These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9580#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1468 fasta sequence [AAAAAATTAAAAGCAAAATGTAAACAAAACGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG-----AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG-AAACTG-G-TTGTGCG-AAAG-GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG-ACGCTTCACTAGTGGTGTAATAGCGCT-GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG-GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA-CGGGCCACCATCAGTCACATAGGTTC-GGAAAAGATCGGCCGTTTGCTG-GCCGCAATACAGGCG-TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG-TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC-GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT-CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT-CGAGGTTGCCGCGTCCAACCCCTGTGACGG-ACGCAAAAGTGAAATTGAGTTGTAATTTAAACAGTTCGTTCATGCATTTGTTACAAGGTTCGCGCAGTTTGCCATGCCGACAATGTTTCGCGCGCGCATTGCATTCAGTTAAAAATAGAAACTCCGGTGAGAAACAGAAATAAAGTGCCGGTAAGCGCCCGTGT] [+] EMBL CNS09CXH [AAAAAATTAAAAGCAAAATGTAAACAAAACGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCGTTCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGC ] [+] EMBL CNS08T5M [ AAACGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCGAGGTAAGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGAAA AAAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGGAGATTCGCTGCTTAAAAAGGACTGGA ] [+] EMBL CNS09B1X [ aattCGCAGAACGGAAAATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAATTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACACTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGA ] [+] EMBL CNS08ETZ [ caAACGGAAAATTAC AAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACC ] [+] EMBL BX603214 [ GGAAAATTACAAAACATAAACCGAAAAATACACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATTTAAACGGTGTGGTGAATCTGTACAAACCAGCCGGAGTAACGGTGCAGCAAGTTCGGAACACCATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAGCGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTAACGGGGCCTCGCTACCAGCCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGAACGAACCTTGCCTTCCGACTGCAACAGAACCGTCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGC ] [+] EMBL CNS08HGC [ ATTACAAAACATAAACCAAAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCGAGGTAAGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACAC ] [+] EMBL BX619527 [ TGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATTTAAACGGTGTGGTGAATCTGTACAAACCAGCCGGAGTAACGGTGCAGCAAGTTCGGAACACCATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAGCGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTAACGGGGCCTCGCTACCAGCCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGAACGAACCTTGCCTTCCGACTGCAACAGAACCGTCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTNC GGAAAAGATCGGCCGTTGGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACGTACAGTCGCAGGCCGNCTACGAGCTAGCGTGCA ] [+] EMBL BX624803 [ CATGGCACTGAAATTAGTCAAGGACGCTCCAACGGTATGGAACTATTTAAACGGTGTGGTGAATCTGTACAAACCAGCCGGAGTAACGGTGCAGCAAGTTCGGAACACCATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAGCGTGTCGTTATTGAAAACAATCTCGATGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTAACGGGGCCTCGCTACCAGCCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGAACGAACCTTGCCTTCCGACTGCAACAGAACCGTCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCACCGGGCCACCATCAGTCACATAGGTTCNGGAAAAGATCGGCCGTTTGCTG GCCGCAA ] [+] EMBL CNS09323 [ ACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGAGTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCG AGATTTAAACCAACTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGACGCG AAACTG G TTGTGCG AAAG GTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAG ] [+] EMBL CNS08PKU [ CGATGCGCAAACTGCGCTTGTGCGCAAAGCGTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAACCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGGCACGCTTCACTAGTGGTGTAATAGCGCTGGGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGA CGGATTCCTGGGAAAGCGCCACGGAGACACACTTTGCCGATTCGCGAGTTACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTGCGCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACG ] [-] EMBL CNS09B1Y [ GAAGATATCAAGTGTCGATTTTGCGCTAATCATGG ACGCTTCACTAGTGGTGTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCCACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAAACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATAAACTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGGACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTTCCTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGATACGAGGTTGCCGCGTCCAACCCCTGTGACGG CACAAAA ] [-] EMBL CNS09324 [ GTAATAGCGCT GGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTGCGGGTGTACCGGGTGACCGGATTCCTGGGAAAG GCCACGGAGACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATCAGTCACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTC CTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CCAGct ] [-] EMBL CNS08T5N [ CGGGTGACCGGATTCCTGGGAAAG GCCACGGAAACACACTTTGCCGATTCGCGAGTAACGGCA CGGGCCACCATAAGTTACATAGGTTC GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TTACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAGTTTTTGGAAACCTTTTTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGGACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCTGTGACGG ACGCAAAAGTTAA ] [-] EMBL CNS08EU0 [ GGAAAAGATCGGCCGTTTGCTG GCCGCAAAACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATAC GGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGAACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCTGTGACGGCACGCAAAGTTGGCATTGAGTTGTAATTTAAACAGTTCGTTCATGCATTTGTTACAAGGTTCGCGCAGTTTGCCATGCCGACAATGTTTCGCGCGCGCATTGCATTCAGTTAAAAATAGAAACTCCGGTGAGAAACAGAAATAAAGTGCCGGTAAGCGCCCGTGT] [-] EMBL CNS09CXI [ GAAAAGATCGGCCGTTTGCTG GCCGCAATACAGGCG TCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAGTCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTACCAATGATATACGGCATACGGCTGGCAGAG TATCGGAAACCTTTCTTTACCATCGAAATTCACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAACCTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATACGGGCACGGCCATTTTCTGCTGGAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAAGGAATGGAAGAGTAGCCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCTGTGACGA ACGCAAAAaaaaaaaa ] [-] EMBL CNS08PKV [ gaACACACTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT TTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCACGTGCAATAAATGAT CGAGGTTGCCGCGTCCAACCCCT ] [-] EMBL CNS08HGD [ CTGCACACCATTTTTGCAACTAGAAAGTTAATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTT CTTTTACATGTGTTCATTGTTTATGATCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTG ] consensusID : consensus_9580#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 243 fasta sequence [GGTGTAATAGTGCTGGAAGAATCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCATCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCCTTGCAAGGAATGGAAGAGTAGGCCCAGACAGCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACACCACACACTGCACACCATTTGTGT] [+] EMBL BX607888 [GGTGTAATAGTGCTGGAAGAATCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCATCAGCGGCATGGCACACACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCCTTGCAAGGAATGGAAGAGTAGGCCCAGACAGCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGAACTGTGGGCGTAACACCCACGACACCACACACTGCACACCATTTGTGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9580#0 AAAAAATTAAAAGCAAAATGTAAACAAAACGCAGAACGGAAAATTACAAAACATAAACCA 60 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 AAAAATATACTGCACTACTCTCTGTAAAACTCAATTTCCATGGCACTGAAATTAGTCAAG 120 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 GACGCTCCAACGGTATGGAACTATCTAAATGGTGTGGTGAATCTGTACAAACCCGCCGGA 180 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 GTAACGGTGCAGCAAGTTCGGAACACAATCATTCACAACTTATGCCGAGATTTAAACCAA 240 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CTCGAAGTGAGACCTTCGCTTCAACGTGTCGTTATTGAAAACAATCTCGATGCGAAACTG 300 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 GTTGTGCGAAAGGTGGAAGACCTTTCCGACAACGTGCTGGTCACGGGGCCACGCTACCAA 360 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CCGGAAGATATCAAGTGTCGATTTTGCGCTAATCATGGACGCTTCACTAGTGGTGTAATA 420 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 GCGCTGGGCATCAATAATGGCACAAACCTCGCCTTCCGACTGCAACAGAACCGGCCGCTG 480 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CGGGTGTACCGGGTGACCGGATTCCTGGGAAAGGCCACGGAGACACACTTTGCCGATTCG 540 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CGAGTAACGGCACGGGCCACCATCAGTCACATAGGTTCGGAAAAGATCGGCCGTTTGCTG 600 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 GCCGCAATACAGGCGTCACATCAGCGCAAAATGTTCGAGCTGAGCGGTATCGACATACAG 660 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 TCGCAGGCCGCCTACGAGCTAGCGTGCAAAGGAACGATACGACCGGCGGACAATCGGCTA 720 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CCAATGATATACGGCATACGGCTGGCAGAGTATCGGAAACCTTTCTTTACCATCGAAATT 780 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CACGCAATCAACGAGACGGAAGCGTACCTCGGCGAACTCATCCACGAGATTGGCATCAAC 840 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CTGAAATCGTGTGCACATTGCACCGGTGTACGCTGTATACGGCACGGCCATTTTCTGCTG 900 consensus_9580#1 ---------------------------------------------GGTGTAATAGTGCTG 15 ** * ***** consensus_9580#0 GAAGATTCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCCTCAGCGGCATGGCACAC 960 consensus_9580#1 GAAGAATCGCTGCTTAAAAAGGACTGGAACCTGCAAAACATCATCAGCGGCATGGCACAC 75 ***** ************************************ ***************** consensus_9580#0 ACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCGTTGCAA 1020 consensus_9580#1 ACGAACAAGCTCGTAAATCAGCATCCAGACATGTTGCAGCAAAGTAGCTCATCCTTGCAA 135 ***************************************************** ****** consensus_9580#0 GGAATGGAAGAGTAG-CCCAGACACCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGA 1079 consensus_9580#1 GGAATGGAAGAGTAGGCCCAGACAGCGATCGATAAGTGGTCGAGAACAAAGTCAGCGCGA 195 *************** ******** *********************************** consensus_9580#0 ACTGTGGGCGTAACACCCACGACAGCACACACTGCACACCATTTTTGCAACTAGAAAGTT 1139 consensus_9580#1 ACTGTGGGCGTAACACCCACGACACCACACACTGCACACCATTTGTGT------------ 243 ************************ ******************* ** consensus_9580#0 AATGGTAGCTCAAGGAAAGTGTGAGAACAAGTTTCTTTTACATGTGTTCATTGTTTATGA 1199 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 TCCTCTCTCTCTGTAGCATGGCCTTATTGGCTTGCGTCTGGAGCAAGTTGAAAATTGTCA 1259 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 CGTGCAATAAATGATCGAGGTTGCCGCGTCCAACCCCTGTGACGGACGCAAAAGTGAAAT 1319 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 TGAGTTGTAATTTAAACAGTTCGTTCATGCATTTGTTACAAGGTTCGCGCAGTTTGCCAT 1379 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 GCCGACAATGTTTCGCGCGCGCATTGCATTCAGTTAAAAATAGAAACTCCGGTGAGAAAC 1439 consensus_9580#1 ------------------------------------------------------------ consensus_9580#0 AGAAATAAAGTGCCGGTAAGCGCCCGTGT 1468 consensus_9580#1 ----------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||