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Anopheles gambiae
cluster # 9644 cluster # 9644       Sequences # 19       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9644#0 length = 966 sequences # 4  
consensus_9644#1 length = 691 sequences # 14  
consensus_9644#2 length = 497 sequences # 1  

consensusID : consensus_9644#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 966
fasta sequence
                              [CCGGCAATGCTCGCCAATCGGAAATTGCTACTTGGGCGCGCTCGGCTGTCAGTGTCAAAAGGCCATCTTGTTTTCTCGTTCTTTTTTCTGGTAGACACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCTGCCCTGTTCTTCGCCTGTTCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTTTATTTTTTGCTTCTACTATTCGCTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTTTTTTTTTGGCGCGATCGGTGTCGTTTAACTTTTAGAGGTGGTAGTAGTTTTCGAATTTTTTGTGTTCCGCAATGGGAAGATTCCTATTC]

[+] EMBL BM640910             [CCGGCAATGCTCGCCAATCGGAAATTGCTACTTGGGCGCGCTCGGCTGTCAGTGTCAAAAGGCCATCTTGTTTTCTCGTTCTTTTTTCTGGTAGACACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGT                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM576593             [                                                        ccgAGGCCATCTTGTTTTCTCGTTCTTTTTTCTGGTAGACACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGT                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08CHR             [                                                                                    TTTCTGGTAGACACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTTTGGCCCGCACCACCACCGGTGCCCGTTTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCTGCCCTGTTCTTCGCCTGTTCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTTTATTTTTTGCTTCTACTATTCGCTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTTTTTTTTTGGCGCGATCGGTGTCGTTTAACTTTTAGAGGTGGTAGTAGTTTTCGAATTTTTTGTGTTCCGCAATGGGAAGATTCCTATTC]
[+] EMBL CNS08R5F             [                                                                                                   GACGTGTAGAAAACGTGTTGAGCGTCTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGCCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTGCGGCGCCATGAAGGGTGCCGTCGATGGCGGAAAAAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCTGCCCTGTTCTTCGCCTGTGCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAc                                                                                                                                                            ]


>consensus_9644#0 CCGGCAATGCTCGCCAATCGGAAATTGCTACTTGGGCGCGCTCGGCTGTCAGTGTCAAAA GGCCATCTTGTTTTCTCGTTCTTTTTTCTGGTAGACACCGACGTGTAGAAAACGTGTTGA GCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGA AGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGA CCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGA AGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCC GCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCG TGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCC GCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCG AGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATG TGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCG ATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACA AGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCTGCCCTGTTCTTCGCCTGTTCG AAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTTTATTTTTTGCTTCTACTATTCG CTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTTTTTTTTTGGCGCGATCGGTGTCG TTTAACTTTTAGAGGTGGTAGTAGTTTTCGAATTTTTTGTGTTCCGCAATGGGAAGATTC CTATTC



consensusID : consensus_9644#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 691
fasta sequence
                              [CCGCGGACGCGTCCGCCCACGCGTCCG-CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC-GGTGCCCGTGTGTTCGGCGCCATG-AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGC-GGAAATGCACCGTGACCACATCTTCGGC]

[+] EMBL BM613244             [CCGCGGACGCGTGGGCGGACGCGT  G   G  GTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGC GGAAATGCACCGTGACCACATCTTCGGC]
[+] EMBL BM614925             [    GGACGCGTGGGCGGACGCGT GG GCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAA                                                                       ]
[+] EMBL BM599649             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGGAAATGCACCGTGACCA          ]
[+] EMBL BM613037             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACCGGGTGCCCGTGTGTTCGGCGCCATGTAAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGC GGAAATGCACCGTG              ]
[+] EMBL BM577311             [            CCGCGGACGCGTGGGACCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGC GGAAATGCACCGTGA             ]
[+] EMBL BM597848             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTC                                  ]
[+] EMBL BM625108             [            CCGCGGACGCGTGGG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGC G                           ]
[+] EMBL BM653801             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCG                                                ]
[+] EMBL BM623606             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGC                                                          ]
[+] EMBL BM619982             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGC GGAAATGCACCGTGACCACATC      ]
[+] EMBL BM608529             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAACAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGACTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGGCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACC                                                                                                                                                ]
[+] EMBL BM636711             [            CCGCGGACGCGTGGG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTG                                                                                                                                                                               ]
[+] EMBL BM611621             [            CCGCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTTGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCC                                                                                                                                                                                          ]
[+] EMBL BM648255             [            cgaCCCACGCGTCCG CCGACGTGTAGAAAACGTGTTGAGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTATGCCCGCAAGCGCCTGATTTTTCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGCCCGCACCACCACC GGTGCCCGTGTGTTCGGCGCCATG AAGGGTGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAACGCGGGAAATGCAC                  ]


>consensus_9644#1 CCGCGGACGCGTCCGCCCACGCGTCCGCCGACGTGTAGAAAACGTGTTGAGCGTTTCGTG TGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTGAAGAACAAGCA GTACTTCAAGCGTTATCAGGTCAGGTTCCGTCGCCGTCGCGAGGGCAAGACCGACTACTA TGCCCGCAAGCGCCTGATTTTCCAGGACAAAAACAAATACAACACGCCGAAGTTCCGGCT GATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCGTACGCCCGCATCGAGGG CGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCCACGTTACGGCGTGAAGGTTGG TCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGTCGCTCGCCGCATCCTGCA GAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGTGACCGGCGAGGAGTACCT GGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTACCTGGATGTGGGTCTGGC CCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGGTGCCGTCGATGGCGGACT GAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGCCGAGAACAAGAGCTTCAA CGCGGAAATGCACCGTGACCACATCTTCGGC



consensusID : consensus_9644#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence
                              [CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAAAGGAATAGGTTCAATCCACCATGGTGACGAAGAAGCCCGTCAAGAAGAAGGTTGTGCCGAAGCAGAAGGTGGCCCCGGCCCCGCTGGCCAAACCGAAAAAAGTTGAGGTTAAGAAGGTGGTGAACCCGTTGTTCGAGAAACGTGTTAAGAACTACGGCATCGGCCAGAATGTGCAGCCGAAGCGCGACCTGAGCCGGTTCGTCAAATGGCCGAAGTACATCCGCATCCAGCGCCACCGCGCGATCCTGCAGAAGCGGCTGAAGATCCCGCCGCCGATTAACCAGTTCACCCAGACGCTGGACAAGCCGACGGCCCAGCAGGTGATGAAGATGCTGGAGAAGTACCGCCCGGAGAACCCGATCGCTCGCGTCCAGCGCCTGAAGGCGAAGGCGGAAGCGAAGGCGGCCGGCAAGGAGGAACCGCCATCGAAGCGGGCCAACCA]

[+] EMBL BM580175             [CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAAAGGAATAGGTTCAATCCACCATGGTGACGAAGAAGCCCGTCAAGAAGAAGGTTGTGCCGAAGCAGAAGGTGGCCCCGGCCCCGCTGGCCAAACCGAAAAAAGTTGAGGTTAAGAAGGTGGTGAACCCGTTGTTCGAGAAACGTGTTAAGAACTACGGCATCGGCCAGAATGTGCAGCCGAAGCGCGACCTGAGCCGGTTCGTCAAATGGCCGAAGTACATCCGCATCCAGCGCCACCGCGCGATCCTGCAGAAGCGGCTGAAGATCCCGCCGCCGATTAACCAGTTCACCCAGACGCTGGACAAGCCGACGGCCCAGCAGGTGATGAAGATGCTGGAGAAGTACCGCCCGGAGAACCCGATCGCTCGCGTCCAGCGCCTGAAGGCGAAGGCGGAAGCGAAGGCGGCCGGCAAGGAGGAACCGCCATCGAAGCGGGCCAACCA]


>consensus_9644#2 CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAAAGGAA TAGGTTCAATCCACCATGGTGACGAAGAAGCCCGTCAAGAAGAAGGTTGTGCCGAAGCAG AAGGTGGCCCCGGCCCCGCTGGCCAAACCGAAAAAAGTTGAGGTTAAGAAGGTGGTGAAC CCGTTGTTCGAGAAACGTGTTAAGAACTACGGCATCGGCCAGAATGTGCAGCCGAAGCGC GACCTGAGCCGGTTCGTCAAATGGCCGAAGTACATCCGCATCCAGCGCCACCGCGCGATC CTGCAGAAGCGGCTGAAGATCCCGCCGCCGATTAACCAGTTCACCCAGACGCTGGACAAG CCGACGGCCCAGCAGGTGATGAAGATGCTGGAGAAGTACCGCCCGGAGAACCCGATCGCT CGCGTCCAGCGCCTGAAGGCGAAGGCGGAAGCGAAGGCGGCCGGCAAGGAGGAACCGCCA TCGAAGCGGGCCAACCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9644#0      CCGGCAATGCTCGCCAATCGGAAATTGCTACTTGGGCGCGCTCGGCTGTCAGTGTCAAAA 60
consensus_9644#1      ------------------------------------------------------------
consensus_9644#2      ------------------------------------------------------------
                                                                                  

consensus_9644#0      GGCCATCTTGTTTTCTCGTTCTTTTTTCTGGTAGACACCGACGTGTA-GAAAACGTGTTG 119
consensus_9644#1      -------CCGCGGACGCGTCCGC---CCACGCGTCCGCCGACGTGTA-GAAAACGTGTTG 49
consensus_9644#2      ----------------------CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCC 38
                                                 *  *    * ** *** **  *   *** **  

consensus_9644#0      AGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTG 179
consensus_9644#1      AGCGTTTCGTGTGTCGAAAATTTCCCAATTTAATTCGAAATGGGGTTCGTTAAGGTAGTG 109
consensus_9644#2      GCCCACGCGTCCGCGAAAGGAAT--AGGTTCAATCCACCATGGTGACGAAGAAGCCCGTC 96
                        *    ***  *   **    *     ** *** *   **** *      ***   ** 

