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Anopheles gambiae
cluster # 9660 cluster # 9660       Sequences # 19       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9660#0 length = 1043 sequences # 17  
consensus_9660#1 length = 627 sequences # 1  
consensus_9660#2 length = 493 sequences # 1  

consensusID : consensus_9660#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1043
fasta sequence
                              [TCTGATGGTAGTTTTGTGTAGATAAGTCATTTTCATTGTTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAG-GCAATTACAGCCACT-GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT--GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA-TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT-GGACGTTATCAATCAAGCTTGG--ACAG-CATTATATGATTT-GT-CCAATA-TTTTTGAGTCGTT-CTTA-CCCCAACTAC-TTACGTAT-CCTAATCCAGTAGACCCTCTG-AACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAGCTGATTATGTCAGAAGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCCAACAGAAAGTTCTGATAGTGAAAGCAGCATGTCTGACTTCAGCGAAGACGAGGCACA-GGATATGGAGTTATAACGTCGGCTATCATTACACAGAGCTAGTAGAAGTGTTAGTAATGTAATTTTCCCTAAAAATCAACTATTATTCATGTTTTTGGAATCTGTCACTTGTTAGCTATGCGAGGTACATTACATATTAGCAAGGTTATTATTTTCTCGATCATAATAATTTTTCTGTGAAGATTAGAAATAAAATTTCAAAACTATTC-TTTCATAGTAGCGTTCATTAGTTCTTAAATGTAGTTACGTGTGTGAAATACTGAATTAAAAATAG]

