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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9583#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 891 fasta sequence
[CTGTTGGCC-ACGTGGGATAGCAGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCCTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG-GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT-CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA-CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA-CCAGGTGG-TGCTGTGGGACAAGATCATTCTG-CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG-AAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACA-CCGGAACGTGACGCTTACGCTATCGTGGAACATCAT-CCCGAATGCCGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCGAACGGTCG-CCGGTAG-CCGCTTGTGTGTGCCCA--CACTTTTCCTCTTCTTTCCATCAAAGAGTGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGTGAGTGAAAAG-AAAAAAAATAAATATTGAAAATAATGTGGAAAAAATCACTAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGG]
[-] EMBL CNS09OS2 [CTGTTGGCCTAC TGGGATAGCAGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCGTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTTTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACA CCGGAACGTGAAG TTACGCTATCGTGGAACATCAT CCCGAACGCTGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGAACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCTGACGGTCG CCGGTAG CCGCTTGTGTGTGCCCA CACTTTTCCTCTTCTTTCCATCAAAGAGTGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGTGAGTGAAAAG AAAAAAAATAAATATTGAAAATAATGT GAAAAAATCACT ]
[+] EMBL CNS09OS1 [ TGGGATAGCAGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCGTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACA CCGGAACGTGACGCTTACGCTATCGTGGAACATCAT CCCGAACGCTGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCTGACGGTCG CCGGTAG CCGCTTGTGTGTGCCCA CACTTTTCCTCTTCTTTCCATCAAAGAGTGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGTGAGTGAAAAG AAAAAAAATAAATATTGAAAATAATGTGGAAAAAATCACTAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGCGGG]
[+] EMBL BM642882 [ ccggccGATAGCAGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCCTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGAGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACA CCGGAACGTGACGCTTACGCTATCGTGGAACATCAT CCCGAATGCCGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCG ]
[+] EMBL CNS09H0S [ cgacagccGATAGCAGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCGTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGGCA CCGGAACGTGACGCTTACGCTATCGTGGAACATCAT CCCGAACGCTGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGC ]
[+] EMBL BM615451 [ ccgGCGACATCAACAACTG TTCGTACCCTTCCTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCGTAGGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACGTTCTTCTACGACTACCGCACGGAGGCGCGAATCAATACAGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCTTCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGATGATGGCAATGGTTTGAAGGGACA CCGGAACGTGACGCTTACGCTATCGTGGAACATCATCCCCGAATGCCGGACTG ]
[+] EMBL BX619896 [ acngccaggAACTG TTCGTACCCTTCCTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACGTTCTTCTACGACTACCGCACGGAGGCGCGAATCAATACAGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCTTCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTTCCAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGACCGGCCGAGTACACCACGGAGCAGAACGCCCTCAACCCAGGTGGTTGCTGTGGGACNAGATCTTTCTGCCGGGGNGAGAACGCCAcc ]
