These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 979 fasta sequence [TCCCAGTTAAACGGTGCGCCGCGCGTTCATCCCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG-TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC-GTT-CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG-CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA-CCGGTT-CGATGGGGCAGGCACTGGCAAAA-GGGAACCG-TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA-GGGGAGAAGAAAGTTGTT-AAGTTGGGTTTTACTTGTTATT-GTT-GTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTAAACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGTGGATCAAGCGACGAACAACTCTTTCATGTCGAACCGACACAATGAATTTCCCGTTTATTTGCACGAGACAGAAAGAGAGAGAGATGAAAGATAGTTCGTTGCTGTATGTAAATTAGAACGAACGTAGTGTAATAGAGCGTAAGGTATATGTAGCTACATGGGGTAGAATTATACTTCGCAAAAAAAGGTTTAATAAACTTGAGTTGTACTG] [+] EMBL AL932802 [TCCCAGTTAAACGGTGCGCCGCGCGTTCATCGCACGCAAGTGGCACACTTTGCGGGCTGC ATCGATCGAACTAAGTGCACG TTGGAGGAGTG TTCGTTTG TTGAGTTGTAATTTTAAG TTGGGTTTGTGT TTG TTGGAGC TTTATTTGCTGTTGNCCAAACACAATGTTCGCTTCCGGTTCCGAACCCACGCGT CTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGA GAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCGTTTTTTGGGCAAGCAGCACGAAAAGGTACTGACC ACTGGAAGAACGAC ACGGGGC GCGTCCTCAAAA ] [+] EMBL BM654801 [ CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCCGGTTCCGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTC ] [+] EMBL BM630215 [ CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAAGAGTGTTTCGTTTGTTTGAGGTGTAATTGGGGGCTGGGTTTTTTCTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCA GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAAGGGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTG ] [+] EMBL BM637935 [ CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGGGGAAGAAAGTTGTTAAAGTTGGGTTTTATTGGTTATTGGTTGGTGGTTCCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCA ] [+] EMBL BM648689 [ CCG GCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA GGGGAGAAAAAAGTTGTT AAGTTGGGTTTTACTTGGTATT GTT GTTGGTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGC ] [+] EMBL BM579108 [ ccgAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAAGAGTGTTTCGTTTGTTTGAGGTGTAATTTTAAGCTGGGTTTTTTCTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCA GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA GGGGAGAAGAAAGTTGTT AAGTTGGGTTTTACTTGTTATT GTT GTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATT ] [+] EMBL BM633108 [ ccgGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAG ] [+] EMBL BM623543 [ ccgAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAA ] [+] EMBL BX613299 [ TTTCGTTTGTTTGAGTTGTAACTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCC GTT CGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTG CATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAA CCGGTT CGATGGGGCAGGCACTGGCAAAA GGGAACCG TTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGA GGGGAGAAGAAAGTTGTT AAGTTGGGTTTTACTTGTTATT GTT GTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTCATAGATTATTGCAAAACAGTAAACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGTGGATCAAGCGACGAACAACTCTTTCATGTCGAACCGACACAATGAATTTCCCGTTTATTTGCACGAGACAGAAAGAGAGAGAGATGAAAGATAGTTCGTTGCTGTATGTAAATTAGAACGAACGTAGTGTAATAGAGCGTAAGGTATATGTAGCTACATGGGGTAGAATTATACTTCGCAAAAAAAGGTTTAATAAACTTGAGTTGTACTG] consensusID : consensus_9656#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 698 fasta sequence [CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT-TCGT-TTGTT-TGA-GTTGTAATTT-TAA-G-TT-GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGTTAGTGCAAAGAAGCGGCCCAAGTAGTAGCCCTTTGCTGGCACTGCTGTCTCACCCATTGCATAACCAACCACACAATGAATCCTTTCTCCTCGCGACAGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAATTGTTAAGTTGGGG] [+] EMBL