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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9592#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1360 fasta sequence
[GGCCAAGAATCGGCACGATGGATTACACGAAGC-AATTGCACGTAGTTTTGTTATTA-ACAGGTA-TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT-AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA-AAAAATCATCGAAGATCTGAA-GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG-CAAATACTACATGCTAGCAGCCAACTACTATCGATT-GGTCGGCC-AGCACAGTGATTACTACCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT-GGGCACAGCAAGCTTTCTGCCTCGGTTT-GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGACGTTCAAGCGGCCGGCCAACAAGCGCACCATCACGTTCGACGAGATTGCCAAGGAGGCAAAACTGCCGATCAAGGAGGTCGAAATACTGATCATGAAGGCGCTGGCCCAGGGGCTCGTCAAAGGTGCGATCGATGAGGTGGCCGGTGTGGTGAACATGACCTGGGTGCAGCCCCGCGTGCTCGACCGCAAGCAGGTGGCCGGTATGGCCTCTACCCTGGACACGTGGATGTCGTCCATCACGTCGATGGAGCAGCTGATCGAGAGCCGGGCGAGCGAAATTCTCACCAACTGAGACTGTGCGAAGGAGTGGAAAGGAGTGGAAACACAGCTCTTCCCCCCCTCTTTACGCCCCACACCCACGCAGTCGCTGAGCGCGTTTGTTCAAGCTGAAGTTTACACTTAAATAAATGAATAAGACTCTAT]
[+] EMBL BX469861 [GGCCAAGAATCGGCACGATGGATTACACGAAGCAAATTGCACGTAGTTTTGTTATTA ACAGGTA TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAAAACGAGGAAGCTTTGCTTGCGCTTTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCTCAAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAACAAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGGCCAAATACTACATGCTAGCAGNCAACTACTATCGATTGGGTCGGCCAAGCACAGTGATTACT ]
[+] EMBL CNS09NSI [ tctaaATTACACG AGC AATTGCACGTA TTTTGTTATTA ACAGGTA TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTAGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTATCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT GGGCACAGCAAGCTTTCTGCCTCGGTTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGACGTTCAAGCGGC ]
[+] EMBL BM644714 [ ccgCACGAAGC AATTGCACGTAGTTTTGTTATTA ACAGATA TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGA ]
[+] EMBL BM656282 [ cCGAAGC AATTGCACGTAGTTTTGTTATTA ACAGGTA TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAAAACGAGGAAGCTTTGCTTGCGCTTTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTATCGGTGTGGTTTGCAATTTTTGGGCTGGTCGATCGATACCTACCCTAAGGATCAGTGGGGCACAGCAAGCTTTCTGCCTCGGTTTGGGCGGCACTGC ]
[+] EMBL BX604503 [ gtgt AATTGCACGTAGTTTTGTTATTA ACAGGTA TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTACCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATA ]
[+] EMBL BX602768 [ CACGTAGTTTTGTTATTA ACAGGTATTTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAG ]
[+] EMBL CNS09JKI [ GTAGTTTTGTTATTA ACAGGTA TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATAATAAATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACA ]
[+] EMBL AL934746 [ cgcccaggTTG TATTACAC GGTA TTTGAGAAT AAAGTA TCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGGTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCG TCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGG ]
