACCGCGACGGGTTCGGCGACATCGGTACCGAGTACTGGCTCG GGCTGGACGAGATCCACCGGCTCACGGTGGCGGTGCCGCACGAAGATTGCGTTCGTGGCC GAATCGTTCAAGGGCCGAGCGGCGCTGGGCCCCGCTACAACCCTGGTTCGAGATCGGGGG CGAAACGGACCGGTACCGGCTGCAGAAGCTCGGCGTG



consensusID : consensus_9567#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 519
fasta sequence
                              [CGCACGAGGNGCAAGTGCGAAACAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGGAAAAAAGTACAAGCACCAGCCATGGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGAGCTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCATCAACGCAAGCCAAGCGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCGTCCATCCGGGATCGCTCCAAGCCTCCGGGCAACGCTACCGGACCCTCGANCGCGTGCCTACCGACAGGAAGCGCGACCCGGCGGGCACGCATCCGCGCNAGGCTGACG]

[+] EMBL BX469423             [CGCACGAGGNGCAAGTGCGAAACAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGGAAAAAAGTACAAGCACCAGCCATGGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGAGCTCCTGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCATCAACGCAAGCCAAGCGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCGTCCATCCGGGATCGCTCCAAGCCTCCGGGCAACGCTACCGGACCCTCGANCGCGTGCCTACCGACAGGAAGCGCGACCCGGCGGGCACGCATCCGCGCNAGGCTGACG]


>consensus_9567#2 CGCACGAGGNGCAAGTGCGAAACAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAG GAAAAAAGTACAAGCACCAGCCATGGACGATAGCACGAAAAGCCACCAAATGCTGCTGCT AATACTGTTGGCCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGA CAATACCTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGA GGAGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGAGCTCC TGCAGCAAGACACTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCATCAA CGCAAGCCAAGCGCGCCCATGCAACCGTGACCACTCGTTCACTAACTCGCGTCCATCCGG GATCGCTCCAAGCCTCCGGGCAACGCTACCGGACCCTCGANCGCGTGCCTACCGACAGGA AGCGCGACCCGGCGGGCACGCATCCGCGCNAGGCTGACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9567#0      CCGCTCTAACCTTCCGAGACTCGTAATCTCGTTTGCTAAATCAACTGTGTGTCGAAGCAG 60
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      AATCGGTTACCACCGAGCACCAAGCTGGCTGTTTGTTGTTTGCTGGCCACCATCGTCCAC 120
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      GACAAGAGTCGTCTGTATTTTAGCCGTCGCACCATTAGGTGGTGGCTGTTGTGAATCTCG 180
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      AGTGCCGAAACCAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGGAAAAAAGTAC 240
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      AAGCACCAGCCATGGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGG 300
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      CCGCGTTGGTGGGCCCATCGGCTGCAGCGTTGGCGCCCAGCACGCGCGACAATACCTCCC 360
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      TGCACGAGCGCTTGACGGCGCTCGAGAGCACCATAACGTCCCGAGATGAGGAGCTCGCCA 420
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      AGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGACTCCTGCAGCAAGACA 480
consensus_9567#1      --------------------------------------------------CCCCGAGG-- 8
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      CTCCCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCAACCATCAACGCAACCAACGC 540
consensus_9567#1      --TTCAAAGCGTTCTGCGCAACGGACGGCACGCAGCATCATCCATCAACGCAACCAACGC 66
consensus_9567#2      ----------------------------------------------CGCACGAGGNGCAA 14
                                                                      * * *    *  

consensus_9567#0      GCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGG---ATCGCTCCAAC 597
consensus_9567#1      GCCCATGCAACCGTGACCACTCGTTCACTAACTCGCTCCATCCGGG---ATCGCTCCAAC 123
consensus_9567#2      GTGCGAAACAGCATGGTCGGTTGTGTATCAAGACGATTAGTTTGAGGAAAAAAGTACAAG 74
                      *  *     * * **  *  * **  *  **  ** *   *  * *   *    * *** 

consensus_9567#0      CTCCGGGCAACG-CTACCGCGCCCTCGACCGCTGCCTACCGCCAGGAAGCGCACCCGGCG 656
consensus_9567#1      CTCCGGGCAACG-CTACCGCGCCCTCGACCGCTGCCTACCGCCAGGAAGCGCACCCGGCG 182
consensus_9567#2      CACCAGCCATGGACGATAGCACGAAAAGCCACCAAATGCTGCTGCTAATACTGTTGGCCG 134
                      * ** * **  * * *  ** *      ** *    * * **    **        * **