BM651131 [CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT TCGT TTGTT TGA GTTGTAATTT TAA G TT GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGTTAGTGCAAAGAAGCGGCCCAAGTAGTAGCCCTTTGCTGGCACTGCTGTCTCACCCATTGCATAACCAACCACACAATGAATCCTTTCTCCTCGCGACAGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAATTGTTAAGTTGGGG] [+] EMBL BM577597 [CCGCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT TCGT TTGTT TGA GTTGTAATTT TAA G TT GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCTAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCAGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCG ] [+] EMBL BM636759 [ ccgACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTT TCGT TTGTT TGA GTTGTAATTT TAA G TT GGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAG ] [+] EMBL AL932234 [ cccgaggTTACGGGCTGC ATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTCTCGTNNTGTTNTGACGTTGTAATTTCNAACGCTTCGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTG ] consensusID : consensus_9656#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 632 fasta sequence [CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG-TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAATAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAAGCAGTGTGTGT--GTGTGAGGAGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTCGTAATTATTGGTGGTTCTTTTGCCATCAATCATTCCGATCAAGCT] [+] EMBL BM578793 [CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAATAATCACGTAACGGTTCAGCACGGCACGTCGCACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAAGCAGTGTGTGT GTGTGAGGAGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTCGTAATTATTGGTGGTTCTTTTGCCATCAATCATTCCGATCAAGCT] [+] EMBL BM576499 [CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAAGAGTGTTTCGTTTGTTTGAGGTGTAATTTTAAGCTGGGTTTTTTCTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGT ] [+] EMBL BM650114 [CCGCCCACGCGT C CGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTAAG TTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGT ] [-] EMBL CNS08X15 [ TTGGCTGTTGGTTGTCGGATGCGTCCTGTCTATGCCCGCGCAAGATTTTTCCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAATAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAGGCAGTGTGTGTGAGTGTGAGGGGAGAAGAAAGTTGTTAAGTTGGGTTTTACTT GTTATTgt ] consensusID : consensus_9656#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence [CCGCGGACGCGTGGGGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAAGTTGTTAAGTTGGGTTTTACTTGGTAATGGTAGCTGTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCAT] [+] EMBL BM584474 [CCGCGGACGCGTGGGGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACGGTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAACCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAAAAAGTTGTTAAGTTGGGTTTTACTTGGTAATGGTAGCTGTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCAT] consensusID : consensus_9656#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 485 fasta sequence [CGACCCACGCGTCCGGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTGTTATTGTTGTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCATGTCGAACCGACACAATGAATTTGCCGTTTATTTGCATGAGACAGAGAGGGAGAGATGAAACATAGTTTGTAGCTTTATGTAAATTAGAACGGTCGCAGTGTAATAGAGCGTAAGGTTCATGTAGCTACATGGGGTAGAATTATACTGCGCAGAAAAG] [+] EMBL BM627475 [CGACCCACGCGTCCGGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGAGTGTGAGGGGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTGTTATTGTTGTTGTTTCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTATTGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTGTGAGGTCCGTTACCAGAGGATCAAGCGACAAACAACTCTTTCATGTCGAACCGACACAATGAATTTGCCGTTTATTTGCATGAGACAGAGAGGGAGAGATGAAACATAGTTTGTAGCTTTATGTAAATTAGAACGGTCGCAGTGTAATAGAGCGTAAGGTTCATGTAGCTACATGGGGTAGAATTATACTGCGCAGAAAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9656#0 