[+] EMBL BX624064 [ TA TTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAATGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTACCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT GGGCACAGCAAGCTTTCTGCCTCGGNTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGCTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAG ]
[-] EMBL CNS09JKJ [ ATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTTGTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAAGGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTACCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT GGGCACAGCAAGCTTTCTGCCTCGGTTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGACGTTCAAGCGGCCGGCCAACAAGCGCACCATCACGTTCGACGAGATTGCCAAGGAGGCAAAACTGCCGATCAAGGAGGTCGAAATACTGATCATGAAGGCGCTGGCCCAGGGGCTCGTCAAAGGTGCGATCGATGAGGTGGCCGGTGTGGTGtgccat ]
[+] EMBL BX623772 [ ACGTCAACGTTGCAAGCTACCTGGCGGAACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGGGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTACCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT GGGCACAGCAAGCTTTCTGCCTCGGTTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCNATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGT ]
[-] EMBL CNS09NSJ [ GCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAAGCGATCGCGTTCCTCGAGAAGCT AAAGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTATCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT GGGCACAGCAAGCTTTCTGCCTCGGTTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGACGTTCAAGCGGCCGGCCAACAAGCGCACCATCACGTTCGACGAGATTGCCAAGGAGGCAAAACTGCCGATCAAGGAGGTCGAAATACTGATCATGAAG GCTGGCCCAGGGGCTCGTCAAAGGTGCGATCGATGAGGTGGCCGG ]
[+] EMBL BX610471 [ CTCGAGCATCTGAACCAGCTGGATGAGACGAA AAAAATCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTACCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT GGGCACAGCAAGCTTTCTGCCTCGGTTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATAAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGACGTTCAAGCGGCCGGCCAACAAGCGCACCATCACGTTCGACGAGATTGCCAAGGAGGCAAAACTGCCGATCAAGGAGGTCGAAATACTGATCATGAAGGCGCTGGCCCAGGGGCTCGTCAAAGGTGCGATCGATGAGGTGGCCGGTGTGGTGAACATGACCTGGGTGCAGCCCCGCGTGCTCGACCGCAAGCAGGTGGCCGGTATGGCCTCTACCCTGGACACGTGGATGTCGTCCATCACGTCGATGGAGCAGCTGATCGAGAGC ]
[+] EMBL BX609183 [ TCATCGAAGATCTGAA GGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGG CAAATACTACATGCTAGCAGCCAACTACTATCGATT GGTCGGCC AGCACAGTGATTACTACCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGT GGGCACAGCAAGCTTTCTGCCTCGGTTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATAAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGACGTTCAAGCGGCCGGCCAACAAGCGCACCATCACGTTCGACGAGATTGCCAAGGAGGCAAAACTGCCGATCAAGGAGGTCGAAATACTGATCATGAAGGCGCTGGCCCAGGGGCTCGTCAAAGGTGCGATCGATGAGGTGGCCGGTGTGGTGAACATGACCTGGGTGCAGCCCCGCGTGCTCGACCGCAAGCAGGTGGCCGGTATGGCCTCTACCCTGGACACGTGGATGTCGTCCATCACGTCGATGGAGCAGCTGATCGAGAGCCGGGCGAGCGAAATTCTCACCAACTGAGACTGTGCGAAGGAGTGGAAAGGAGTGGAAACACAGCTCTTCCCCCCCTCTTTACGCCCCACACCCACGCAGTCGCTGAGCGCGTTTGTTCAAGCTGAAGTTTACACTTAAATAAATGAATAAGAC ]