[+] EMBL AGA285140 [ CTTCCTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGAGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATTATTCTG CGGGGCGAGAACGCCA ]
[+] EMBL BX608750 [ TTCCTTATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGAGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG GGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACA CCGGAACGTGACGCTTACGCTATCGTGGAACATCAT CCCGAATGCCGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCGAACGGTCG CCGGTAG CCGCTTGTGTGTGCCCA CACTTTTCCTCTTCTTTCCATCAAAGAGTGTAA ]
[-] EMBL CNS09H0T [ GCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCG GGAGAAGAACGATCTCGGCTTCATAACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTAA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACGAAAGTATTACTTCTGGGATGATGGAAATGGCTTGAAGGGGCACCCGGAACGTGAAGCTTACGCTATCGTGGAACATCAT CCCGAACGCTGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGAACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCTGACGGTCGCCCGGTAGCCCGCTTGTGTGTGCCCA CACTTTTCCTCTTCTTTCCATCAAAGAGTGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGTGAGTGAAAAG AAAAAAAATAAATATTGAAAATAATGTGGAAAAAATCAat ]
[+] EMBL BX609352 [ GTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCGAGGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTT CAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGA CGGCCGAGTACACCACGGAGCAGAACGCCCTCAA CCAGGTGG TGCTGTGGGACAAGATCATTCTG CGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACA CCGGAACGTGACGCTTACGCTATCGTGGAACATCAT CCCGAATGCCGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCGAACGGTCG CCGGTAG CCGCTTGTGTGTGCCCA CACTTTTCCTCTTCTTTCCATCAAAGAGTGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGTGAGTGAAAAGAAAAAAAAATAAATATTGAA ]
[+] EMBL BX613866 [ CGAGAATGCCAACCTGGACTTCAAGAACATGAACACG AAGTATTACTTCTGGGACGATGGCAATGGCTTGAAGGGACA TCGAAACGTGACGCTTACGCTATCGTGGAACATCAT CCCGAATGCCGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCGAACGGTCG CCGGTAG CCGC GTGTGTGCCCACCCCCTTTTCCTCTTCCTTCCATCAAAGAGTGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGT ]
[-] EMBL AGA283847 [ CGGACTGTTGCCGAGCGTGTTTGCCCACGGGCAGCACTGGTTCAAGTTCCCCGAGGCTAACATCGAGTCGCCGGTCTAGTCGAACGGTCA CCGGTAG CCGCTTGTGTGTGCCCA CACTTTTCCTCTTCTTTCCATCAAAGAGTGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGTGAGTGAAAAGAAAAAAAAATAAATATTGAAAATAATGTGGAAAAAATC CAAAAAAAA ]
consensusID : consensus_9583#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence
[AAATCGGTGTGAAAGTATTGCAACCCTTTCTCCCACGAGCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGAGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTATTTGCTAGCTTTGCTATCCACATTCTTCTACGACTACCGGGACGGAGGCGCGAATCAACCACGGTGAAGGTGCTGGTCAAAAATGTGCCAGGATTTCAGCGCATCGCGGCGCAGGAAGAACGATCTACGGCTTCATACACGTANCGATCTACGGCAACCCGATCTTGGAAACCCCGGANTGATATACAAACTCGGGGCANAACAGCTAGAAAACNCACGCCCTAGCTATCACCCTGGATAACCCTTGAAACGGGCACCCAGGAAGCTTACCAACCCAACCAGGACAACACACGACACAACCAGCCCCCACTCCCAANCNCCCANACNNCGCTGCGCCACGGCACAGGCCTGCGCNACACCCACANGCAACTCACANTTACTCCCATGCCGNGACGCGCCGGACGGCACACCAGCCCCACAAACCCCANGGGAAACCTCTCAAAAGGAAAACAAC]
[+] EMBL AL696065 [AAATCGGTGTGAAAGTATTGCAACCCTTTCTCCCACGAGCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGAGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTATTTGCTAGCTTTGCTATCCACATTCTTCTACGACTACCGGGACGGAGGCGCGAATCAACCACGGTGAAGGTGCTGGTCAAAAATGTGCCAGGATTTCAGCGCATCGCGGCGCAGGAAGAACGATCTACGGCTTCATACACGTANCGATCTACGGCAACCCGATCTTGGAAACCCCGGANTGATATACAAACTCGGGGCANAACAGCTAGAAAACNCACGCCCTAGCTATCACCCTGGATAACCCTTGAAACGGGCACCCAGGAAGCTTACCAACCCAACCAGGACAACACACGACACAACCAGCCCCCACTCCCAANCNCCCANACNNCGCTGCGCCACGGCACAGGCCTGCGCNACACCCACANGCAACTCACANTTACTCCCATGCCGNGACGCGCCGGACGGCACACCAGCCCCACAAACCCCANGGGAAACCTCTCAAAAGGAAAACAAC]