consensus_9567#0      GGCACGCATCCGCG-CAGCTGCCGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGAT 715
consensus_9567#1      GGCACGCATCCGCG-CAGCTGCCGCGAAATCCCGGACGGCATGTCGGGCGAGGAGCTGAT 241
consensus_9567#2      CGTTGGTGGGCCCATCGGCTGCAGCG--TTGGCGCCCAGCACGCGCGACAAT------AC 186
                       *   *    * *  * ***** ***   *  **  * *** *   * * *       * 

consensus_9567#0      CTACCCGTCGGCCGGCCCGGCCG-GCCCGGGCGAACCGCTCGAGGTGTACTGCGACCAGG 774
consensus_9567#1      CTACCCGTCGGCCGGCCCGGCCG-GCCCGGGCGAACCGCTCGAGGTGTACTGCGACCAGG 300
consensus_9567#2      CTCCCTGCACGAGCGCTTGACGGCGCTCGAGAGCACCAT----AACGTCCCGAGATGAGG 242
                      ** ** *   *   **  * * * ** ** * * ***         ** * * **  ***

consensus_9567#0      ACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTT--GTCAACTT 832
consensus_9567#1      ACTTCGAGGACGGCGGCTGGATCGTGATCCAGAACCGGTTCGACGGGTTT--GTCAACTT 358
consensus_9567#2      AGCTCGCCAAGATGCTGCAGCTGCTGCTCACCAATCAGCGCGAAATACTCCGAGCTCCTG 302
                      *  ***   *         * *  ** **   ** * *  ***     *     *  ** 

consensus_9567#0      TAACCGGAGCTGGGAGAAGTACCGCGACGGGTTCGGCGACAT-CGGTACCGAGTACTGGC 891
consensus_9567#1      TAACCGGAGCTGGGAGAAGTACCGCGACGGGTTCGGCGACAT-CGGTACCGAGTACTGGC 417
consensus_9567#2      CAGCAAGACACTCCCAAAGCGTTCTG-CGCAACGGACGGCACGCAGCATCAACCATCAAC 361
                       * *  **        ***      * **     * ** **  * * * * *  *    *

consensus_9567#0      TCGGGCTGGACGAGATCCACCGGCTCACGGTGGCGGTGCCGCACGA-GATTGCGTTCGTG 950
consensus_9567#1      TCGGGCTGGACGAGATCCACCGGCTCACGGTGGCGGTGCCGCACGAAGATTGCGTTCGTG 477
consensus_9567#2      GCAAGCCAAGCGCG-CCCATGCAACCGTGAC--CACTCGTTCACTA-ACTCGCGTCCATC 417
                       *  **    ** *  ***      *  *    *  *    *** *   * **** * * 

consensus_9567#0      GCCGAATCGTTCAAGGGC---GAGCGGCGCTG--GGCCC-GCTACACCCT--GTTCGAGA 1002
consensus_9567#1      GCCGAATCGTTCAAGGGCC--GAGCGGCGCTG--GGCCCCGCTACAACCCTGGTTCGAGA 533
consensus_9567#2      -CGGGATCGCTCCAAGCCTCCGGGCAACGCTACCGGACCCTCGANCGCGT-GCCTACCGA 475
                       * * **** ** * * *   * **  ****   ** **  * *   *      *   **

consensus_9567#0      TCGGGGGCGAAACG-GACCGGTAC-CGGCTGCAGAAGCTCGGCGTGTACTCCGGCACGCT 1060
consensus_9567#1      TCGGGGGCGAAACG-GACCGGTAC-CGGCTGCAGAAGCTCGGCGTG-------------- 577
consensus_9567#2      CAGGAAGCGCGACCCGGCGGGCACGCATCCGCGCNAGGCTGACG---------------- 519
                        **  ***  **  * * ** ** *  * **   **   * **                

consensus_9567#0      CGGCGACGAGTTCACGTACAATCTGGGCATGCAGTTCTCGACGTACGACCAGGACCACGA 1120
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      CCAGTACGGCGATGTGAACTGTGCGCACCGGACGGCGGCCGGCTGGTGGCACCGGAGCTG 1180
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      CACCCGCATCAACCTGAACGGGCTGTACGGGAACGAGTCGGGCGTCCGGTTCGCCTACTG 1240
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      GCCGACTGGCTCCATCTGCAGGGGCTGAAGCGTACCCGCATCATGATACGGGAGATAAAG 1300
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      AAGCGCCGCAAGTAGCCCGCGGGTTTTCGCACTCTCTGCTGGTAGGAAAATAAACTGGTA 1360
consensus_9567#1      ------------------------------------------------------------
consensus_9567#2      ------------------------------------------------------------
                                                                                  

consensus_9567#0      G 1361
consensus_9567#1      -
consensus_9567#2      -
                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)