[+] EMBL BM633990 [ ccgCTCGGTTT GGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACTGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGACGTTCAAGCGGCCGGCCAATAAGCGCACCATCACGTTCGACGAGATTGCCAAGGAGGCTAAACTGCCGATCAAGGAGGTCGAAATACTGATCATGAAGGCGCTGGCCCAGGGGCTCGTCAAAGGTGCGATCGATGAGGTGGCCGGTGTTGTGAACATGACCTGGGTGCAGCCCCGCGTGCTCGACCGCAAGCAGGTGGCCGGTATGGCCTCTACCCTGGACACGTGGATGTCGTCCATCACGTCGATGGAGCAGCTGATCGAGAGCCGGGCGAGCGAAATTCTCACCAACTGAGACTGTGCGAAGGAGTGGAAAGGAGTGGAAACACAGCTCTTCCCCCCCTCTTTACGCCCCACACCCACGCAGTCGCTGAGCGCGTTTGTTCAAGCTGAAGTTTACACTTAAATAAATGAATAAGACTCTAT]
consensusID : consensus_9592#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1059 fasta sequence
[AGATCCCCGCGGTTATATTTGAGAATAAAAGTAATCCTAATGTCACGTCTACGTTGCAAGCTACCTGGCTGGAACAGNAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAATGAAAAGCTATTGGAATGAGTTGACCATAAAGTGTGGACACCTTCGTGAAGCATCCTGCACCTACAGAACGAGGAAGCTATATGCTATGCGCTGTACCACAACTCTCATACTGCCTCCTTCGAAACAAAAATCAATCCTATATTGCNAAAAGGTGGAAATCCTCACCGTACGTACATCTAACGTACCTTATACCGATAAGAAGGAAGCGATACGCGTTCCTCGCACGAAGCTAAACGTGACANAGGTGCAAAACTCTTGCTGCACCAGGGCCCGTCATGGATGTGCANGGTGCTNGCCGTGGNCCAGGATCCATCTACGANCATACTGGCAACGCCGAAGNCTTGNGCATTGGAGCAACTGGAANANAAAAATCCACTCGGAACAGCATCTAGANAGNGGACCNNTACCTACCGAAGNGGAGGACGGGAACNATGGTAGACGGCCCGGGGTTTGCACGGGCNAGAAATACAGCNTCAACATTGCTCCAGCNGGGCACAAACTAACTAATACGAATCTTGGGTACNNCGGACCCNCANACACCCCAANGTCGGCCANATTNAACCTAAACCCAGGANTTACGCTCNNGATAACAAGGCAAACCTAACCTCANNATNGGGTGGAACTTGGGNTNCCCGAACTACCGGANNATAACNCCCTANAAACACCAATCAACAGCGGGANGTCACNCAGNCATGGGGGTTGTACANCAAAAGACAAAAGCGAAGCNCANNNACCCTTGGCCCCATACNTCGCTCAATAANGNGGNGCGGACAAACAAGGGACCTCNGNGGACGCCAAAANGCCAGANACNTNAANCAAAAGAGAGTACCGGCGTGAAAAGNACCNTGGCACTAAACACGCANTACANAACNAGCCACGTNTGCAACATCCGTCACCCAAAGAGGTAACCCAAAATCACATN]
[+] EMBL AL929878 [AGATCCCCGCGGTTATATTTGAGAATAAAAGTAATCCTAATGTCACGTCTACGTTGCAAGCTACCTGGCTGGAACAGNAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAATGAAAAGCTATTGGAATGAGTTGACCATAAAGTGTGGACACCTTCGTGAAGCATCCTGCACCTACAGAACGAGGAAGCTATATGCTATGCGCTGTACCACAACTCTCATACTGCCTCCTTCGAAACAAAAATCAATCCTATATTGCNAAAAGGTGGAAATCCTCACCGTACGTACATCTAACGTACCTTATACCGATAAGAAGGAAGCGATACGCGTTCCTCGCACGAAGCTAAACGTGACANAGGTGCAAAACTCTTGCTGCACCAGGGCCCGTCATGGATGTGCANGGTGCTNGCCGTGGNCCAGGATCCATCTACGANCATACTGGCAACGCCGAAGNCTTGNGCATTGGAGCAACTGGAANANAAAAATCCACTCGGAACAGCATCTAGANAGNGGACCNNTACCTACCGAAGNGGAGGACGGGAACNATGGTAGACGGCCCGGGGTTTGCACGGGCNAGAAATACAGCNTCAACATTGCTCCAGCNGGGCACAAACTAACTAATACGAATCTTGGGTACNNCGGACCCNCANACACCCCAANGTCGGCCANATTNAACCTAAACCCAGGANTTACGCTCNNGATAACAAGGCAAACCTAACCTCANNATNGGGTGGAACTTGGGNTNCCCGAACTACCGGANNATAACNCCCTANAAACACCAATCAACAGCGGGANGTCACNCAGNCATGGGGGTTGTACANCAAAAGACAAAAGCGAAGCNCANNNACCCTTGGCCCCATACNTCGCTCAATAANGNGGNGCGGACAAACAAGGGACCTCNGNGGACGCCAAAANGCCAGANACNTNAANCAAAAGAGAGTACCGGCGTGAAAAGNACCNTGGCACTAAACACGCANTACANAACNAGCCACGTNTGCAACATCCGTCACCCAAAGAGGTAACCCAAAATCACATN]
consensusID : consensus_9592#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 716 fasta sequence
[CAGAATNGCCCGAGGTTTACTACGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAACGCGATCGCGTTCCTCGAGAAGCTAAAGGACAAGGTGCAACAATCTGCGACCAGGCCGTATGGCATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAAAAAAATCATCGAAGATCTGAAGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGGCAAATACTACATGCTAGCAGCCAACTACTATCGACTTGGTCGGCCAGCACAGTGATTACTACCGGTGTGGTTTGCAATTATGGGCTGCTCGATCGATACCTACCTAAGGATCAGTGGGCACAGCAAGCTTTACTGCCTCGGTTTGGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGCAGCTGCTAGCACATCCAATCCTTGCAATCGCGTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTNAGCGTGCGTTCAACTCGA]
[+] EMBL AL692787 [CAGAATNGCCCGAGGTTTACTACGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGTACAACGAAAAGCTTTGGAATGAGTTGACCATAAAGGTGGACACCTTCGTGAAGCATCCTGCCCTACAGAACGAGGAAGCTTTGCTTGCGCTGTACCACAACTTCATCGCCTCCTTCGAAACAAAAATCAATCCTTACGGTTTGGTGGAAATCCTCACCGTCGTCATTTCGTACCTTTCCGATAAGAAGGAACGCGATCGCGTTCCTCGAGAAGCTAAAGGACAAGGTGCAACAATCTGCGACCAGGCCGTATGGCATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAAAAAAATCATCGAAGATCTGAAGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGGCAAATACTACATGCTAGCAGCCAACTACTATCGACTTGGTCGGCCAGCACAGTGATTACTACCGGTGTGGTTTGCAATTATGGGCTGCTCGATCGATACCTACCTAAGGATCAGTGGGCACAGCAAGCTTTACTGCCTCGGTTTGGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGCAGCTGCTAGCACATCCAATCCTTGCAATCGCGTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTNAGCGTGCGTTCAACTCGA]
consensusID : consensus_9592#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 544 fasta sequence
[CCGCCCACGCGTCCGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAAAAAAATCATCGAAGATCTGAAGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGGCAAATACTACATGCTAGCAGCCAACTACTATCGATTGGTCGGCCAGCACAGTGATTACTATCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGTGGGCACAGCAAGCTTTCTGCCTCGGTTTGGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGA]
[+] EMBL BM609726 [CCGCCCACGCGTCCGGACAAGGTGAAAATCTGCGACCAGGCCGTATGGATGTGCAAGGTGCTGCAGGGCCAGATCCATCTCGAGCATCTGAACCAGCTGGATGAGACGAAAAAAATCATCGAAGATCTGAAGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGTGCACGGCAAATACTACATGCTAGCAGCCAACTACTATCGATTGGTCGGCCAGCACAGTGATTACTATCGGTGTGGTTTGCAATTTTTGGGCTGCTCGATCGATACCTACCCTAAGGATCAGTGGGCACAGCAAGCTTTCTGCCTCGGTTTGGCGGCACTGCTTGGCGAAGGCATCTACAACATCGGAGAGCTGCTAGCACATCCAATCCTTGAATCGCTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTTGCGTGCGTTCAACTCGGGCGACATTGTCAAGTTCGAGCAGATGAAGCCGAAATGGAGCTCGATTGCCGATCTGGCCGCGCAGGAGGTGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9592#0 GGCCAAGAATCGGCACGATGGATTACACGAAGCAATTGCACGTAGTTTTGTTATTAACAG 60
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 ------------------------------------------------AGATCCCCGCGG 12
consensus_9592#0 GTATTTGAGAATAAAAGTAATTCATAATGTCCAACGTCAACGTTGCAAGCTACCTGGCGG 120
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------CAGAAT 6
consensus_9592#1 TTATATTTGAGAATAAAAGTAATCCTAATGTCACGTCTACGTTGCAAGCTACCTGGCTGG 72
consensus_9592#0 AACAGAAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGT 180
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 NGCCCGAGGTTTACTACGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGT 66
consensus_9592#1 AACAGNAGAAAACCACCGATAAAGATCTAGCGGCCGAATGGACGGTGCTGGAAGAGTTGT 132
consensus_9592#0 ACAACGAAAAGCT-TTGGAATGAGTTGACCATAAAG-GTGGACACCTTCGTGAAGCATCC 238
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ACAACGAAAAGCT-TTGGAATGAGTTGACCATAAAG-GTGGACACCTTCGTGAAGCATCC 124
consensus_9592#1 ACAATGAAAAGCTATTGGAATGAGTTGACCATAAAGTGTGGACACCTTCGTGAAGCATCC 192