consensusID : consensus_9583#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 636 fasta sequence
[CCGCCCACGCGTCCGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCGTTATCA-GCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCGGGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGACGGCCGAGTACACCACGGAGCAGAACGCCCTCAACCAGGTGGTGCTGTGGGACAAGATCATTCTGCGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACGAAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACACCGGAACGTGACGCTTACGCTATCGTGGAACATCATCCCGAACGCTGGACTGTTGCCGAGCGTGTTTGCCCACGGGC]
[+] EMBL BM614003 [CCGCCCACGCGTCCGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCGTTATCA GCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCGGGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGACGGCCGAGTACACCACGGAGCAGAACGCCCTCAACCAGGTGGTGCTGTGGGACAAGATCATTCTGCGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACGAAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACACCGGAACGTGACGCTTACGCTATCGTGGAACATCATCCCGAACGCTGGACTGTTGCCGAGCGTGTTTGCCCACGG ]
[+] EMBL BM578173 [CCGCGGACGCGT GGG CGCGACATCAACAACTGTTTCGTACCCTTCCTTATCA GCTCAAGTATCCTTCCACCACCGGGTGCGTTCGAGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCGGGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAGCTGTTCCTGTACCTGACGGCCGAGTACACCACGGAGCAGAACGCCCTCAACCAGGTGGTGCTGTGGGACAAGATCATTCTGCGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACGAAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACACCGGAACGTGACGCTTACGCTATCGTGGAACATCATCCCGAATGCCGGACTGTTGCCGAGCGTGTTTGCCCACGGGC]
[+] EMBL BM597371 [ ccgcaGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCGTTATCACGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAAAGAGCGACGGCGGGACACACCAGCACACAAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCATCGCGGGAGAAGAACGATCTCGGCTTCATCACGTTCGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGGGAAGCAGCTGTTCCTGTACCTGACGGCCGAGTACACCACGGAGCAGAACGCCCTCAACCAGGTGGTGCTGTGGGACAAGATCATTCTGCGGGGCGAGAACGCCAACCTGGACTTCAAGAACATGAACACGAAGTATTACTTCTGGGATGATGGCAATGGCTTGAAGGGACACCGGAACGTGACGCTTACGCTATCGTGGAACATCATCCCGAACGCTGGACTGTTGCCGAGCGTGTTTG ]
consensusID : consensus_9583#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence
[AGATTCCCCGAGGTTAATGCGTTCGGGGTGTACTTTNCTCATACGAAAGAGCTGACGGCGGGACACACCAGCACACAAGATGCATACCTGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCTGTGCTTACGTTATATTGCTGCTTTGCTTCCACGTTCTTCTACGACTACCTGCACGGAGTGCGCGAATCAATACAGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCTTCGCGGGAGAAGAACGATCTCGGCCTTCATCACGTTACGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAGCTGTTCCTGTACCTTGCACGGACCGAGNTAACAACAACGGAGCAGAACGCCCTACAAANCAGGTGGCTGACTAGTNGGCGNACAACGATCATATACTNGCGAGGCGCCGAGAAACGACAAAACCATGGNACCTTTCCAACAGCAAAAACCAACNTGGCAAAACCAACGACACACACGCNNACACTTCTCACCCTTNTCACTTGGGCACACCTGCNNNCATCGCGGCCANAACATGGGANACATGGAACACNCGGGAACCACCCGGGAAAAACNAGGCTGGAA]
[+] EMBL AL929994 [AGATTCCCCGAGGTTAATGCGTTCGGGGTGTACTTTNCTCATACGAAAGAGCTGACGGCGGGACACACCAGCACACAAGATGCATACCTGTAATGACCCGCGGTAACGCTATTCTAGCGTACTCGCTAAGCGTACTGTCCTGTGCTTACGTTATATTGCTGCTTTGCTTCCACGTTCTTCTACGACTACCTGCACGGAGTGCGCGAATCAATACAGTGAAGGTGCTGGTCAAAAATGTGCCAGATTTCAGCGCTTCGCGGGAGAAGAACGATCTCGGCCTTCATCACGTTACGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAGCTGTTCCTGTACCTTGCACGGACCGAGNTAACAACAACGGAGCAGAACGCCCTACAAANCAGGTGGCTGACTAGTNGGCGNACAACGATCATATACTNGCGAGGCGCCGAGAAACGACAAAACCATGGNACCTTTCCAACAGCAAAAACCAACNTGGCAAAACCAACGACACACACGCNNACACTTCTCACCCTTNTCACTTGGGCACACCTGCNNNCATCGCGGCCANAACATGGGANACATGGAACACNCGGGAACCACCCGGGAAAAACNAGGCTGGAA]