[+] EMBL CNS08FZG             [TCTGATGGTAGTTTTGTGTAGATAAGTCATTTTCATTGTTTGGCTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX619486             [   GATGGTAGTTTTGTGTAGATAAGTCATTTTCATTGTTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGTCACTCAACATGCCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATATTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGANGGANGTGTATGGANAGTACGTGTACATTTACCGGAACATNACCCGTNTAAATCNCCAAGCATCGGATTTATCAACAAAATCTANCACCCCAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX602173             [   GATGGTAGTTTTGTGTAGATAAGTCATTTTCATTGTTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CATTATATGATTT GT CCAATA TTTTTGAGTCGTT CTTA CCCCAACTAC TTACGTAT CCTAATCCAGTAGACCCTCTG AACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAGCTGATTATGTCAGAAGAT                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM577925             [       ccgGTTTTGTGTAGATAAGTCATTTTCATTGTTTGGCTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CCTTATATGATTT GT CCAATA TTTTTGAGTCGTT CTTA CCCCAACTAC TTACGTAT CCTAATCCAGTAGACCCTCTGCAACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAGCTGATTATGTCAGAAGATACGCTACTGgaa                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM582705             [       ccgGTTTTGTGTAGATAAGTCATTTTCATTGTTTGGCTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CCTTATATGATTT GT CCAATA TTTTTGAGTCGTT CTTA CCCCAACTAC TTACGTAT CCTAATCCAGTAGACCCTCTG AACcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX603578             [                  TAGATAAGTCATTTTCATTGTTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX619675             [                             TTTTCATTGTTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX625142             [                                 CATTGTTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATTTGGGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CATTATATGATTT GT CCAATA TTTTTGAGTCGTT CTTA CCCCAACTAC TTACGTAT CCTAATCCAGTAGACCCTCTG AACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAGCTGATTATGTCAGAAGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCCAACAGAAAGTTCTGATAGTGAAAGCAGCATGTCTGACTTCAGCGAAGACGANGCACA GGATATGGAGTTATAACGTCGGCTATCATTACACAGAGCTAGTAGAAGTGTTAGTAATGTAATTTTCCCTAAAAATCAACTATTATTCATGGTTTTGGAAT                                                                                                                                                                              ]
[+] EMBL BM623154             [                                              ccGGTAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CCTTATATGATTT GT C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS099ZJ             [                                                  TAATGTTTTGTTCTGCTTGTGACAG GCAATTACAGCCACT GACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX624219             [                                                                    GTGACAGNGCAATTACAGCCACTAGACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAATTTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATNTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCANGAACAGTTTGTCT GGACGTTATCAATCAAGCTNGG  ACAG CATTATATGATNT GT CCAATA TTTTTGAGTCGTT CTTA NNNCNACTAC TTACGTAT NCTAATCCAGTAGACCCTCTG AACGGTGATGCAGCTGCAATGTACCTGCATAANCCTGAAGAATATCGCNAGAAAGTAGCTGATNATGTCAGANGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCC ACAGAAAGTTCTGATAGTGAAAGCAGCATGTCTGACnna                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX622358             [                                                                                                                       ATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CATTATATGATTT GT CCAATA TTTTTGAGTCGTT CTTA CCCCAACTAC TTACGTAT CCTAATCCAGTAGACCCTCTG AACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAGCTGATTATGTCAGAAGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCCAACAGAAAGTTCTGATAGTGAAAGCAGCATGTCTGACTTCAGCGAAGACGAGGCACANGGATATGGAGTTATAACGTCGGCTATCATTACACAGAGCTAGTAGAAGTGGTAG                                                                                                                                                                                                                             ]
[+] EMBL BM626323             [                                                                                                                      ccgGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATT  GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CCTTATATGATTT GT CCAATA TTTTTGAGTCGTT CTTA CCCCAACTAC TTACGTAT CCTAATCCAGTAGACCCTCTG AACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAGCTGATTATGTCAGAAGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCCAACAGAAAGTTCTGATAGTGAAAGCAGCATGTCTGACTTCAGCGAAGACGAGGCACA GGATATGGAGTTATAACGTCGGCTATCATTACACAGAGCT                                                                                                                                                                                                                                           ]
[+] EMBL BX619297             [                                                                                                                                                                                                      AACGTTATT  GGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTACCCGTTTAAATCACCAAGCATCGGA NTATC ACANNATCTACCACCCAAATATNGACGAAGTATCAGGAACAGTTGGTCTGGGACGTTATCAATCCAGCCTGGGNACAGCCCTTATATGATTTGGTCCCAATATTTTTTGAGTCGTTCCTNACCCCCAACTACTTTACGTATCCCTANTCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM595470             [                                                                                                                                                                                                                                                                                                                                                                                                   ccgATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTTGTCT GGACGTTATCAATCAAGCTTGG  ACAG CATTATATGATTT GT CCAATA TTTTTGAGTCGTT CTTA CCCCAACTAC TTACGTAT CCTAATCCAGTAGACCCTCTG AACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAGCTGATTATGTCAGAAGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCCAACAGAAAGTTCTGATAGTGAAAGCAGCATGTCTGACTTCAGCGAAGACGAGGCACA GGATATGGAGTTATAACGTCGGCTATCATTACACAGAGCTAGTAGAAGTGTTAGTAATGTAATTTTCCCTAAAAATCAACTATTATTCATGTTTTTGGAATCTGTCACTTGTTAGCTATGTGAGGTACATTACATATTAGCAAGGTTATTATTTTCTCGATCATAATAATTTTTCTGTGAAGATTAGAAATAAAATTTCAAAACTATTCTTTTCATAGTAGCGTTCATTAGTTCTTAAATGTAGTTACGTGTGTGAAATACTTAATTA       ]
[-] EMBL CNS099ZK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTTCAGCGAAGACGAGGCACA GGATATGGAGTTATAACGTCGGCTATCATTACACAGAGCTAGTAGAAGTGTTAGTAATGTAATTTTCCCTAAAAATCAACTATTATTCATGTTTTTGGAATCTGTCACTTGTTAGCTATGCGAGGTACATTACATATTAGCAAGGTTATTATTTTCTCGATCATAATAATTTTTCTGTGAAGATTAGAAATAAAATTTCAAAACTATTC TTTCATAGTAGCGTTCATTAGTTCTTAAATGTAGTTACGTGTGTGAAATACTG            ]
[-] EMBL CNS08FZH             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         gggtTTATTACGTCGGCTTTCATTACACAGAGCTAGTAGAAGTGTTAGTAATGTAATTTTCCCTAAAAATCAACTATTATTCATGTTTTTGGAATCTGTCACTTGTTAGCTATGCGAGGTACATTACATATTAGCAAGGTTATTATTTTCTCGATCATAATAATTTTTCTGTGAAGATTAGAAATAAAATTTCAAAACTATTC TTTCATAGTAGCGTTCATTAGTTCTTAAATGTAGTTACGTGTGTGAAATACTGAATTAAAAATAG]