consensus_9592#0 TGC-CCTACAGAACGAGGAAGCTTTGCT---TGCGCTGTACCACAACTTC---ATCGCCT 291
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 TGC-CCTACAGAACGAGGAAGCTTTGCT---TGCGCTGTACCACAACTTC---ATCGCCT 177
consensus_9592#1 TGCACCTACAGAACGAGGAAGCTATATGCTATGCGCTGTACCACAACTCTCATACTGCCT 252
consensus_9592#0 CCTTCGAAACAAAAATCAATCCT----TACGGTTTGGTGGAAATCCTCACCGTCGTCATT 347
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 CCTTCGAAACAAAAATCAATCCT----TACGGTTTGGTGGAAATCCTCACCGTCGTCATT 233
consensus_9592#1 CCTTCGAAACAAAAATCAATCCTATATTGCNAAAAGGTGGAAATCCTCACCGTACGTACA 312
consensus_9592#0 TCGTACCTTTCCGATA-----AGAAGGAA-GCGATCGCGTTCCTCGAGAAGCTAAAGGAC 401
consensus_9592#3 ------------------------------------------CCGCCCACGCGTCCGGAC 18
consensus_9592#2 TCGTACCTTTCCGATA-----AGAAGGAACGCGATCGCGTTCCTCGAGAAGCTAAAGGAC 288
consensus_9592#1 TCTAACGTACCTTATACCGATAAGAAGGAAGCGATACGCGTTCCTCGCACGAAGCTAAAC 372
* * * **
consensus_9592#0 ------AAGGTGAAA--ATCT-GCG--ACCAGG--CCGTATGG-ATGTGCAAGGTGCTG- 446
consensus_9592#3 ------AAGGTGAAA--ATCT-GCG--ACCAGG--CCGTATGG-ATGTGCAAGGTGCTG- 63
consensus_9592#2 ------AAGGTGCAACAATCT-GCG--ACCAGG--CCGTATGGCATGTGCAAGGTGCTG- 336
consensus_9592#1 GTGACANAGGTGCAAAACTCTTGCTGCACCAGGGCCCGTCATGGATGTGCANGGTGCTNG 432
***** ** *** ** ****** **** * ******* ******
consensus_9592#0 ---CAGGGCCAGATCCATCT-CGAGCATCTGAACCA-GCTGGA----TGAG-ACGAAAAA 496
consensus_9592#3 ---CAGGGCCAGATCCATCT-CGAGCATCTGAACCA-GCTGGA----TGAG-ACGAAAAA 113
consensus_9592#2 ---CAGGGCCAGATCCATCT-CGAGCATCTGAACCA-GCTGGA----TGAG-ACGAAAAA 386
consensus_9592#1 CCGTGGNCCAGGATCCATCTACGANCATACTGGCAACGCCGAAGNCTTGNGCATTGGAGC 492
* * ********* *** *** * * ** * * ** * * *
consensus_9592#0 AATC----ATCGAAGATCTGA--AGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGT 550
consensus_9592#3 AATC----ATCGAAGATCTGA--AGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGT 167
consensus_9592#2 AATC----ATCGAAGATCTGA--AGGACATCCTCGAGGAGGCGGGCAATGTGACGCCGGT 440
consensus_9592#1 AACTGGAANANAAAAATCCACTCGGAACAGCATCTAGANAGNGGACCNNTACCTACCGAA 552
** ** *** * *** * ** ** * ** * ***
consensus_9592#0 GCACGGCAAATACTACATGCTAG-CAGCCAACTACTATC--GA-TTGGTCGGCCAGCACA 606
consensus_9592#3 GCACGGCAAATACTACATGCTAG-CAGCCAACTACTATC--GA-TTGGTCGGCCAGCACA 223
consensus_9592#2 GCACGGCAAATACTACATGCTAG-CAGCCAACTACTATC--GACTTGGTCGGCCAGCACA 497
consensus_9592#1 GNGGAGGACGGGAACNATGGTAGACGGCCCGGGGTTTGCACGGGCNAGAAATACAGCNTC 612
* * * *** *** * *** * * * * ****
consensus_9592#0 GTGATTACTACCGGTG---------TGGTT--TGCAATTTTTGGGCTGCTCG-ATCGATA 654
consensus_9592#3 GTGATTACTATCGGTG---------TGGTT--TGCAATTTTTGGGCTGCTCG-ATCGATA 271
consensus_9592#2 GTGATTACTACCGGTG---------TGGTT--TGCAATTAT-GGGCTGCTCG-ATCGATA 544
consensus_9592#1 AACATTGCTCCAGCNGGGCACAAACTAACTAATACGAATCTTGGGTACNNCGGACCCNCA 672
*** ** * * * * * * * * * *** ** * * *
consensus_9592#0 CCTACCCTAAGGATCAGTGGGCACAGCAAGCTTT-CTGCCTCGGTTTGGC--GGCACTGC 711
consensus_9592#3 CCTACCCTAAGGATCAGTGGGCACAGCAAGCTTT-CTGCCTCGGTTTGGC--GGCACTGC 328
consensus_9592#2 CCTACC-TAAGGATCAGTGGGCACAGCAAGCTTTACTGCCTCGGTTTGGC--GGCACTGC 601
consensus_9592#1 NACACCCCAANGTC----GGCCANATTNAACCTAAACCCAGGANTTACGCTCNNGATAAC 728
