These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1008 fasta sequence [AATTCCTCGAGAACTGTTGGCCTACTGGACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC--AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA-CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC-GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC-ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA--GAGTGAGTGGGTGAGTGAGTGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACGAAAAAAACAAACAAAAAAAAAAAAGGCCA] [-] EMBL CNS08OTD [AATTCCTCGAGAACTGTTGGCCTACTGGACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATAACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGAACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCT GACGATGCCGCACGCCAGCGACGCGCG GCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTtacttc ] [+] EMBL CNS09PGS [ TGCGATG AATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGC CTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGTTTGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGA GCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGT ] [+] EMBL CNS099BC [ tggGCGATGCAATAAATTGGTG AATAACAATCTTTCGGCGATTAGTTTATCGTGAAATCGTTGATAAAATAACGCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTG CGAAG CGTAGCACTCACTACCACCCCCTAAAAACAGTCTCATAAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGCATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGC CTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCGCGAAAGGGGCCGAATACTATCGTGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAACAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCAGTGTGTGGATTTCCCT CAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGCTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTTGTTGAGTGAGTGTGCCGGAAAGGAAAGGTATATTATAATAAACTGAAATC ] [-] EMBL CNS09PGT [ CAATAAATTGGTGAAATAACAATCTTTCGGCGTTTTTTTTTTCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATTACTGGGGAAGAAGTTTTTCATACAAGATTTGGACGAGAAAAACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGAACTTACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGCGCTGGAAGAACTCGAGCAGGACAACTTCCACGAAGACCCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGAAAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTTAGTGCCGCTGAACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGAAACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAA ] [+] EMBL CNS08OTC [ ttcttaggAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCT GACGATGCCGCACGCCAGCGACGCGCGCGCAAA GCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAATGAAAAAAACAAACAAAAAAAAAAAAGGCCA] [+] EMBL CNS09HJL [ TTGGTG AATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGC CTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTAC ] [-] EMBL CNS099BD [ GTTTATCGTGAAATCGTTGATAAAATAACGCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATC TACAAGATTTGGACGAGAAGCACCTATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTG CGAAGCCGTAGAACTCACTACCACCCCCTAAAAACAGTCTCATAAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGCATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCGCGAAAGGGGCCGAATACTATCGTGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAACAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCAGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGACAACGCGCTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGTTGAGTGAGTGTGCCGGAAAGGAAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACGAAAAAAACAAAa ] [+] EMBL BX625174 [ AACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAACGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGCGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTG ] [-] EMBL CNS09HJM [ GGCGTGCTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGAACTCACTACTAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGC CGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAGGAC ACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTA GAGTGAGTGGGTGAGTGAGAGTGCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCT ] [+] EMBL AGA285159 [ AAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAACGACGCGCGCG ] [+] EMBL AGA284893 [ TCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGTTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC ] [+] EMBL BX612883 [ CTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTC AAACTCAACTCCAACAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAACGACGCGCGCGCAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGA CCCGCACGCGGACCTGGTCATGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGCGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCTTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGGTGCTTGAAATGGACCGCCTAGAGGACTAAGTGAGTGAGTGAGTGAGTGAGTGTGCCAGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCT ] [-] EMBL AGA283866 [ AATTCAGCGACAATCTCGATGGCAGCGGACCGAGCAAGAAGAAACACCCCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAAC GGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGGGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGGTGCTTGAAATGGACCGCCTAGAGGACTAAGTGAGTGAGTGAGTGAGTGAGTGTGCCAGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACAAAA ] [-] EMBL CNS09BA9 [ TGGCAGTGGACCGAGCAAGAAGAAACACCGCCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGCAGCTGCTGGATGAGGAACGGGCAGCAGCGACCGGATCCGCCGAACTATTTCAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGATACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTATACGTGCACTGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCA ] [-] EMBL AGA283604 [ CAGTGCCGCTGCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGCTACACGTGCACGGCTTGCGNGACGCGGTACTGCTGCGTACGGTGCTTGGGTACGCATCAGGAC ACGCGGTGCTTGAAATGGACCGCCTAGAGGACTAAGTGAGTGAGTGAGTGAGTGAGTGTGCCAGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACAAAA ] consensusID : consensus_9667#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 961 fasta sequence [ACTCNCCCCGCCGGTTTTAACGCAATCACTGGGNGCAAGAACGTTTATCATACAACGCATTTGGACGACGACTGCACCTGTTCATTTCTGTGTCGAAATCTGTCGAAGTACTGCAATGCCCTGCGTGGACGATTTGATGGACCGCATCAGCTTCCCTGCTACACTGAGCAAAGAATGCTTAAAAACATACCATCCTTGCCTGAATGCCCGTAGCAACTCACCTACCAACCTTGTAANACCAAACACTCTCAAAAACTCAACCTCCCAAACAAAGAACTTGTGGCCCCTGGGGCNCCGCACGGCAAACTTCCGGGGGAACCGGTAATTCCCGCGGCGCAAGTGGCCGGGAACCAAAACAACAACGGCCGAAGAAGCCCACCTTGGCGCGAACCGNGAACTTGGCCCTGGCCCAACCTGGCCCCAACAACCGGCACCCGGCCGGCTGGCCGCCAAAGANATACGGGCCAGGCCCCCGTNGCGAGCCAACAACGGGACGCNAACCCTTCCGGGAATGCACCCGAAGGAGGGAANCACAAAGCCACGTTACTCNACCAAACCATGCAACAAGGGAAACGCCCACCTGGAGCAACACCGNGCCGTGTGGANACCCCCCATTGGTGGACTATCCAACGTTGGNTTTCCCGGAACACCGCAAAACGNTGGCTGTGGACCGCCCCTCACAAGACAAGACCATTTTACCCAAAAACGCGCCCGGGGAACAGCCCCNATCGACGCTANNCCCGTTTTNCCGGGNCGAACNANTTGGTAGGGGCACCGCTANATGGCACCCAGGGNGGGGGAACCGCANCCCGGGGAATAATGGCCGCAACAAAAGTTGGCAGAAGCAACCGGGGTAAAGNCCAACAACCACGAAACGCANCCCGGGAGCCACCCCCNGGAAGCCTACNCCCCGGGCCAACCACAGCCACACAGGGGGGGGCAGGGTACCACCCCCTGGGGA] [+] EMBL