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Anopheles gambiae
cluster # 9625 cluster # 9625       Sequences # 18       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9625#0 length = 1103 sequences # 15  
consensus_9625#1 length = 850 sequences # 3  

consensusID : consensus_9625#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1103
fasta sequence
                              [CCGCCCGTGAATACAACCGGAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGC-CGCCAGT-CCGGGCGGGGAAGATGCGCGTC-TCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG-ACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC-GAATCATGCCGTTCTTCTTCGGC---C-CCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC-CGGCGACCAGCCGG-AACCGC-TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC-CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG-ATC-GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA-CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT-CGGCACCACTGCT-CATTGTGT-GAAGAAAGTAAAAGCGCGGAAAACAACACAAAACAGGGAAAATTCGTTTTTCGCAGCTCGCTGTGTATCGCTGCGTACGGCACGGCAGGCGG]

[+] EMBL CNS09BBQ             [CCGCCCGTGAATACAACCGGAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGC CGCCAGT CCGGGCGGGGAAGATGCGCGTC TCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG ACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGAAAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGAAGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACAACAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGGAAACCGC TCTGGTGCACCTTCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAATTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTTTTCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTTGGCCAGCTTCTGCCGGACCAGTTCGATGGC                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09GPF             [              cACCGGAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCAGCGCCCCCGC CGCCAGT CCGGGCGGGGAAGATGCGCGTC TCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGC  ACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCa                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09OLE             [                  GGAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCGCGCCAGT CCGGGCGGGGAAGATGCGCGTC TCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCGAACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGAAGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCGGA AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAAGAGCCCCGTCACTGTTCTCTTACCCACG                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09F4E             [                          GTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCA CGGGCCCAGGTACGGTACCTCCATCTCGATGCACAACTGTTCGGCGCCCCCGC CGCCAGT CCGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS09I4N             [                                                                                                     CGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCCGGCCCAGGTACGGTACCTCCATCTCGATGCACAACTGTTCGGCGCCCCCGC CGCCAGT TCGGGCGGGGAAGATGCGCGTT TCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCA ACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGACAGTCCAGCTGTCCCCAGTTGACCTCGGTCAGGAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CNS09OLD             [                                                                                                                                                                             CGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCCGCGCCCCCGC CGCCAGTCCCGGGCGGGGAAGATGCGCGTC TCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG ACCCTCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGTGCGGCACCACTGCTCCATTGTGTCGAAGAA                                                                                      ]
[-] EMBL CNS0958S             [                                                                                                                                                                                         CAGGTAC GTACCTCCATCTCGATGCACATCTGTTC GCGCCCCCGC CGCCAGT CCGGGCGGGGAAGATGCGCGTC TCGGTCGTGCACTT GGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG ACCTTCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACA                                                              ]
[-] EMBL CNS09BBP             [                                                                                                                                                                                                                                                         GGAAGATGCGCGTCTTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG ACCCTCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACA                                                              ]
[-] EMBL CNS09I4M             [                                                                                                                                                                                                                                                                                                      CTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG ACCT CTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGGTCTTCTTCGGC   C CCCGCCAGATGATTGCATCGTTTTTTCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GG CCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACA                                                              ]
[-] EMBL CNS09GPE             [                                                                                                                                                                                                                                                                                                                                                                                                                   GCGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGTACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGACGCGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACA                                                              ]
[-] EMBL CNS09F4D             [                                                                                                                                                                                                                                                                                                                                                                                                                      CCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCAGCGTATCCAGCACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GAATCATGCCGTTCTTCTTCGGC   C CCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GGT CTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACAGCGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACAAAACAGGGAAAATTCGTTTTTCGCAGCTCGCTGTGTATCGCTGCGTACGGCACGGCAG    ]
[-] EMBL BM638374             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGCGTATCCAGCACCAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGC GTATCATGCCGTTCTTCTTCGGC   C CCCGCCAGATGATTGCATCATCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACAC CGGCGACCAGCCCG AACCGCTTCTGGTGCACCTGCTCACCGAGTACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCGAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTGCCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATCGGGCCCTTTCGGCCCAGTCGCACACAGCTGCTGATTGGGACAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACAAAACAGGGAAAATTCGGTTTTCGCAGCTCGCTGCGTATCGGTGCGTACGGCACGGCAGGCGG]
[-] EMBL CNS09HLF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTGGCGGAATCATGCCGTTCTTCTTCGGCGCGCGCGCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACACGCGGCGACCAGCCGG AACCGC TCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACAC                                                               ]
[-] EMBL CNS095VY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CACCGAGCACACCGAGCACGCGTGGCTGCGACGGAC CGCAGATGTCGATATCGAGCACTCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGCCGGACCAGTGCGATGGCCGG ATC GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACAAAACAGGGA                                                     ]
[-] EMBL CNS09A8I             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGCCGGCATC GGTCCTTTCGGACCGGTCGCACACAGCTGCTGATTGGGGCAGCCGGCACA CGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGGGGCAGTGGGCTGGTGCATCGCTTGGAACGT CGGCACCACTGCT CATTGTGT GAAGAAAGTAAAAGCGCGGAAAACAACACA                                                              ]