*** ** * ** ** * * * * * ** ** * *
consensus_9592#0 TTGGCGAAGGCATCTACAACATCGGAG-AGCTGCTAGCACATCCAATCCTTG-AAT---- 765
consensus_9592#3 TTGGCGAAGGCATCTACAACATCGGAG-AGCTGCTAGCACATCCAATCCTTG-AAT---- 382
consensus_9592#2 TTGGCGAAGGCATCTACAACATCGGAGCAGCTGCTAGCACATCCAATCCTTGCAAT---- 657
consensus_9592#1 AAGGCAAACCTAACCTCANNATNGGGTGGAACTTGGGNTNCCCGAACTACCGGANNATAA 788
*** ** * * ** ** ** * * ** * *
consensus_9592#0 CGC-TCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTT-GCGTGCGTTCAAC-TCGG 822
consensus_9592#3 CGC-TCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTT-GCGTGCGTTCAAC-TCGG 439
consensus_9592#2 CGCGTCAACGGTACCGAAAACGAGTGGCTGGTGGAGCTGTNAGCGTGCGTTCAAC-TCGA 716
consensus_9592#1 CNCCCTANAAACACCAATCAACAGCGGGANGTCACNCAGNC-ATGGGGGTTGTACANCAA 847
* * * *** * * ** ** ** * * * * *** ** *
consensus_9592#0 GCGACATTGTC-AAGTTCGAGCAGATGAAGCCGAA-ATGGAGCTCGATTGC-CGATCTGG 879
consensus_9592#3 GCGACATTGTC-AAGTTCGAGCAGATGAAGCCGAA-ATGGAGCTCGATTGC-CGATCTGG 496
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 AAGACAAAAGCGAAGCNCANNNACCCTTGGCCCCATACNTCGCTCAATAANGNGGNGCGG 907
consensus_9592#0 CCGCGCAGGAGG--TGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGATGGAGATGAC 937
consensus_9592#3 CCGCGCAGGAGG--TGAAGCTGCGGCAGAAGATTTCACTCCTCTGCCTGA---------- 544
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 ACAAACAAGGGACCTCNGNGGACGCCAAAANGCCAGANACNTNAANCAAAAGAGAGTACC 967
consensus_9592#0 GTTCAAGCGGCCGGCCAACAAGCGCACCATCACGTTCGACGAGATTGCCAAGGAGGCAAA 997
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 GGCGTGAAAAGNACCNTGGCACTAAACACGCANTACANAACNAGCCACGTNTGCAACATC 1027
consensus_9592#0 ACTGCCGATCAAGGAGGTCGAAATACTGATCATGAAGGCGCTGGCCCAGGGGCTCGTCAA 1057
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 CGTCACCCAAAGAGGTAACCCAAAATCACATN---------------------------- 1059
consensus_9592#0 AGGTGCGATCGATGAGGTGGCCGGTGTGGTGAACATGACCTGGGTGCAGCCCCGCGTGCT 1117
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 ------------------------------------------------------------
consensus_9592#0 CGACCGCAAGCAGGTGGCCGGTATGGCCTCTACCCTGGACACGTGGATGTCGTCCATCAC 1177
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 ------------------------------------------------------------
consensus_9592#0 GTCGATGGAGCAGCTGATCGAGAGCCGGGCGAGCGAAATTCTCACCAACTGAGACTGTGC 1237
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 ------------------------------------------------------------
consensus_9592#0 GAAGGAGTGGAAAGGAGTGGAAACACAGCTCTTCCCCCCCTCTTTACGCCCCACACCCAC 1297
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 ------------------------------------------------------------
consensus_9592#0 GCAGTCGCTGAGCGCGTTTGTTCAAGCTGAAGTTTACACTTAAATAAATGAATAAGACTC 1357
consensus_9592#3 ------------------------------------------------------------
consensus_9592#2 ------------------------------------------------------------
consensus_9592#1 ------------------------------------------------------------
consensus_9592#0 TAT 1360
consensus_9592#3 ---
consensus_9592#2 ---
consensus_9592#1 ---
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||