These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9581#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2006 fasta sequence [TCAGGCAGAATNGGCCCGAGGGNCTATAACGGCATGACAACAACGATCAAACTACGAGATGTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGCGACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGCGTCCACATCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAGAGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATCCGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGCTGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGGCGGGTGGAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC--AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC------CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATTTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT-CCCCGATGATTTGTGCCT--TGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCGTTTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAACAAAAAAAAAACAAACAAAATACAATACATTCTTTCAGCTCAAATAGTATCCATCTTCCACCATTTCCTGTATTCGATCTAATACCGCTGGAGATAAGAGCGTGTAAAGTTAACACAATGTTTAGAAAAGAAAACTCCCACAAGCATATGTTGTCTGCGATTCATGTTTCTACTTAAGTGGGTTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTAAGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTACTATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAAATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAATAAACAGTCTGCTACAATGTGCANGTAAAAAAAA] [+] EMBL BX466317 [TCAGGCAGAATNGGCCCGAGGGNCTATAACGGCATGACAACAACGATCAAACTACGAGATGTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGCGACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGCGTCCACATCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAGAGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATCCGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGA ] [+] EMBL BM630437 [ ccgACGAGATGTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGCGACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGC TCCACATCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAGAGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATCCGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGCTGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGGCGGGTGGAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTATGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAA ] [+] EMBL BM605559 [ ccGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGCTGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGGCGGGTGGGGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATATGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTATCGATCGTTGCGATCGCGAC AAAAA ] [+] EMBL BX607382 [ GAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAAAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAATGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATTTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT CCCCGATGATTTGTGCCTTGTGTGTGTGTGTTGACTTAAGAT ] [+] EMBL BM637586 [ cCGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATATGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAG ] [+] EMBL BX621954 [ ttcgATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATATGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTATCGATCGTTGCGATCGCGACAAAAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATCCTCTCTCTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTGTGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATCTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT CCCCGATGATTTGTGCCT TGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCT ] [+] EMBL BX620973 [ ATTATGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTANNGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTGTGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATTTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACTCCCCCGATGATT ] [+] EMBL AGA284962 [ GTCCGGCAAGGTGTGGCGAGTGTTGCCCAAATGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGT ] [+] EMBL BX618642 [ CTACAAACGCACGGTGCCGTACCGCAAGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTCGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCATGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTAC ] [+] EMBL BX623003 [ TATCGATCGTTGCGATCGCGACAAAAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATCCTCTCTCTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTGTGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATCTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT CCCCGATGATTTGTGCCT TGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCGTTTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATG ] [+] EMBL BX612567 [ GTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCGTTTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAACAAAAAAAAAACAAACAAAATACAATACATTCTTTCAGCTCAAATAGTATCCATCTTCCACCATTTCCGGTATTCGAT ] [-] EMBL CNS09JT4 [ atcCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCG TTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGACGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAAC AAAAAAACAAACAAAATACAATACATTC ] [+] EMBL BX613006 [ GCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCG TTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAACAAAAAAAAAACAAACAAAATACAATACATTCTTTCAGCTCAAATAGTATCCATCTTCCACCATTTCCTGTATTCGATCTAATACCGCTGGAGATAAGAGCGTGTAAAGTTAACACAATGTTTAGAAAAGAAAACTCCCACAAGCATATGTTGTCTGCGATTCATGTTTCTACTTAAGTGGGTTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTAAGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTACTATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAAATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAATAAACAGTCT ] [-] EMBL AGA283673 [ CAAATAGTATCCATCTTCCACCATTTCCTGTATTCGATCTAATACCGCTGGAGATAAGAGCGTGTAAAGTTAACACAATGTTTAGAAAAGAAAACTCCCACAAGCATATGTTGTCTGCGATTCATGTTTCTACTTAAGTGGGTTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTAAGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTACTATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAAATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAATAAACAGTCTGCTACAATGTGCANGTAAAAAAAA] consensusID : consensus_9581#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 715 fasta sequence [CTACGCGCTCCCCTGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTTGACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCACCAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATACTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGGCGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAG-CAGAAGGGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTCCGAGTGTCCGGCCGAGGCCGAATCGGTGCTGATGGTTTGGCCTTCTGGTACACCCGCTGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGGCATCTTCTTCGACTCGTTCGATAACGACAACAAACACAACAATCCCTACATTTCGGCCGTGCTAAACGACGGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACTCAGCTCCTGTCTGGCTGTTTGCGCGATTTCCGAAACAAACCCTTCCCAACACGGGCAAAGATCGAATACTACAACAACATTCTGACCGTCCTGTTCCACAACGGCATGACCAACAACGATCAAAACTACGAGATGTGCT] [+] EMBL CNS09JT3 [CTACGCGCTCCCCTGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTTGACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCACCAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATACTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGGCGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAG CAGAAGGGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTCCGAGTGTCCGGCCGAGGCCGAATCGGTGCTGATGGTTTGGCCTTCTGGTACACCCGCTGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGGCATCTTCTTCGACTCGTTCGATAACGACAACAAACACAACAATCCCTACATTTCGGCCGTGCTAAACGACGGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACT ] [+] EMBL BM580601 [ CCGGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTTGACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCACCAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATACTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGGCGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAGCCAGAAGGGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTCCGAGTGTCCGGCCGTGGCCGAATCGGTGCTGATGGTTTGGCCTTCTGGTACA CTGCTGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGGCATCTTCTTCGACTCGTTCGATAACGACAACAAACACAACAATCCCTACATTTCGGCCGTGCTAAACGACGGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACTCAGCTCCTGTCTGGCTGTTTGCGCGATTTCCGAAACAAACCCTTCCCAACACGGGCAAAGATCGAATACTACAACAACATTCTGACCGTCCTGTTCCACAACGGCATGACCAACAACGATCAAAACTACGAGATGTGCT] consensusID : consensus_9581#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence [GCAGAATCGCCACGAGGTTGAAAAAAGGCACATTTATTTCCAACTGTGAGTGAATATGTTTTATTACCAATATGCTCACTCCCCGATGATTTGTGCCTTGTGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAAGTTTTGATGTGTTTTTGCGCTGTCAAGTGGTTGTGTCTCGTTTGNTGCTTTCCTATCTTTTACACGGAGAAGAGTGCGTGCGTTTAGCCGTATTGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGANNGTGTTGTGAAATTTAACTGCTTGGTGGGACGGCATAGGTAGTCACGTTCTGATCAATGAAAACGAACTGTTCTCGATCGGGCAAAACAAAGACGAAACACAGACCAAAGAGTACAATACATTGCTTNTGCAGCGTCAAAGTAGTATCCATCTTCCACCATTTCCTGTATTCGGATCTAATACCAGCTGGAAGATAAGAGGCGTGTAACAGGTTAACANAATTGTTTAGAAGACAGAGAGAANCTCCCACGAAAGCATATGTTGCTTATCGAATNGNCAGTGTTTNCGNACGTNTAAGGTGGGCTTGTANNAGACAGCTCGTATTAAGAATGCAG] [+] EMBL BX469512 [GCAGAATCGCCACGAGGTTGAAAAAAGGCACATTTATTTCCAACTGTGAGTGAATATGTTTTATTACCAATATGCTCACTCCCCGATGATTTGTGCCTTGTGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAAGTTTTGATGTGTTTTTGCGCTGTCAAGTGGTTGTGTCTCGTTTGNTGCTTTCCTATCTTTTACACGGAGAAGAGTGCGTGCGTTTAGCCGTATTGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGANNGTGTTGTGAAATTTAACTGCTTGGTGGGACGGCATAGGTAGTCACGTTCTGATCAATGAAAACGAACTGTTCTCGATCGGGCAAAACAAAGACGAAACACAGACCAAAGAGTACAATACATTGCTTNTGCAGCGTCAAAGTAGTATCCATCTTCCACCATTTCCTGTATTCGGATCTAATACCAGCTGGAAGATAAGAGGCGTGTAACAGGTTAACANAATTGTTTAGAAGACAGAGAGAANCTCCCACGAAAGCATATGTTGCTTATCGAATNGNCAGTGTTTNCGNACGTNTAAGGTGGGCTTGTANNAGACAGCTCGTATTAAGAATGCAG] consensusID : consensus_9581#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 294 fasta sequence [GGCTCGACTCAGCTCCTGTCTGGATGTTTGCTGCGATTTCGAAACAAACCTTCCCAACACGGGCAAAGATCGAACTACTACAACAACATTCTGACCGTCCTGTTCCACAAGCAGGGATGAGCAACAACGAGTCAATAGACTAACNAGATGTGCTTCCNGGGACGAGTAGTAANTGTCGGGTGCTAACCAGATGTACGGTGGNTACNTATNTGACCTGCTACTTGGGCCATGCNCGTTGGGNCTGACCGGTGGACTGACCGAGATGATCACAATNNTGCTTCACACATTCTCTCA] [+] EMBL AL695740 [GGCTCGACTCAGCTCCTGTCTGGATGTTTGCTGCGATTTCGAAACAAACCTTCCCAACACGGGCAAAGATCGAACTACTACAACAACATTCTGACCGTCCTGTTCCACAAGCAGGGATGAGCAACAACGAGTCAATAGACTAACNAGATGTGCTTCCNGGGACGAGTAGTAANTGTCGGGTGCTAACCAGATGTACGGTGGNTACNTATNTGACCTGCTACTTGGGCCATGCNCGTTGGGNCTGACCGGTGGACTGACCGAGATGATCACAATNNTGCTTCACACATTCTCTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TCAGGCAGAATNGGCCCGAGGGNCTATAACGGCATGACAACAACGATCAAACTACGAGAT 60 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 GTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGC 120 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 GACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGCGTCCACA 180 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAG 240 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 AGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATC 300 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 CGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGC 360 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 GCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGC 420 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGG 480 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 CGGGTGGAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGG 540 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 CCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAA 600 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACA 660 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 GTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATG 720 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGA 780 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 GTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGT 840 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 GTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGC 900 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTT 960 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 ATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGACAAAAAAACGGAGATAGACT 1020 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACC 1080 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 CCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATCCTCTCTCTCTCTCTTCC 1140 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ----------CTACGCGCTCCCCTGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTT 50 consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 AGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGC 1200 consensus_9581#2 ----------------------------------------------------GCAGAATC 8 consensus_9581#1 GACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCAC 110 consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 