These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2016 fasta sequence [TTTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACACGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC-GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA-CCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATAAATAGAGTGTTATAAAAAA] [+] EMBL CNS08KLX [TTTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGGGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGG ] [+] EMBL BM625484 [ ccgGGACTTGTTTTAGTCTGGGGATTCCCGTG GCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACACGATGGGTCGCGTACGGTACTACACACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGACAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAGCCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTCGGGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACC ] [+] EMBL BX623486 [ GTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACACGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCAAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTACGTTCAGCCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCA ] [+] EMBL BM581377 [ ccGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGGTGTGCCTTTTGCTGCTGGAAGCTTCCTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCAGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCC ] [+] EMBL BM582986 [ ccgGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAGCCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTTCCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGTACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAAGATACGACAATATGCGACACCAAGGAGTACACGGTGGTT ] [+] EMBL BX621770 [ GCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCAAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGCTCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGNGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCA ] [+] EMBL BX606977 [ GTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCG ] [+] EMBL BX609257 [ CAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGGAGTTTGGTATCGTTTACGAAACCGCGC ] [+] EMBL AGA281914 [ CTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC GGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAG ] [+] EMBL BM642259 [ ccgcccacgCGTCCGCACCCTC GGAACCGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACGCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGCAACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGTTTGGTATCGTTTACGAAACCGCGCCAGGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCACGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCA ] [+] EMBL BX605252 [ GGATACGACAATATGCGACACCAAGGAGTACACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGC ] [+] EMBL BX625610 [ ACGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTAGTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGNCAGCAGCGCTACGTC ] [+] EMBL BX626628 [ ACCAACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGGCAGCAGCGCTACGTC ] [-] EMBL CNS08KLY [ ACCATAATAAGCTCGCATTGCTGCCAACGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGCTCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGACGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACA TGCGTAAGCAGCATACCGAAACGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAAC CGCTACGCGAACGATATTGCACTGATCCGG TGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAG TGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCACCCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATAAATAG ] [+] EMBL AL694307 [ cccangattAGACGATCTGTCAGGCGACACTGA TA