AL692553 [ACTCNCCCCGCCGGTTTTAACGCAATCACTGGGNGCAAGAACGTTTATCATACAACGCATTTGGACGACGACTGCACCTGTTCATTTCTGTGTCGAAATCTGTCGAAGTACTGCAATGCCCTGCGTGGACGATTTGATGGACCGCATCAGCTTCCCTGCTACACTGAGCAAAGAATGCTTAAAAACATACCATCCTTGCCTGAATGCCCGTAGCAACTCACCTACCAACCTTGTAANACCAAACACTCTCAAAAACTCAACCTCCCAAACAAAGAACTTGTGGCCCCTGGGGCNCCGCACGGCAAACTTCCGGGGGAACCGGTAATTCCCGCGGCGCAAGTGGCCGGGAACCAAAACAACAACGGCCGAAGAAGCCCACCTTGGCGCGAACCGNGAACTTGGCCCTGGCCCAACCTGGCCCCAACAACCGGCACCCGGCCGGCTGGCCGCCAAAGANATACGGGCCAGGCCCCCGTNGCGAGCCAACAACGGGACGCNAACCCTTCCGGGAATGCACCCGAAGGAGGGAANCACAAAGCCACGTTACTCNACCAAACCATGCAACAAGGGAAACGCCCACCTGGAGCAACACCGNGCCGTGTGGANACCCCCCATTGGTGGACTATCCAACGTTGGNTTTCCCGGAACACCGCAAAACGNTGGCTGTGGACCGCCCCTCACAAGACAAGACCATTTTACCCAAAAACGCGCCCGGGGAACAGCCCCNATCGACGCTANNCCCGTTTTNCCGGGNCGAACNANTTGGTAGGGGCACCGCTANATGGCACCCAGGGNGGGGGAACCGCANCCCGGGGAATAATGGCCGCAACAAAAGTTGGCAGAAGCAACCGGGGTAAAGNCCAACAACCACGAAACGCANCCCGGGAGCCACCCCCNGGAAGCCTACNCCCCGGGCCAACCACAGCCACACAGGGGGGGGCAGGGTACCACCCCCTGGGGA] consensusID : consensus_9667#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 645 fasta sequence [CCGCAACAACGCCGTGCGAGCGGTTTGTTTACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGACGATTAGTTTATCGTGAAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAATCTACCATTCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTCAAACTCAACTACAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACGCTGACCTGGTCATGGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGACCGCACGAAA] [+] EMBL BM591442 [CCGCAACAACGCCGTGCGAGCGGTTTGTTTACATTGTCTGCGATGCAATAAATTGGTGAAATAACAATCTTTCGACGATTAGTTTATCGTGAAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATGAAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTTATCATACAAGATTTGGACGAGAAGCACCTGATTCATTTCGGTCGAAATCGTCGAAGTACTGCAAGCCCGCGTGGACGATTTGATGGACCGCATCAGCTTCCCGCTACACGAGAAAGAAGCTTAAATCTACCATTCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAACTCTCAAACTCAACTACAACAAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGGCGGACAAAAAGCGAACCCTGGACGATGCCGCACGCCAGCGACGCGCGCGAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACGCTGACCTGGTCATGGTCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCAAGAAGAAACACCGACCGCACGAAA] [+] EMBL CNS09BA8 [ GTGCGAGCGGTTTGTTTACATTGTCTGCAATGCAATAAATTGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCACACTACTCAGCAATGGTGAATGTAATGAAAGGAGTGCTCGTTGAATGTAATCCGGCTATGAAACAATTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAGAAGTTT ] consensusID : consensus_9667#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 438 fasta sequence [CAGGCAAGAATCGCGCACGAGGTGTCACTGTTCATTTCGGTCGAAATCGTTCGAAGATTAACTGGCAAGCCGCGTGGACGATTTGATTGGACCCGCATCAGCTTTCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCGAAGCCGTACACTCACTACCAACCTGTAAACAAACGTTCTCAAACTCAACTCCAACGAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGNGCGGACAAAAAGCGAACCCTGGACGATGCCGNACGCCAACGACAGCGGCGCGCAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACAGCGGACCTAGTCATGTACGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGCAGCGGACCGAGCACAGAAGAAACACCGCGCACGAAAGGGGCCG] [+] EMBL