consensusID : consensus_9583#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 195 fasta sequence
[AAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTGTAAGTATTTCCACGGACTAGCCGAACCCCCCCCCCCAATGCCGGCTTC]
[+] EMBL BX604137 [AAGATGCATACCGTAATGACCCGCGGTAACGCTATTCTAGCCTACTCGCTAAGCGTACTGTCCGTGCTTACGTTTTGCTGCTTTGCTTCCACATTCTTCTACGACTACCGCACGGAGGCGCGAATCAACACGGTGAAGGTGCTGGTGTAAGTATTTCCACGGACTAGCCGAACCCCCCCCCCCAATGCCGGCTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9583#0 CTGTTGGCCACGTGGGATAGCAGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCCT 60
consensus_9583#2 ---CCGCCCACGCGT-----CCGCGATCCGCGACATCAACAACTGTTTCGTACCCTTCGT 52
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 ------------------------AAATCGGTGTGAAAGTATTGCAACCCTTTCTCCCAC 36
consensus_9583#3 ------------------------------------------------------------
consensus_9583#0 TATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAA 120
consensus_9583#2 TATCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGGGGTGTACTTTTCTCATACGAA 112
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 GAGCAGCTCAAGTATCCTTCCACCACCGGGTGCGTTCGAGGTGTACTTTTCTCATACGAA 96
consensus_9583#3 -------------AGATTCCCCGAGGTTAATGCGTTCGGGGTGTACTTTNCTCATACGAA 47
consensus_9583#0 AGAGC-GACGGCGGGACACACCAGCACACAAGATGCATACC-GTAATGACCCGCGGTAAC 178
consensus_9583#2 AGAGC-GACGGCGGGACACACCAGCACACAAGATGCATACC-GTAATGACCCGCGGTAAC 170
consensus_9583#4 -----------------------------AAGATGCATACC-GTAATGACCCGCGGTAAC 30
consensus_9583#1 AGAGC-GACGGCGGGACACACCAGCACACAAGATGCATACC-GTAATGACCCGCGGTAAC 154
consensus_9583#3 AGAGCTGACGGCGGGACACACCAGCACACAAGATGCATACCTGTAATGACCCGCGGTAAC 107
************ ******************
consensus_9583#0 GCTATTCTAGCGTACTCGCTAAGCGTACTGTCC-GTGCTTACGT---TTTGCTGCTTTGC 234
consensus_9583#2 GCTATTCTAGCCTACTCGCTAAGCGTACTGTCC-GTGCTTACGT---TTTGCTGCTTTGC 226
consensus_9583#4 GCTATTCTAGCCTACTCGCTAAGCGTACTGTCC-GTGCTTACGT---TTTGCTGCTTTGC 86
consensus_9583#1 GCTATTCTAGCGTACTCGCTAAGCGTACTGTCC-GTGCTTACGT-ATTTGCTAGCTTTGC 212
consensus_9583#3 GCTATTCTAGCGTACTCGCTAAGCGTACTGTCCTGTGCTTACGTTATATTGCTGCTTTGC 167
*********** ********************* ********** * *******
consensus_9583#0 T-TCCACATTCTTCTACGACTACC-GCACGGAG-GCGCGAATCAAC-ACGGTGAAGGTGC 290
consensus_9583#2 T-TCCACATTCTTCTACGACTACC-GCACGGAG-GCGCGAATCAAC-ACGGTGAAGGTGC 282
consensus_9583#4 T-TCCACATTCTTCTACGACTACC-GCACGGAG-GCGCGAATCAAC-ACGGTGAAGGTGC 142
consensus_9583#1 TATCCACATTCTTCTACGACTACCGGGACGGAG-GCGCGAATCAACCACGGTGAAGGTGC 271
consensus_9583#3 T-TCCACGTTCTTCTACGACTACCTGCACGGAGTGCGCGAATCAAT-ACAGTGAAGGTGC 225
* ***** **************** * ****** *********** ** **********
consensus_9583#0 TGGTCAAAAATGTGCCAG-ATTTCAGCGCATCGCGG---GAGAAGAACGATCT-CGGCTT 345
consensus_9583#2 TGGTCAAAAATGTGCCAG-ATTTCAGCGCATCGCGG---GAGAAGAACGATCT-CGGCTT 337
consensus_9583#4 TGGTGTAAGTATTTCCAC-GGACTAGCCGAACCCCC---CCCCC---CAATGC-CGGCTT 194
consensus_9583#1 TGGTCAAAAATGTGCCAGGATTTCAGCGCATCGCGGCGCAGGAAGAACGATCTACGGCTT 331
consensus_9583#3 TGGTCAAAAATGTGCCAG-ATTTCAGCGCTTCGCGG---GAGAAGAACGATCTCGGCCTT 281
**** ** * *** *** * * * ** * ***
consensus_9583#0 CAT-CACGT-TCGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAG 403
consensus_9583#2 CAT-CACGT-TCGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAG 395