ACCACAGCATAGAAAAAAGGCACATTTATTTCCAA-TGTGA-GTGAATATGTTTTATTAC 1258 consensus_9581#2 GCCACGAGGTTGAAAAAAGGCACATTTATTTCCAACTGTGA-GTGAATATGTTTTATTAC 67 consensus_9581#1 CAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATA 170 consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 CAATATGC--TCACTCCCCGATGATTTGTGCCTTGTGTGTGTGT----TGACTTAAGATG 1312 consensus_9581#2 CAATATGC--TCACTCCCCGATGATTTGTGCCTTGTGTGTGTGTG--TTGACTTAAGATG 123 consensus_9581#1 CTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGG 230 consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 AGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAA-TTTTGATGTGTTTT 1371 consensus_9581#2 AGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAAGTTTTGATGTGTTTT 183 consensus_9581#1 CGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAGCAGAAG 290 consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TGC--TGTCAA-TGGTTGTGTCTCGTTT----TTTTTTTCTTTTTTACACGAG--AGAGT 1422 consensus_9581#2 TGCGCTGTCAAGTGGTTGTGTCTCGTTTGNTGCTTTCCTATCTTTTACACGGAGAAGAGT 243 consensus_9581#1 GGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTC 350 consensus_9581#3 ------GGCTCGACTCAGCTCCTGTCTGGATGT--TTGCTGCGATTTCGAAACAAACCTT 52 consensus_9581#0 GC-TGC-TTTAGCTAT----GAAGAGAGATCAC--CTATTTCGGTGTTGTGTTTGAGTGT 1474 consensus_9581#2 GCGTGCGTTTAGCCGTA-TTGAAGAGAGATCAC--CTATTTCGGTGTTGTGTTTGANNGT 300 * * * * * * * * consensus_9581#1 CGAGTGTCCGGCCGAGGCCGAATCGGTGC--TGATGGTTTGGCC-TTCTGGTACACCCGC 407 consensus_9581#3 CCCAACACGGGCAAAGATCGAACTACTACAACAACATTCTGACCGTCCTGTTCCACAAGC 112 consensus_9581#0 --TGTGAAATTTAACTGCT-GGTGGG-ATGGCATAGGTA-TCACGTTCTGATCAATGAAA 1529 consensus_9581#2 GTTGTGAAATTTAACTGCTTGGTGGG-ACGGCATAGGTAGTCACGTTCTGATCAATGAAA 359 * * * *** * * consensus_9581#1 TGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGG 467 consensus_9581#3 AGGGATGAGCAACAA-CGAGTCAATAGACTAACNAGATGTGCTTCCNGGGACGAGTAGTA 171 consensus_9581#0 ACGAACTGTTT--GAT--GGGCAAAACAAAAA--AAAAACAAACAAAA-----TACAATA 1578 consensus_9581#2 ACGAACTGTTCTCGATC-GGGCAAAACAAAGACGAAACACAGACCAAAGA--GTACAATA 416 * * * * * consensus_9581#1 CATCTTCTTCGACTCGTTCGATA-ACGACAACAAACACAACAATCCCTACATTTCGGCC- 525 consensus_9581#3 ANTGTCGGGTG-CTAACCAGATGTACGGTGGNTA-CNTATNTGACCTGCTACTTGGGCC- 228 consensus_9581#0 CATTCTTTCAGC----TCAAA-TAGTATCCATCT-TCCACCATTTCCTGTATTCG-ATCT 1631 consensus_9581#2 CATTGCTTNTGCAGCGTCAAAGTAGTATCCATCT-TCCACCATTTCCTGTATTCGGATCT 475 * * * * * * * * consensus_9581#1 -GTGCTAAACGAC-GGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACTCAGC--- 580 consensus_9581#3 -ATGCNCGTTGGG-NCTGACCGGTGGACTGACCGAGATGATCACAATNNTGCTTCAC--- 283 consensus_9581#0 AATACC-GCTGGA-GATAAGAG-CGTGTAA--AGTTAACACAAT-GTTTAGAAAAGA--- 1682 consensus_9581#2 AATACCAGCTGGAAGATAAGAGGCGTGTAACAGGTTAACANAATTGTTTAGAAGACAGAG 535 * * * * * * * * consensus_9581#1 TC-CTGTCTGGCT---GTTTGCGCGATTTCCGAAACAAACCCT-TCCCAACACGGGCAAA 635 consensus_9581#3 ACATTCTCTCA------------------------------------------------- 294 consensus_9581#0 --AAACTCCCAC--AAGCATATGTTGTCTGC-----GATTCATGTTTCTACTTAAGTGGG 1733 consensus_9581#2 AGAANCTCCCACGAAAGCATATGTTGCTTATCGAATNGNCAGTGTTTNCGNACGTNTAAG 595 ** consensus_9581#1 GATCGAATACTACAACAACATTCTGACCGTCCTGTTCCACAACGGCATGACCAACAACGA 695 consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTA 1793 consensus_9581#2 GTGGGCTTGTANNAGACA-GCTCGTATTA----AGAATGCAG------------------ 632 consensus_9581#1 TCAAAACTACGAGATGTGCT---------------------------------------- 715 consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 AGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTAC 1853 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 TATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAA 1913 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 ------------------------------------------------------------ consensus_9581#3 ------------------------------------------------------------ consensus_9581#0 ATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAAT 1973 consensus_9581#2 ------------------------------------------------------------ consensus_9581#1 --------------------------------- consensus_9581#3 --------------------------------- consensus_9581#0 AAACAGTCTGCTACAATGTGCANGTAAAAAAAA 2006 consensus_9581#2 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||