TCCCAGTTAAACGGTGCGCCGCGCGTTCATCCCGCGCAAGTGCCACACTTTGCGGGCTGC 60 consensus_9656#4 ------------------------------------------------------------ consensus_9656#3 ------------------------------------------------------------ consensus_9656#1 ------------------------------------------------------------ consensus_9656#2 ------------------------------------------------------------ consensus_9656#0 AATCGATCGAACTAAGTGCACGTTTGGAGGAGTGTTTCGTTTGTTTGAGTTGTAATTTTA 120 consensus_9656#4 ------------------------------------------------------------ consensus_9656#3 ------------------------------------------------------------ consensus_9656#1 ------------------------------------------------------------ consensus_9656#2 ------------------------------------------------------------ consensus_9656#0 AGTTGGTTTTTTGTGTTGTTTGGAGCTTTTAGTTGCTGTTGCCAAAACACAATGTCCGCT 180 consensus_9656#4 ------------------------------------------------------------ consensus_9656#3 ----------------------------------------------------------CC 2 consensus_9656#1 ------------------------------------------------------------ consensus_9656#2 ------------------------------------------------------------ consensus_9656#0 TCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTC 240 consensus_9656#4 ------------------------------------------------------------ consensus_9656#3 GCGGACGCGTGGGGCGCGTCCTGCTGGTGGGCAGTGATCTGTCTTTTGCTGCTGGTTGTC 62 consensus_9656#1 ----------------------------------------------------------CC 2 consensus_9656#2 ------------------------------------------------------------ consensus_9656#0 GGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGCGGACAAACCGCTCGGCGGA 300 consensus_9656#4 ------------------------------------------------------------ consensus_9656#3 GGATGCGTCCTGTCCATGCCCGCGCAAGAGGACACCCGGGTGGACAAACCGCTCGGCGGA 122 consensus_9656#1 GCGCAAGTGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGT 62 consensus_9656#2 -----CCGGCCACACTTTGCGGGCTGCAATCGATCGAACTAAGTGCACGTTTGGAGGAGT 55 consensus_9656#0 GTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGC 360 consensus_9656#4 ------------------------------------------------------------ consensus_9656#3 GTGCCGGACGCTGGCAGTGTGCATGAGGAGGTCGTCGTTGCAGCCGCACTGTACGTGCGC 182 consensus_9656#1 GTTTCGTTTGTTTGAGTTGTAATTTTAAGTTGGTTTTTTGTGTTGTTTGGAGCTTTTAGT 122 consensus_9656#2 GTTTCGTTTGTTTGAGTTGTAATTTTAAGTTGGTTTTTTGTGTTGTTTGGAGCTTTTAGT 115 consensus_9656#0 AAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACG 420 consensus_9656#4 ------------------------------------------------------------ consensus_9656#3 AAGAAGGATCCTACCACGCTGCGACGGCAGAAGCGTGAAATACGGAACAATCACGTAACG 242 consensus_9656#1 TGCTGTTGCCAAAACACAATGTCCGCTTCCGTTCGAGCCAGCGCGTCCTGCTGGTGGGCA 182 consensus_9656#2 TGCTGTTGCCAAAACACAATGTCCGCTTCAGTTCGAGCCAGCGCGTCCTGCTGGTGGGCA 175 consensus_9656#0 GTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAA 480 consensus_9656#4 -----------------------------------------------CGACCCACGCGTC 13 consensus_9656#3 GTTCAGCACGGCACGTCACACACGAACCGGTTCGATGGGGCAGGCACTGGCAAAAGGGAA 302 consensus_9656#1 GTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGAC 242 consensus_9656#2 GTGATCTGTCTTTTGCTGCTGGTTGTCGGATGCGTCCTGTCCATGCCCGCGCAAGAGGAC 235 * * * consensus_9656#0 CCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGGG-- 538 consensus_9656#4 CGGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAG-- 71 consensus_9656#3 CCGTTTTTGGGCAAGCAGCACGAAAAGGTACTGACCAACTGGAAGAACGACAACGGAG-- 