consensus_9583#4 C----------------------------------------------------------- 195
consensus_9583#1 CATACACGTANCGATCT--ACGGCAACCCGATCTTGGAAACC--CCGGANTGATATACAA 387
consensus_9583#3 CAT-CACGTTACGATCTCGGCACCGATCTGAACCCGCTGTTCAACTGGAACGTGAAGCAG 340
*
consensus_9583#0 CTGTTCCTGTACCTGACG---GCCGAGTACACCACG---GAGCAGAACGCCCTCAACCAG 457
consensus_9583#2 CTGTTCCTGTACCTGACG---GCCGAGTACACCACG---GAGCAGAACGCCCTCAACCAG 449
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 AC---TCGGGGCANAACA---GCTAGAAAACNCACGCCCTAGCT-ATCACCCTGGATAAC 440
consensus_9583#3 CTGTTCCTGTACCTTGCACGGACCGAGNTAACAACAACGGAGCAGAACGCCCTACAAANC 400
consensus_9583#0 GTGGTGCTGTGGGACAAGATCATTCTGCGGGGCGAGAACGCCAACCTGGACTTCA-AGAA 516
consensus_9583#2 GTGGTGCTGTGGGACAAGATCATTCTGCGGGGCGAGAACGCCAACCTGGACTTCA-AGAA 508
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 CCTTGA------AACGGG--CACCCAGGAAGCTTACCAACCCAACCAGGACAACACACGA 492
consensus_9583#3 AGGTGGCTGACTAGTNGG--CGNACAACGATCATATACTNGCGAG-GCGCCGAGAAACGA 457
consensus_9583#0 CATGAACACGAAGTATTACTT-CTGGGATGATGGCAATGGCTTGAAGGGACACCGGAACG 575
consensus_9583#2 CATGAACACGAAGTATTACTT-CTGGGATGATGGCAATGGCTTGAAGGGACACCGGAACG 567
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 CACAACCAGCCCCCACTCCCAANCNCCCANACNN-CGCTGCGCCACGGCACAGGCCTGCG 551
consensus_9583#3 CAAAACCATGGNACCTTTCCAACAGCAAAAACCAACNTGGCAAAACCAACGACACACACG 517
consensus_9583#0 TGACGCTTACGCTATCGTGGAACATCATCCCGAATGCCGGACTGTTGCCGAGCGTGTTTG 635
consensus_9583#2 TGACGCTTACGCTATCGTGGAACATCATCCCGAACGCTGGACTGTTGCCGAGCGTGTTTG 627
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 CNACACCCACANGCAACTCACANTTACTCCCATGCCGNGACGCGCCGGACGGCACACCAG 611
consensus_9583#3 CNNACACTTCTCACCCTTNTCACTTGGGCACACCTGCNNNCATCGCGGCCANAACATGGG 577
consensus_9583#0 CC-CACGGGCAGCACTCGTTCAAGTTCCCCGAGGCTTACATCGAGTCGCCGGTCTAGTCG 694
consensus_9583#2 CC-CACGGGC-------------------------------------------------- 636
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 CCCCACAAACCCCANGGGAAACCTCTCAAAAGGAAAACAAC------------------- 652
consensus_9583#3 ANACATGGAACACNCGGGAA-CCACCCGGGAAAAACNAGGCTGGAA-------------- 622
consensus_9583#0 AACGGTCGCCGGTAGCCGCTTGTGTGTGCCCACACTTTTCCTCTTCTTTCCATCAAAGAG 754
consensus_9583#2 ------------------------------------------------------------
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 ------------------------------------------------------------
consensus_9583#3 ------------------------------------------------------------
consensus_9583#0 TGTAACTGTACTGTCCGAAACCATTTTGTATTAGAGCAAATGGGTGAGTGAAAAGAAAAA 814
consensus_9583#2 ------------------------------------------------------------
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 ------------------------------------------------------------
consensus_9583#3 ------------------------------------------------------------
consensus_9583#0 AAATAAATATTGAAAATAATGTGGAAAAAATCACTAAAAAAAAAAAAAAAAAAGGCCACA 874
consensus_9583#2 ------------------------------------------------------------
consensus_9583#4 ------------------------------------------------------------
consensus_9583#1 ------------------------------------------------------------
consensus_9583#3 ------------------------------------------------------------
consensus_9583#0 TGTGCCCGAGCTGCGGG 891
consensus_9583#2 -----------------
consensus_9583#4 -----------------
consensus_9583#1 -----------------
consensus_9583#3 -----------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||