CGATCTCTATCTAATTAGTGCTGCACACTGCGTAAGCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACTCTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCACTAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATATTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCTGCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGTGGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATC ] [-] EMBL AGA280219 [ GTCGACAGATCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCA CCGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGNTACGTCCTATACGGGTTGCTGTCGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAA] consensusID : consensus_9635#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 990 fasta sequence [GTCGCGTCGCTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTT-TGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTCGGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAAAAAAAA] [+] EMBL CNS09IQB [GTCGCGTCGCTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGCGCTTGTTGGTCGGACTTGTTTTAGTCTGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTCATTTCTTAGCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGCACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTCGTTCAACCGATCTGCCTT TGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTCGGAACTGTGATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTGAAGCACGTCTACCCGTCGTTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTCGCCACTCAGCTTACCGAGTCGGTCGAGTGCCAAAAGCTATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAAAAAAAA] [-] EMBL CNS09IQC [ GCTATTTGTGCCGGAGAGGGGCCAAAGATTATCAGTGTCTACACATGATGGGTCGCGTACGGTACTACGAACTCACGTTGGTTTCGATGTGCCTTTTGCTGCTGGCAGCTTCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGGAGGGCGACTGGCCATGGCATGTGGCACT TTTCACAAAAATCGCCGATCGTTCGAGTATGCGTGCGGTGGATCCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGATTAATCGCCAAAGAGCGACTTTTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGAATTCACGCCCGAGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAATCAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGAAATTACCTTCACGAACTTCGTTCAACCGATCTGCCTTGTGGAACCGGGGCGATGATCAGAGCTCC ] consensusID : consensus_9635#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 821 fasta sequence [TCGAGCAGAATCCCGAGGTTAACTAGAGCGCTTGCTCCCGTACGCGTACGACGTGCGCTATGTATGGTCGGACTTGTATTTAGTCTNGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTACATATTACTTAGCTATATTAGTGCCGGAGAGGGGCCACAAGATTATCAGTGTCTACACATGATGGGTACGCGTACGGTACTACGCACTCACGTATGGTTAACGATAGTGCCTATTATGCTGCTGGCAGCTATCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTCAACCTTCTGATTACAAATGGCTTACAGCTCAANGCGCAGGGCGACCTGGCCATGGCACTGTGGCACCTGTANATCACAAAAACAAATACCGCACCGATACCGATNACGGAANCTNACTTGACACGATAGCCGCGANNGGAATACCCAATATACTACGATTCAAACAAATAACGNACTANACANTAAACCGAGACCGACGACATCCAATAGCCTGCTGGCTATGGANTCCCACACACATGGAGGAACATNTCTAAACACTTCGCAGGCACCACACAACGAACAGGNAACGGGCCCGGANAACTAATACCTNAAGGGGCTTACGCCCCCANGCAGGTAGGAGNGCAAAACACAGACCCAACTGCANCACCAGGAGNACATTACCACCACGCGCACACAGACTTAGACGNACCAAAAAGGGCCCACTTATACACCAACACCGCGACCACCCCCCGGAANCANACGANCCCCCCAACTNAGAGCACACACNGCACACCATAAAACCGCAACAACCCTGCN] [+] EMBL AL694649 [TCGAGCAGAATCCCGAGGTTAACTAGAGCGCTTGCTCCCGTACGCGTACGACGTGCGCTATGTATGGTCGGACTTGTATTTAGTCTNGGGGATTCCCGTGGCAGCAGGGAGTTTCCGTGTGTGGTGGAGGCATTACATATTACTTAGCTATATTAGTGCCGGAGAGGGGCCACAAGATTATCAGTGTCTACACATGATGGGTACGCGTACGGTACTACGCACTCACGTATGGTTAACGATAGTGCCTATTATGCTGCTGGCAGCTATCTTCCCAAGCCCAAAACTGTGGCAAACGTAAGCAGGTCAACCTTCTGATTACAAATGGCTTACAGCTCAANGCGCAGGGCGACCTGGCCATGGCACTGTGGCACCTGTANATCACAAAAACAAATACCGCACCGATACCGATNACGGAANCTNACTTGACACGATAGCCGCGANNGGAATACCCAATATACTACGATTCAAACAAATAACGNACTANACANTAAACCGAGACCGACGACATCCAATAGCCTGCTGGCTATGGANTCCCACACACATGGAGGAACATNTCTAAACACTTCGCAGGCACCACACAACGAACAGGNAACGGGCCCGGANAACTAATACCTNAAGGGGCTTACGCCCCCANGCAGGTAGGAGNGCAAAACACAGACCCAACTGCANCACCAGGAGNACATTACCACCACGCGCACACAGACTTAGACGNACCAAAAAGGGCCCACTTATACACCAACACCGCGACCACCCCCCGGAANCANACGANCCCCCCAACTNAGAGCACACACNGCACACCATAAAACCGCAACAACCCTGCN] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9635#0 --------TTTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGC 52 consensus_9635#1 GTCGCGTCGCTGCTTCTCAGCACTACACTAGGCGCTTGCTCCCGTACGCGTACGACGTGC 60 consensus_9635#2 ----TCGAGCAGAATCCCGAGGTTAACTAGAGCGCTTGCTCCCGTACGCGTACGACGTGC 56 * ** * ** ***************************** consensus_9635#0 GCT-TGT-TGGTCGGACTTGT-TTTAGTCTGGGG-ATTCCCGTGGCAGCAGGGAGTTTCC 108 consensus_9635#1 GCT-TGT-TGGTCGGACTTGT-TTTAGTCTGGGG-ATTCCCGTGGCAGCAGGGAGTTTCC 116 consensus_9635#2 GCTATGTATGGTCGGACTTGTATTTAGTCTNGGGGATTCCCGTGGCAGCAGGGAGTTTCC 116 *** *** ************* ******** *** ************************* consensus_9635#0 GTGTGTGGTGGAGGCATT---CATTTCTTAGCTATTT--GTGCCGGAGAGGGGCCA-AAG 162 consensus_9635#1 GTGTGTGGTGGAGGCATT---CATTTCTTAGCTATTT--GTGCCGGAGAGGGGCCA-AAG 170 consensus_9635#2 GTGTGTGGTGGAGGCATTACATATTACTTAGCTATATTAGTGCCGGAGAGGGGCCACAAG 176 ****************** *** ********* * ***************** *** consensus_9635#0 ATTATCAGTGTCTACACACGATGGGT-CGCGTACGGTACTACGCACTCACGT-TGGTTT- 219 consensus_9635#1 ATTATCAGTGTCTACACATGATGGGT-CGCGTACGGTACTACGCACTCACGT-TGGTTT- 227 consensus_9635#2 ATTATCAGTGTCTACACATGATGGGTACGCGTACGGTACTACGCACTCACGTATGGTTAA 236 ****************** ******* ************************* ***** consensus_9635#0 CGGT-GTGCCTTTT--GCTGCTGGCAGCT-TCTTCCCAAGCCCAAAACTGTGGCAAACGT 275 consensus_9635#1 CGAT-GTGCCTTTT--GCTGCTGGCAGCT-TCTTCCCAAGCCCAAAACTGTGGCAAACGT 283 consensus_9635#2 CGATAGTGCCTATTATGCTGCTGGCAGCTATCTTCCCAAGCCCAAAACTGTGGCAAACGT 296 ** * ****** ** ************* ****************************** consensus_9635#0 AAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGG---AGGGCGAC-TGGCC 331 consensus_9635#1 AAGCAGGTAAACCTTCTGATTACAAATGGCTTAGAGTCAAAGG---AGGGCGAC-TGGCC 339 consensus_9635#2 AAGCAGGTCAACCTTCTGATTACAAATGGCTTACAGCTCAANGCGCAGGGCGACCTGGCC 356 ******** ************************ ** ** * ******** ***** consensus_9635#0 ATGGCA-TGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGAT 390 consensus_9635#1 ATGGCA-TGTGGCACTGTTTCACAACAATCGCCGATCGTTCGAGTATGCGTGCGGTGGAT 398 consensus_9635#2 ATGGCACTGTGGCACCTGTANATCACAAAAACAAATACCGCACCGATACCGATNACGGAA 416 ****** ******** * * **** * ** * ** * *** consensus_9635#0 CCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGAT 450 consensus_9635#1 CCATTCTCGATCAAAATACGATTTTAACGGCGGCTCACTGCCTGTGGTTGTCCAATGGAT 458 consensus_9635#2 NCTNACTTGACACGATAGCCGCGANNGGAATACCCAATATACTACGAT--TCAAACAAAT 474 * ** ** * * * * ** * * ** ** ** consensus_9635#0 TAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCA 510 consensus_9635#1 TAATCGCCAAAGAGCGACTTCTGGTGCAGGTGGGACGCAGCCGGCTCCGAGTGGCGAGCA 518 consensus_9635#2 AACGNACTANACANTAAA--CCGAGACCGACGACATCCAATAGCCTGCTGGCTATGGANT 532 * * * * * * * * * * * * ** * ** * * * consensus_9635#0 TTCACGCCCG-AGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAAT 569 consensus_9635#1 TTCACGCCCG-AGACCATGAAGCCTACGAACTGATCGTACATCCGAAGTACAACGTTAAT 577 consensus_9635#2 CCCACACACATGGAGGAACATNTCTAAACACTTCGCAGGCACCACACAACGAACAGGNAA 592 *** * * ** * * *** *** * ** * * *** * consensus_9635#0 CAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTC 629 consensus_9635#1 CAAATTGCGAACGATATCGCTCTGATCAAGCTTGCGACCGACATTACCTTCACGAACTTC 637 consensus_9635#2 CGGGCCCGGANAACTAATAC-CTNAAGGGGCTTACGCCC--CCANGCAGGTAGGAGNGCA 649 * ** ** * ** * **** ** ** * * * ** consensus_9635#0 GTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC 689 consensus_9635#1 GTTCAACCGATCTGCCTTTGGAACCGGGGCGATGATCAGAGCTCCATCGTTGGCACCCTC 697 consensus_9635#2 AAACA-CAGACCCAACTGCANCACCAGGAGNAC-ATTACCACCACG-CGCACACAGACTT 706 ** * ** * ** *** ** * ** * * * ** ** ** consensus_9635#0 