consensus_9644#0      AAGAACAAG-CAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCG-CCGTCGCGAGGGCA 237
consensus_9644#1      AAGAACAAG-CAGTACTTCAAGCGTTATCAGGTCAGGTTCCGTCG-CCGTCGCGAGGGCA 167
consensus_9644#2      AAGAAGAAGGTTGTGCCGAAGCAGAAGGTGGCCCCGGCCCCGCTGGCCAAACCGAAAAAA 156
                      ***** ***   ** *   *   *      *  * **  ***  * **    ***    *

consensus_9644#0      AGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAG----GACAAAAACAAATACAAC 293
consensus_9644#1      AGACCGACTACTATGCCCGCAAGCGCCTGATTTTCCAG----GACAAAAACAAATACAAC 223
consensus_9644#2      GTTGAGGTTAAGAAGGTGGTGAACCCGTTGTTCGAGAAACGTGTTAAGAACTACGGCATC 216
                           *  **  * *   *  * * * *  **    *     *  ** *** *   ** *

consensus_9644#0      ACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCG 353
consensus_9644#1      ACGCCGAAGTTCCGGCTGATCGTTCGCCTGAGCAACCGCGACATCACCTGCCAGATCGCG 283
consensus_9644#2      GGCCAGAATGTGCAGCCGAAGCGCGACCTGAGC---CGGTTCGTCAAATGGCCGAA---G 270
                         * ***  * * ** **       *******   **   * ***  ** * **    *

consensus_9644#0      TACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCC-ACG 412
consensus_9644#1      TACGCCCGCATCGAGGGCGATCGCATCGTGTGCGCGGCCTACTCGCACGAGCTGCC-ACG 342
consensus_9644#2      TACATCCGCATCCAGCGCCACCGCGCGAT------------CCTGCAGAAGCGGCTGAAG 318
                      ***  ******* ** ** * ***    *            *  ***  *** **  * *

consensus_9644#0      TTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGT 472
consensus_9644#1      TTACGGCGTGAAGGTTGGTCTGACCAACTATGCCGCCGCCTACTGCACCGGTCTGCTCGT 402
consensus_9644#2      ATCCCGC-CGCCGATTAACCAGTTCACCCA-GACGCTGGACAAGCCGACGGCCCAGCAGG 376
                       * * **  *  * **   * *  ** * * * *** *   *   *  *** *     * 

consensus_9644#0      TGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGT 532
consensus_9644#1      CGCTCGCCGCATCCTGCAGAAGCTGCGCCTGGACACGCTGTACGCCGGCTGTACCGATGT 462
consensus_9644#2      TGATGA--AGATGCTGGAGAAGTACCGCCCGGAGAACCCGATCGCTCGCGTCCAGCGCCT 434
                       * *      ** *** *****   **** *** *  * *  ***  **          *

consensus_9644#0      GACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTA 592
consensus_9644#1      GACCGGCGAGGAGTACCTGGTCGAGCCGGTCGATGAAGGACCGGCCGCCTTCCGGTGCTA 522
consensus_9644#2      GAAGGCGAAGGCGGAAGCGAAGGCGGCCGGCAAGGAGGAACCGCCATCGAAGCGGGCCAA 494
                      **  *   *** * *   *   * * * * * * ** * **** *  *    ***  * *

consensus_9644#0      CCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGG 652
consensus_9644#1      CCTGGATGTGGGTCTGGCCCGCACCACCACCGGTGCCCGTGTGTTCGGCGCCATGAAGGG 582
consensus_9644#2      CCA--------------------------------------------------------- 497
                      **                                                          

consensus_9644#0      TGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGC 712
consensus_9644#1      TGCCGTCGATGGCGGACTGAACATTCCGCACTCGGTCAAGCGTTTCCCGGGCTACAGCGC 642
consensus_9644#2      ------------------------------------------------------------
                                                                                  

consensus_9644#0      CGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCTGCCCTGTTCTTCG 772
consensus_9644#1      CGAGAACAAGAGCTTCAACGCGGAAATGCACCGTGACCACATCTTCGGC----------- 691
consensus_9644#2      ------------------------------------------------------------
                                                                                  

consensus_9644#0      CCTGTTCGAAGGATGAGGCGTGCAAAAGAAAAAAAAAACATTCGTTTATTTTTTGCTTCT 832
consensus_9644#1      ------------------------------------------------------------
consensus_9644#2      ------------------------------------------------------------
                                                                                  

consensus_9644#0      ACTATTCGCTGAAGATAAACATTATGTTTGGACGCGGTGTGAGTTTTTTTTTGGCGCGAT 892
consensus_9644#1      ------------------------------------------------------------
consensus_9644#2      ------------------------------------------------------------
                                                                                  

consensus_9644#0      CGGTGTCGTTTAACTTTTAGAGGTGGTAGTAGTTTTCGAATTTTTTGTGTTCCGCAATGG 952
consensus_9644#1      ------------------------------------------------------------
consensus_9644#2      ------------------------------------------------------------
                                                                                  

consensus_9644#0      GAAGATTCCTATTC 966
consensus_9644#1      --------------
consensus_9644#2      --------------
                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)