>consensus_9625#0 CCGCCCGTGAATACAACCGGAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAA AACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAAC TCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGC TGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCCGCCAGTC CGGGCGGGGAAGATGCGCGTCTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTC TCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACG TCGAGCAGCGCGACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGTC CCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAGC ACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGCGAATCATGCCGTTC TTCTTCGGCCCCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGAC ATCAGGCTCAGATTGTCCTCGATGTACACCGGCGACCAGCCGGAACCGCTCTGGTGCACC TGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGACCGCAGATGTCGATATCGAGC ACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACT GTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCC AGCTTCTGCCGGACCAGTGCGATGGCCGGATCGGTCCTTTCGGACCGGTCGCACACAGCT GCTGATTGGGGCAGCCGGCACACGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCGG GGCAGTGGGCTGGTGCATCGCTTGGAACGTCGGCACCACTGCTCATTGTGTGAAGAAAGT AAAAGCGCGGAAAACAACACAAAACAGGGAAAATTCGTTTTTCGCAGCTCGCTGTGTATC GCTGCGTACGGCACGGCAGGCGG



consensusID : consensus_9625#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 850
fasta sequence
                              [TTTTTTTTTTTTTCAACCGAAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCCCGCCAGTCCGGGCGGGGAAGATGCGCGTTTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG-ACCTCCTGCGGCGTCGTCACCAGCACTGC-GCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTC-GCG-GACAGATGCTCGTCGG-ACGTGCCG-GGCG-GCGTATCCAGCAAAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGCGAATCATGCCGTTCTTCTTCGGCCCCCGCCAGAAGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACACCGGCGACCAGCCGGAACCGCTCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGACCGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTTCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGC]

[+] EMBL CNS0958T             [TTTTTTTTTTTTTCAACCGAAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCCCGCCAGTCCGGGCGGGGAAGATGCGCGTTTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG ACCTCCTGCGGCGTCGTCACCAGCACTGC GCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTC GCG GACAGATGCTCGTCGG ACGTGCCG GGCG GCGTATCCAGCAAAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGCGAATCATGCCGTTCTTCTTCGGCCCCCGCCAGAAGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGACATCAGGCTCAGATTGTCCTCGATGTACACCGGCGACCAGCCGGAACCGCTCTGGTGCACCTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGACCGCAGATGTCGATATCGAGCACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCACTGTTCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGCCAGCTTCTGC]
[+] EMBL CNS09A8J             [            TCAACCGGAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCTGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCCCGCCAGTCCGGGCGGGGAAGATGCGCGTCTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCG ACCTCCTGCGGCGTCGTCACCAGCACTGCTGCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTCTGCG GACAGATGCTCGTCtg t                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09HLG             [                                       TCGCCCTTTCCGTCGCCAAAAAACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAACTCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGCGGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCG CCGCCAGTCCGGGCGGGGAAGATGCGCGTTTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTTCTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCACGTCGAGCAGCGCGAACCTCCTGCGGCGTCGTCACCAGCACTGC GCCCCACGAACCGTCCGTCCCCTTGAGGAAGGTCGTC GCGCGACAGATGCTCGTCGGCACGTGCCGCGGCGCGCGTAT                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_9625#1 TTTTTTTTTTTTTCAACCGAAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAA AACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAAC TCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGC TGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCCCGCCAGT CCGGGCGGGGAAGATGCGCGTTTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTT CTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCAC GTCGAGCAGCGCGACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGT CCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAG CAAAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGCGAATCATGCCGTT CTTCTTCGGCCCCCGCCAGAAGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGA CATCAGGCTCAGATTGTCCTCGATGTACACCGGCGACCAGCCGGAACCGCTCTGGTGCAC CTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGACCGCAGATGTCGATATCGAG CACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCAC TGTTCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGC CAGCTTCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9625#0      CCGCCCGTGAATACAACCGGAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAA 60
consensus_9625#1      TTTTTTTTTTTTTCAACCGAAATGCAGTTTTATTGCCGTTCGCCCTTTCCGTCGCCAAAA 60
                             *   * ****** ****************************************