>consensus_9660#0 TCTGATGGTAGTTTTGTGTAGATAAGTCATTTTCATTGTTTGACTAATGGTAATGTTTTG TTCTGCTTGTGACAGGCAATTACAGCCACTGACGCCTTACATGTTGTGTTGGGATTAATG CCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCAT TCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGGCACTCAACATGT CTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTA AACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAATTTTTTGGTCCAC GAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACC CGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAG TATCAGGAACAGTTTGTCTGGACGTTATCAATCAAGCTTGGACAGCATTATATGATTTGT CCAATATTTTTGAGTCGTTCTTACCCCAACTACTTACGTATCCTAATCCAGTAGACCCTC TGAACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAAGAAAGTAG CTGATTATGTCAGAAGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCCAACAGAAA GTTCTGATAGTGAAAGCAGCATGTCTGACTTCAGCGAAGACGAGGCACAGGATATGGAGT TATAACGTCGGCTATCATTACACAGAGCTAGTAGAAGTGTTAGTAATGTAATTTTCCCTA AAAATCAACTATTATTCATGTTTTTGGAATCTGTCACTTGTTAGCTATGCGAGGTACATT ACATATTAGCAAGGTTATTATTTTCTCGATCATAATAATTTTTCTGTGAAGATTAGAAAT AAAATTTCAAAACTATTCTTTCATAGTAGCGTTCATTAGTTCTTAAATGTAGTTACGTGT GTGAAATACTGAATTAAAAATAG



consensusID : consensus_9660#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 627
fasta sequence
                              [AGGCAGAATCGGCACGATGGTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAGGCAATTACAGCCACTGACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAATTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCAAATATTGACGAAGTATCAGGAACAGTGTCTGTCTGGACGTGATCAATCAAGCTTGGACAGCATTATCATGATTTGGTCCAATCATCTCTGAGTCGTTCTTTACCCCAAACTACTTTAACGGTAATCCCTAATCCAAGTTANGACCCTTCTTGAAACCGGTGAATGCAGCTGGCAAATGGT]

[+] EMBL BX468116             [AGGCAGAATCGGCACGATGGTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAGGCAATTACAGCCACTGACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCTTGGTGGTTTGAATGAATTTTGTGTAAAATTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCAAATATTGACGAAGTATCAGGAACAGTGTCTGTCTGGACGTGATCAATCAAGCTTGGACAGCATTATCATGATTTGGTCCAATCATCTCTGAGTCGTTCTTTACCCCAAACTACTTTAACGGTAATCCCTAATCCAAGTTANGACCCTTCTTGAAACCGGTGAATGCAGCTGGCAAATGGT]


>consensus_9660#1 AGGCAGAATCGGCACGATGGTTGACTAATGGTAATGTTTTGTTCTGCTTGTGACAGGCAA TTACAGCCACTGACGCCTTACATGTTGTGTTGGGATTAATGCCTGGCGACGTCGTTTGCA TTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAAC GTTATTGGAAACCAAACATTACCCTGCGTCACTCAACATGTCTTCTCCAAGTGCAGGCAA ACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGTAAACACGAAGTCACTATTCT TGGTGGTTTGAATGAATTTTGTGTAAAATTTTTTGGTCCACGAGGCACGCCATACGAAGG AGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTACCCGTTTAAATCACCAAGCAT CGGATTTATCAACAAAATCTACCACCAAATATTGACGAAGTATCAGGAACAGTGTCTGTC TGGACGTGATCAATCAAGCTTGGACAGCATTATCATGATTTGGTCCAATCATCTCTGAGT CGTTCTTTACCCCAAACTACTTTAACGGTAATCCCTAATCCAAGTTANGACCCTTCTTGA AACCGGTGAATGCAGCTGGCAAATGGT