GGAACCGT--GATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTG 747 consensus_9635#1 GGAACTGT--GATCGGGTTCGGCTATGACGAGACCGATAACCCTACGGATACGTTGCGTG 755 consensus_9635#2 AGACGNACCAAAAAGGGCCCACTTATA-------CACCAACACCGCGACCACCCCCCG-G 758 ** * *** * *** * *** * ** ** ** * consensus_9635#0 AAGCACGTCTACCCGTCG-TTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTC 806 consensus_9635#1 AAGCACGTCTACCCGTCG-TTAGCGCCATTGATTGTATCCAAAGCAACCGGGAAGCATTC 814 consensus_9635#2 AANCANACGANCCCCCCAACTNAGAGCACACACNGCACACCATAAAACCGCAACAACCCT 818 ** ** *** * * ** * * * * * ***** * consensus_9635#0 GCCACTCAGCTGACCTCGGATATGTTCTGTGCTGGCTATCGGAACGGGACCAGCCCCTGC 866 consensus_9635#1 GCCACTCAGCTTAC--CGAGTCGGTCGAGTGCCAAAAGCTATATCG--ACTGGATTCTGG 870 consensus_9635#2 GCN--------------------------------------------------------- 821 ** consensus_9635#0 AACGGTGACAGCGGTGGAGGGTTATTCTTCAACTTCAACAATGTCTGGTACATACGAGGT 926 consensus_9635#1 ATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACACTACAAAATACTCTATTT 930 consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 -TTGGTATCGTTTACGAAACCGCGCCAGGATACGACAA-TATGCGACACCAAGGAGTACA 984 consensus_9635#1 GTCGGTGCGATCTGTG----CGCAATAAATTATTTCATCTATGGAGTGTTATAAAAAAAA 986 consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 CGGTGTTTACCGATGTGGCAAAGTATCTGAGGTGGATCGAGCAGTACCTCCGTGCGTCTA 1044 consensus_9635#1 AAAA-------------------------------------------------------- 990 consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 GTGGTTTACCGATCTTAATCGACCTACAGACCAACCATAATAAGCTCGCATTGCTGCCAA 1104 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 CGTCCAAGTGCGGTCCTAATGCGTACGCTGGTCGTGATGAATCCTCCAAGCCGGTGCTGC 1164 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 TCGGTTATCCTTGGGTAGCCCTACTAGAATACACCGAGACGGGATCGCGCGAAAAGAAGA 1224 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 CGATCTGTCAGGCGACACTGATTAGCGATCTCTATCTAATTAGTGCTGCACACTGCGTAA 1284 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 GCAGCATACCGAAGCGATACACACTAACGTCCGCTCGGCTAGGAGAGTATGACAAAAACT 1344 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 CTATGACGGACTGTGTCGATATCGATGGACAAAGGGTCTGTTCGCCGCCGGTTCAATCAC 1404 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 TAAGCATCGAATCGTTGATTGTACACTCGGGCTTCAACAAACCGCGCTACGCGAACGATA 1464 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 TTGCACTGATCCGGCTGCGCGTCCGGGCAGACTTGAGCCGCAGCAACGTGAAGCCTATCT 1524 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 GCTTGCCCGTGACGAACGAGCTGCGCAGTCAGAAGCCGAGCCAGTACATCCTAACCGCGT 1584 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 GGTCGTCCGGTTCCGGTGGCAACGTACTGGAGCGTTCAATCAGCCAGCTTACCGAGTCGG 1644 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 TCGAGTGCCAAAAGCTGTACACCGAGCAGTCGGTTACGCTGGAGAAAACGAGTCGACAGA 1704 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 TCTGCATCAAGCAGCAGCAAGAGTCTGGCACACGTTGCAAGTTCCCGGCGTCGGCAGCAC 1764 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 CGCTGCAGCTTCTGCAGCCAGTGAACGGCCAGCAGCGCTACGTCCTATACGGGTTGCTGT 1824 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 CGTACGGGCCGAAAAGCTGCTCCGTGCTCTATCCAGACGTGTACACCAATGTGGCCAGCT 1884 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 ATATCGACTGGATTCTGGATAATATTCATGAGTAGTGGCGCCAATTTTGGCTAAAGAACA 1944 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 CTACAAAATACTCTATTTGTCGGTGCGATCTGTGCGCAATAAATTATTTCATAAATAGAG 2004 consensus_9635#1 ------------------------------------------------------------ consensus_9635#2 ------------------------------------------------------------ consensus_9635#0 TGTTATAAAAAA 2016 consensus_9635#1 ------------ consensus_9635#2 ------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||