consensus_9625#0      AACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAAC 120
consensus_9625#1      AACTGTCTCACTTTCGTGACGATCTCCTCCAGCGCCACCACCGCCGGGCTGGTCGGGAAC 120
                      ************************************************************

consensus_9625#0      TCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGC 180
consensus_9625#1      TCGGTGATGAAATCTTTCCCCTCATCGCAGCACTTTGTGAGGCGCGGATCGAGCGGCAGC 180
                      ************************************************************

consensus_9625#0      TGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCC-GCCAGT 239
consensus_9625#1      TGGCCCAGGTACGGTACCTCCATCTCGATGCACATCTGTTCGGCGCCCCCGCCCGCCAGT 240
                      ***************************************************** ******

consensus_9625#0      CCGGGCGGGGAAGATGCGCGTCTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTT 299
consensus_9625#1      CCGGGCGGGGAAGATGCGCGTTTCGGTCGTGCACTTGGGGCACACGAACGCGCTCATGTT 300
                      ********************* **************************************

consensus_9625#0      CTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCAC 359
consensus_9625#1      CTCGATCACGCCCACCACCGGGATGGCAAGCTTCTTGCAGAACGATATCTCCTTGCGCAC 360
                      ************************************************************

consensus_9625#0      GTCGAGCAGCGCGACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGT 419
consensus_9625#1      GTCGAGCAGCGCGACCTCCTGCGGCGTCGTCACCAGCACTGCGCCCCACGAACCGTCCGT 420
                      ************************************************************

consensus_9625#0      CCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAG 479
consensus_9625#1      CCCCTTGAGGAAGGTCGTCGCGGACAGATGCTCGTCGGACGTGCCGGGCGGCGTATCCAG 480
                      ************************************************************

consensus_9625#0      CACAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGCGAATCATGCCGTT 539
consensus_9625#1      CAAAAGATAGTCCAGCTGTCCCCAGTCGACCTCGGTCAGGAACTGGCGAATCATGCCGTT 540
                      ** *********************************************************

consensus_9625#0      CTTCTTCGGCCCCCGCCAGATGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGA 599
consensus_9625#1      CTTCTTCGGCCCCCGCCAGAAGATTGCATCGTCCGGGCTGCCGAGCAGGAAGCCGATCGA 600
                      ******************** ***************************************

consensus_9625#0      CATCAGGCTCAGATTGTCCTCGATGTACACCGGCGACCAGCCGGAACCGCTCTGGTGCAC 659
consensus_9625#1      CATCAGGCTCAGATTGTCCTCGATGTACACCGGCGACCAGCCGGAACCGCTCTGGTGCAC 660
                      ************************************************************

consensus_9625#0      CTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGACCGCAGATGTCGATATCGAG 719
consensus_9625#1      CTGCTCACCGAGCACACCGAGCACGCGTGGCTGCGACGGACCGCAGATGTCGATATCGAG 720
                      ************************************************************

consensus_9625#0      CACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCAC 779
consensus_9625#1      CACGCCAAAGTTCTCGTCCGGGTTGCGGTGGGCCATGGCACGGGAGAGGAGCGCCGTCAC 780
                      ************************************************************

consensus_9625#0      TGTGCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGC 839
consensus_9625#1      TGTTCTCTTACCCACGCCACCCTTGCCGGACAGCACCAGCAGCTTGTTGCGCACGTCGGC 840
                      *** ********************************************************

consensus_9625#0      CAGCTTCTGCCGGACCAGTGCGATGGCCGGATCGGTCCTTTCGGACCGGTCGCACACAGC 899
consensus_9625#1      CAGCTTCTGC-------------------------------------------------- 850
                      **********                                                  

consensus_9625#0      TGCTGATTGGGGCAGCCGGCACACGCGGACGCTTTGCCCGCATCGTCGCTCTGTGTGCCG 959
consensus_9625#1      ------------------------------------------------------------
                                                                                  

consensus_9625#0      GGGCAGTGGGCTGGTGCATCGCTTGGAACGTCGGCACCACTGCTCATTGTGTGAAGAAAG 1019
consensus_9625#1      ------------------------------------------------------------
                                                                                  

consensus_9625#0      TAAAAGCGCGGAAAACAACACAAAACAGGGAAAATTCGTTTTTCGCAGCTCGCTGTGTAT 1079
consensus_9625#1      ------------------------------------------------------------
                                                                                  

consensus_9625#0      CGCTGCGTACGGCACGGCAGGCGG 1103
consensus_9625#1      ------------------------
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)