consensusID : consensus_9660#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 493
fasta sequence
                              [AGATCGCCCGAGGTTTCTGCTTGTGACAGGCAATTACAGCCACTGTACGCCTTACATGTGTGTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGCTGGTTNGAATGAATTTGTGTAAAATTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTGTCTGGACGTTATCAATCAAGCTTGGACAGCCTTATATGATTTGTC]

[+] EMBL AL931064             [AGATCGCCCGAGGTTTCTGCTTGTGACAGGCAATTACAGCCACTGTACGCCTTACATGTGTGTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCATTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGGCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGTAAACACGAAGTCACTATTCTTGGCTGGTTNGAATGAATTTGTGTAAAATTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGAAGTATCAGGAACAGTTGTCTGGACGTTATCAATCAAGCTTGGACAGCCTTATATGATTTGTC]


>consensus_9660#2 AGATCGCCCGAGGTTTCTGCTTGTGACAGGCAATTACAGCCACTGTACGCCTTACATGTG TGTGGGATTAATGCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGG GATATATTAGCATTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCG GCACTCAACATGTCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAA TTGATAGAAAGTAAACACGAAGTCACTATTCTTGGCTGGTTNGAATGAATTTGTGTAAAA TTTTTTGGTCCACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTA CCAGAACATTACCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCA AATATTGACGAAGTATCAGGAACAGTTGTCTGGACGTTATCAATCAAGCTTGGACAGCCT TATATGATTTGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9660#0      TCTGATGGTAGTTTTGTGTAGATAAGTCATTTTCATTGTTTGACTAATGGTAATGTTTTG 60
consensus_9660#2      ----------------------------------------AGATCGCCCGAGGT------ 14
consensus_9660#1      -------------------AGGCAGAATCGGCACGATGGTTGACTAATGGTAATGTTTTG 41
                                                               **      *   *      

consensus_9660#0      TTCTGCTTGTGACAGGCAATTACAGCCACTG-ACGCCTTACATGTTGTGTTGGGATTAAT 119
consensus_9660#2      TTCTGCTTGTGACAGGCAATTACAGCCACTGTACGCCTTACATGT-GTGT-GGGATTAAT 72
consensus_9660#1      TTCTGCTTGTGACAGGCAATTACAGCCACTG-ACGCCTTACATGTTGTGTTGGGATTAAT 100
                      ******************************* ************* **** *********

consensus_9660#0      GCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCA 179
consensus_9660#2      GCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCA 132
consensus_9660#1      GCCTGGCGACGTCGTTTGCATTCAGCCTACAATTCAGACATATTCAGGGATATATTAGCA 160
                      ************************************************************

consensus_9660#0      TTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGGCACTCAACATG 239
consensus_9660#2      TTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGGCACTCAACATG 192
consensus_9660#1      TTCGTGCTAAATAGAACAACGTTATTGGAAACCAAACATTACCCTGCGTCACTCAACATG 220
                      ************************************************ ***********

consensus_9660#0      TCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGT 299
consensus_9660#2      TCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTGATAGAAAGT 252
consensus_9660#1      TCTTCTCCAAGTGCAGGCAAACGCCGTATGGACACAGATGTCATCAAATTAATAGAAAGT 280
                      ************************************************** *********

consensus_9660#0      AAACACGAAGTCACTATTCTTGG-TGGTTTGAATGAATTTTGTGTAAAATTTTTTGGTCC 358
consensus_9660#2      AAACACGAAGTCACTATTCTTGGCTGGTTNGAATGAATTT-GTGTAAAATTTTTTGGTCC 311
consensus_9660#1      AAACACGAAGTCACTATTCTTGG-TGGTTTGAATGAATTTTGTGTAAAATTTTTTGGTCC 339
                      *********************** ***** ********** *******************