360 consensus_9656#1 ACCCGGGCGGACAAACCGCTCGGCGGAGTGCCGGACG-CTGGCAGTGTGCATGAGGAGGT 301 consensus_9656#2 ACCCGGGTGGACAAACCGCTCGGCGGAGTGCCGGACG-CTGGCAGTGTGCATGAGGAGGT 294 ** *** * ** ** ** * * * **** ** * ** * consensus_9656#0 CGGCGT--CATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGA 596 consensus_9656#4 CGGCGT--CATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGA 129 consensus_9656#3 CGGCGT--CATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGTGTTCGTGTGTGTGA 418 consensus_9656#1 CGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAA 361 consensus_9656#2 CGTCGTTGCAGCCGCACTGTACGTGCGCAAGAAGGATCCTACCACGCTGCGACGGCAGAA 354 ** *** ** * * ** * * ****** ** * * * ** * * consensus_9656#0 GTGTGAGGGGAGAAGAAAGTTGTTAAGTTG----GGTTTTA-CTTGTTATTGTTGTTGTT 651 consensus_9656#4 GTGTGAGGGGAGAAGAAAGTTGTTAAGTTG----GGTTTTA-CTTGTTATTGTTGTTGTT 184 consensus_9656#3 GTGTGAGGGGAGAAAAAAGTTGTTAAGTTG----GGTTTTA-CTTGGTAATGGTAGCTGT 473 consensus_9656#1 GCGTGAAATACGGTTAGTGCAAAGAAGCGGCCCAAGTAGTAGCCCTTTGCTGGCACTGCT 421 consensus_9656#2 GCGTGAAATACGG----------------------------------------------- 367 * **** * consensus_9656#0 TCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTAT 711 consensus_9656#4 TCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTAT 244 consensus_9656#3 TCTTTTGCCATCAATCATTCCGATCAAGCTCGTACGCAAATCAATCAAGTTAAAGATTAT 533 consensus_9656#1 GTCTCACCCATTGCATAACCAACCACACAATGAATCCTTTCTCCTCGCGACAGGAACAAT 481 consensus_9656#2 ------------------------------------------------------AATAAT 373 * ** consensus_9656#0 TGCAAAACAGTAAACCTTTGACTAGTTTCCCAGGTTTTT-GTGAGGTCCGTTACCAGTGG 770 consensus_9656#4 TGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTT-GTGAGGTCCGTTACCAGAGG 303 consensus_9656#3 TGCAAAACAGTGGACCTTTGACTAGTTTCCCAGGTTTTTTGTGAGGTCCGTTACCAGAGG 593 consensus_9656#1 CACGTAACGGTTCAGCAC-GGCACGTCACACACGAACC------GGTTCGATGGGGCAGG 534 consensus_9656#2 CACGTAACGGTTCAGCAC-GGCACGTCACACACGAACC------GGTTCGATGGGGCAGG 426 * *** ** * * * * ** * ** * *** ** * ** consensus_9656#0 ATCAAGCGACGAACAACTCTTTCATGTCGAACCGACACAATGAATTTCCCGTTTATTTGC 830 consensus_9656#4 ATCAAGCGACAAACAACTCTTTCATGTCGAACCGACACAATGAATTTGCCGTTTATTTGC 363 consensus_9656#3 ATCAAGCGACAAACAACTCTTTCAT----------------------------------- 618 consensus_9656#1 CACTGGCAAAAGGGAACCGTTTT-TGGGCAAGCAGCACGA-AAAGGTACTGACCAACTGG 592 consensus_9656#2 CACTGGCAAAAGGGAACCGTTTT-TGGGCAAGCAGCACGA-AAAGGTACTGACCAACTGG 484 * ** * *** *** * consensus_9656#0 ACGA--GACAGAAAGAGAGAGAGATGAAAGATAGTTCGTTGCTGTATGTAAATTAGAACG 888 consensus_9656#4 ATGA--GACAGA--GAGGGAGAGATGAAACATAGTTTGTAGCTTTATGTAAATTAGAACG 419 consensus_9656#3 ------------------------------------------------------------ consensus_9656#1 AAGAACGACAACGGGGCGGCGTCATCAAAAGTGGGCCTCCGCAAGGAGTAGGCAGTGTGT 652 consensus_9656#2 AAGAACGACAACGGAGCGGCGTCATCAAAAGTGGGCCACCGCAAGGAGTAAGCAGTGTGT 544 consensus_9656#0 AACGTAGTGTAATAGAGCGTAAGGTATATGTAGCTACATGGGGTAGAATTATACTTCGCA 948 consensus_9656#4 GTCGCAGTGTAATAGAGCGTAAGGTTCATGTAGCTACATGGGGTAGAATTATACTGCGCA 479 consensus_9656#3 ------------------------------------------------------------ consensus_9656#1 GTT--CGTGTGTGTGAGTGTGAGGGGAGAAAAAA-TTGTTAAGTTGGGG----------- 698 consensus_9656#2 GT--------------GTGTGAGGAGAGAAGAAAGTTGTTAAGTTGGGTTTTACTTCGTA 590 consensus_9656#0 AAAAAAGGTTTAATAAACTTGAGTTGTACTG----------- 979 consensus_9656#4 GAAAAG------------------------------------ 485 consensus_9656#3 ------------------------------------------ consensus_9656#1 ------------------------------------------ consensus_9656#2 ATTATTGGTGGTTCTTTTGCCATCAATCATTCCGATCAAGCT 632 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||