BX469761 [CAGGCAAGAATCGCGCACGAGGTGTCACTGTTCATTTCGGTCGAAATCGTTCGAAGATTAACTGGCAAGCCGCGTGGACGATTTGATTGGACCCGCATCAGCTTTCCGCTACACGAGAAAGAAGCTTAAAAACTACCATCCTGCGAAGCCGTACACTCACTACCAACCTGTAAACAAACGTTCTCAAACTCAACTCCAACGAAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGNGCGGACAAAAAGCGAACCCTGGACGATGCCGNACGCCAACGACAGCGGCGCGCAAAAGCGCTGGAAGCACTCGAGCAGGACAACTTCCACGAAGACCCGCACAGCGGACCTAGTCATGTACGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGCAGCGGACCGAGCACAGAAGAAACACCGCGCACGAAAGGGGCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9667#0 ---------AATTCCTCGAGAACTGTTGGCCTACTGGACATTGTCTGCGATGCAATAAAT 51 consensus_9667#2 --CCGCAACAACGCCGTGCGAGCGGTTTGTTTAC-----ATTGTCTGCGATGCAATAAAT 53 consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 ACTCNCCCCGCCGGTTTTAACGCAATCACTGGGNGCAAGAACGTTTATCATACAACGCAT 60 consensus_9667#0 TGGTGAAATAACAATCTTTCGGCGATTAGTTTATCGTGCAATCGTTGATAAAACAACCCA 111 consensus_9667#2 TGGTGAAATAACAATCTTTCGACGATTAGTTTATCGTGAAATCGTTGATAAAACAACCCA 113 consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 TTGGACGACGACTG-CACCTGTTCATTTCTGTGTCG-AAATCTGTCGAAGTACTGCAATG 118 consensus_9667#0 CACTACTCAGCAATGGTGAATGTTATGAAAGGCGTGCTCGTTGAATGTGATCCGGCTATG 171 consensus_9667#2 CACTACTCAGCAATGGTGAATGTTATGAAAGGCGTACTCGTTGAATGTGATCCGGCTATG 173 consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 CCCTGCGTGGACGATTTGATGGACCGCATCAGCTTCCCTGCTACAC-TGAGCAAAGAATG 177 consensus_9667#0 ---AAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAG-AAGTTTATCAT 227 consensus_9667#2 ---AAACAGTTCCTACTCCATCTGGACGAAACGCAATCACTGGGGAAG-AAGTTTATCAT 229 consensus_9667#3 ---------------------------------------------------------CAG 3 consensus_9667#1 CTTAAAAACATACCATCCTTGCCTGAATGCCCGTAGCAACTCACCTACCAACCTTGTAAN 237 * consensus_9667#0 ACAAGATTTGGACGAGAAGCACC-TG-TTCATTTCGGTCGAAATCGT-CGAAGT---ACT 281 consensus_9667#2 ACAAGATTTGGACGAGAAGCACC-TGATTCATTTCGGTCGAAATCGT-CGAAGT---ACT 284 consensus_9667#3 GCAAGAATCGCGCACGAGGTGTCACTGTTCATTTCGGTCGAAATCGTTCGAAGATTAACT 63 consensus_9667#1 ACCAAACACTCTCAAAAACTCAA------CCTCCCAAACAAAGAACT-TGTGGCC--CCT 288 * * * * * * * * * ** * * * ** consensus_9667#0 GCAAGCCCGCGTGGACGATTTGATGGA--CCGCATCAGCTTCCCGCTACACGAGAAAGAA 339 consensus_9667#2 GCAAGCCCGCGTGGACGATTTGATGGA--CCGCATCAGCTTCCCGCTACACGAGAAAGAA 342 consensus_9667#3 GGCAAGCCGCGTGGACGATTTGATTGGACCCGCATCAGCTTTCCGCTACACGAGAAAGAA 123 consensus_9667#1 GGGGCNCCGCACGGCAAACTTCCGGGGGAACCGGTAATTCCCGCGGCGCAAGTGGCCGGG 348 * **** ** * ** * * * * ** ** * * * consensus_9667#0 GCTTAAAAACTACCATCCTGCCGAAGCCGTAGCACTCACTACTAACCTGTAAACAAAC-- 397 consensus_9667#2 GCTTAAAT-CTACCATTCTGCCGAAGCCGTAGCACTCACTACCAACCTGTAAACAAAC-- 399 consensus_9667#3 GCTTAAAAACTACCATCCTGC-GAAGCCGTA-CACTCACTACCAACCTGTAAACAAACGT 181 consensus_9667#1 AACCAAAA-CAACAA--CGGCCGAAGAAG------------CCCACCTTGGCGCGAAC-- 391 *** * ** * * ** **** * * **** * *** consensus_9667#0 TCTCAAACTCAACTCCAAC--AAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGG-C 454 consensus_9667#2 TCTCAAACTCAACTACAAC--AAGATGGCGGGTCGCGAATCGGGACGTATCCGGGAGG-C 456 consensus_9667#3 TCTCAAACTCAACTCCAACG-AAGATGGCCGGTCGCGAATCGGGACGTATCCGGGAGNGC 240 consensus_9667#1 -CGNGAACTTGGCCCTGGCCCAACCTGGCC--CCAACAACCGGCACCCGGCCGGCTGGCC 448 * **** * * ** **** * ** *** ** **** * * consensus_9667#0 GGACAAAAAGCG-AACCCTGGACGATGCCGCACGCCAGCGACGC--GCGCGCAAA-GCGC 510 consensus_9667#2 GGACAAAAAGCG-AACCCTGGACGATGCCGCACGCCAGCGACGC--GCGCGAAAA-GCGC 512 consensus_9667#3 GGACAAAAAGCG-AACCCTGGACGATGCCGNACGCCAACGACAGCGGCGCGCAAAAGCGC 299 consensus_9667#1 GCCAAAGANATACGGGCCAGGCCCCCGTNGCGAGCCAACAACGG-GACGCNAACCCTTCC 507 * ** * ** ** * * * **** * ** *** * * consensus_9667#0 TGGAA-GCACTCGAGCAGGACAACTTCCACGAAGACCCGCAC-GCGGACCTGGTCATG-- 566 consensus_9667#2 TGGAA-GCACTCGAGCAGGACAACTTCCACGAAGACCCGCAC-GCTGACCTGGTCATGG- 569 consensus_9667#3 TGGAA-GCACTCGAGCAGGACAACTTCCACGAAGACCCGCACAGCGGACCTAGTCATGT- 357 consensus_9667#1 GGGAATGCACCCGAAGGAGGGAA---NCACAAAGCCACGTTA-CTCNACCAAACCATGCA 563 **** **** *** * ** *** *** * ** *** **** consensus_9667#0 TCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCA-AGAAGAA 625 consensus_9667#2 TCGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATGGCAGTGGACCGAGCA-AGAAGAA 628 consensus_9667#3 ACGAAGAAGGTGCCCAAATTCAGCGACAATCTCGATG-CAGCGGACCGAGCACAGAAGAA 416 consensus_9667#1 ACAAGGGAAACGCCCACCTGGAGCAACA-CCGNGCCGTGTGGANACCCCCCATTGGTGGA 622 * * * * ***** * *** *** * * * * *** ** * * * consensus_9667#0 ACACCG-CCGCACGAAAGGGGCCGAATACTATCGCGCAAAGTATCGTAAAACGTTTCCGC 684 consensus_9667#2 ACACCGACCGCACGAAA------------------------------------------- 645 consensus_9667#3 ACACCG--CGCACGAAAGGGGCCG------------------------------------ 438 consensus_9667#1 CTATCCAACGT-TGGNTTTCCCGGAACAC-----CGCAAAACGNTGGCTGTGGACCGCCC 676 * * ** * consensus_9667#0 AGCTGCTGGATGAGGAACGGCAGCAGCGACCGGATCCGCCGAACTATTTCAGT-GCCGCT 743 consensus_9667#2 ------------------------------------------------------------ consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 CTCACAAGACAAGACCATTTTACCCAAAAACGCGCCCGGGGAACAGCCCCNATCGACGCT 736 consensus_9667#0 GCACCCGCTTCCCGGCTGCCCGAGCGACACTTTTGTGCGGTGTGTGGATTTCCCTCCAGC 803 consensus_9667#2 ------------------------------------------------------------ consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 ANNCCCGTTTTNCCG--GGNCGAACNANTTGGTAGGGGCACCGCTANATGGCACCCAGGG 794 consensus_9667#0 TACACGTGCACGGCTTGCGGGACGCGATACTGCTGCGTACGGTGCTTGGGTACGCACCAG 863 consensus_9667#2 ------------------------------------------------------------ consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 NGGGGGAACCGCANCCCGGGGAATAATGGCCGCAACAAAAGTTG---------GCAGAAG 845 consensus_9667#0 GACACGCGGTGCTTGAAATGGACCGCTTAGAGGACTTAGAGTGAGTGGGTGAGTGAGTGT 923 consensus_9667#2 ------------------------------------------------------------ consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 CAACCGGGGTAAAGNCCAACAACCACGAAACGCANCCCGGGAGCCACCCCCNGGAAGCCT 905 consensus_9667#0 GCCGGAAAGGGAAGGTATATTATAATAAACTGAAATCAATTCTCATAACTTAAACGAAAA 983 consensus_9667#2 ------------------------------------------------------------ consensus_9667#3 ------------------------------------------------------------ consensus_9667#1 ACNCCCCGGGCCAACCACAGCCACACAGGGGGGGGCAGGGTACCACCCCCTGGGGA---- 961 consensus_9667#0 AAACAAACAAAAAAAAAAAAGGCCA 1008 consensus_9667#2 ------------------------- consensus_9667#3 ------------------------- consensus_9667#1 ------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||