consensus_9660#0      ACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTA 418
consensus_9660#2      ACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCAGAACATTA 371
consensus_9660#1      ACGAGGCACGCCATACGAAGGAGGTGTATGGAAAGTACGTGTTCATTTACCGGAACATTA 399
                      *************************************************** ********

consensus_9660#0      CCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGA 478
consensus_9660#2      CCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACCCAAATATTGACGA 431
consensus_9660#1      CCCGTTTAAATCACCAAGCATCGGATTTATCAACAAAATCTACCACC-AAATATTGACGA 458
                      *********************************************** ************

consensus_9660#0      AGTATCAGGAACAGT--TTGTCTGGACGTTATCAATCAAGCTTGGACAGCATTAT-ATGA 535
consensus_9660#2      AGTATCAGGAACAGT--T-GTCTGGACGTTATCAATCAAGCTTGGACAGCCTTAT-ATGA 487
consensus_9660#1      AGTATCAGGAACAGTGTCTGTCTGGACGTGATCAATCAAGCTTGGACAGCATTATCATGA 518
                      ***************    ********** ******************** **** ****

consensus_9660#0      TTTG-TCCAAT-ATTTTTGAGTCGTTCTT-ACCCCAACTACTTACGTATCCTAATCCAGT 592
consensus_9660#2      TTTG-TC----------------------------------------------------- 493
consensus_9660#1      TTTGGTCCAATCATCTCTGAGTCGTTCTTTACCCCAAAC-------TACTTTAA--CGGT 569
                      **** **                                                     

consensus_9660#0      AGACCCTCTGAACGGTGATGCAGCTGCAATGTACCTGCATAAACCTGAAGAATATCGCAA 652
consensus_9660#2      ------------------------------------------------------------
consensus_9660#1      AATCCCT---------AATCCAA--GTTANGACCCTTCTTGAAACCGGTGAATGCAGCTG 618
                                                                                  

consensus_9660#0      GAAAGTAGCTGATTATGTCAGAAGATACGCTACTGAAGAAGCTCTGCGGGAACAAGATCC 712
consensus_9660#2      ------------------------------------------------------------
consensus_9660#1      GCAAATGGT--------------------------------------------------- 627
                                                                                  

consensus_9660#0      AACAGAAAGTTCTGATAGTGAAAGCAGCATGTCTGACTTCAGCGAAGACGAGGCACAGGA 772
consensus_9660#2      ------------------------------------------------------------
consensus_9660#1      ------------------------------------------------------------
                                                                                  

consensus_9660#0      TATGGAGTTATAACGTCGGCTATCATTACACAGAGCTAGTAGAAGTGTTAGTAATGTAAT 832
consensus_9660#2      ------------------------------------------------------------
consensus_9660#1      ------------------------------------------------------------
                                                                                  

consensus_9660#0      TTTCCCTAAAAATCAACTATTATTCATGTTTTTGGAATCTGTCACTTGTTAGCTATGCGA 892
consensus_9660#2      ------------------------------------------------------------
consensus_9660#1      ------------------------------------------------------------
                                                                                  

consensus_9660#0      GGTACATTACATATTAGCAAGGTTATTATTTTCTCGATCATAATAATTTTTCTGTGAAGA 952
consensus_9660#2      ------------------------------------------------------------
consensus_9660#1      ------------------------------------------------------------
                                                                                  

consensus_9660#0      TTAGAAATAAAATTTCAAAACTATTCTTTCATAGTAGCGTTCATTAGTTCTTAAATGTAG 1012
consensus_9660#2      ------------------------------------------------------------
consensus_9660#1      ------------------------------------------------------------
                                                                                  

consensus_9660#0      TTACGTGTGTGAAATACTGAATTAAAAATAG 1043
consensus_9660#2      -------------------------------
consensus_9660#1      -------------------------------
                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)