These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9676#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1027 fasta sequence [CGCGGTTAAAAAGGTGAAACATGCCTGAAACTTGTGACCGGTATCTTTATATAACTGATTACGTACAAAGCATAANGATTCGCACGTGTGTGTAGAGGAACGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGTGCCGCTGCACCAGACGGCACACTCCGCAAGGTGGAAGATCTGCAAGGCAATGCTGGCTTCGACTGCCAGCAAAGACGANGGGCACGGTCGGCGAACGTTCCATACGACATTGATTCCATGATCGACAAGAACAACGAGACATATTATCCCGATGCCAACAGACCTGACCTCCCTGATCAACTGGGNGTACCGNTCACACGAGCATACCNGATCTTGCCACCATCCGCCGNTGTCACCGAACAAATACCATACATNNTTCGATCACCCGAGAATTTGCCCCCAAAGGGGGGATTGGTAGCCCCACGCACGGCATCTCTAAATACCCGGGCCTAACGGCTGGCAGGGGGCACTNACCGACACGGGCGNCNTNCTCCAACAGGAACACACCCACCGCACCGCACCACAANAGCGGACAACACGNACACCACATANCNGGCCGGCCCCGCCACANCGACGGAAAACCCGGCCAANAATCCAAGCAACTCCAAGCCAACCCAGNAAGGCNGACCACGAAAACCGACGACNACCGGACATCGAGGCCCANAAACAANAACAGAANCCAGGGGNACACCAGAGCCAGCANACACCGGCAACCCCGNGAAAGGGGAGCACCGCGNNGACCACCAGGNCNGACAGGAAACACGGTNCCCGCNCACCAACACGAAAGCGCGGGCAGCGACAGCAGCAAGCAACANGGGGCCTCGGNACAGCCCTGGCCAAACACAACATTCCGGGNAACGCACCCCACCACCCCCGCAACCCCACCACAAACCCACCCCGGAACGNAAAACCCCAGCGGCGAAACANACCCCCACCCCCCCGCGNNCTACCCCACGCACAACAC] [+] EMBL AL695460 [CGCGGTTAAAAAGGTGAAACATGCCTGAAACTTGTGACCGGTATCTTTATATAACTGATTACGTACAAAGCATAANGATTCGCACGTGTGTGTAGAGGAACGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGTGCCGCTGCACCAGACGGCACACTCCGCAAGGTGGAAGATCTGCAAGGCAATGCTGGCTTCGACTGCCAGCAAAGACGANGGGCACGGTCGGCGAACGTTCCATACGACATTGATTCCATGATCGACAAGAACAACGAGACATATTATCCCGATGCCAACAGACCTGACCTCCCTGATCAACTGGGNGTACCGNTCACACGAGCATACCNGATCTTGCCACCATCCGCCGNTGTCACCGAACAAATACCATACATNNTTCGATCACCCGAGAATTTGCCCCCAAAGGGGGGATTGGTAGCCCCACGCACGGCATCTCTAAATACCCGGGCCTAACGGCTGGCAGGGGGCACTNACCGACACGGGCGNCNTNCTCCAACAGGAACACACCCACCGCACCGCACCACAANAGCGGACAACACGNACACCACATANCNGGCCGGCCCCGCCACANCGACGGAAAACCCGGCCAANAATCCAAGCAACTCCAAGCCAACCCAGNAAGGCNGACCACGAAAACCGACGACNACCGGACATCGAGGCCCANAAACAANAACAGAANCCAGGGGNACACCAGAGCCAGCANACACCGGCAACCCCGNGAAAGGGGAGCACCGCGNNGACCACCAGGNCNGACAGGAAACACGGTNCCCGCNCACCAACACGAAAGCGCGGGCAGCGACAGCAGCAAGCAACANGGGGCCTCGGNACAGCCCTGGCCAAACACAACATTCCGGGNAACGCACCCCACCACCCCCGCAACCCCACCACAAACCCACCCCGGAACGNAAAACCCCAGCGGCGAAACANACCCCCACCCCCCCGCGNNCTACCCCACGCACAACAC] consensusID : consensus_9676#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 978 fasta sequence [GGCAGAATCCCCCCGACGTGTTTAAAACCGAAAAAGGTGAAACATGCCGAAATTGTGACCCTGGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGTGAACTGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGTTGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGTCACCAGACTGGGCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTTGCCAGCAAAGACGAGTGGCACGGTCGGCGAACTGTTCCATCTGACCATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACATTGCGGCCGCAGGCGACGCAATCAGATCAGACGAGGGCGATCGAACGTGGCTACAAAACGGTTCGCGTCACGGTCCGAGGGCTCGGCCTGGGACGAATGTCCGCTATAAACGGGGCTCGAGATGGCTGGGCTTGAACATTGTATCCATTACGNGACACGACCCGGTATCGTGGAATCCCCCCCGTCCAGAAAGCAAAGGAAGCTGTAACACATGTGGTGAAATTGTGGCCGTGCTGAGAGGTGGANTTACACTCTGTCATCATACCGTCATGCCATCGCAAATGACGCGCAATTGGAAAACNGCCGNCATNCACCTATCNNTACTTNCCCCAACGTTGGTTNGCCTTTCAAACCGTCGTCTACCAGTACGGACACGGAACGGGCCAATCTATCAACACAAACCTNAACGTCACTNCCAACACTTANANNAAATCACTAAANCAC] [+] EMBL AL930779 [GGCAGAATCCCCCCGACGTGTTTAAAACCGAAAAAGGTGAAACATGCCGAAATTGTGACCCTGGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGTGAACTGCAGTGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGTTGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGTCACCAGACTGGGCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTTGCCAGCAAAGACGAGTGGCACGGTCGGCGAACTGTTCCATCTGACCATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACATTGCGGCCGCAGGCGACGCAATCAGATCAGACGAGGGCGATCGAACGTGGCTACAAAACGGTTCGCGTCACGGTCCGAGGGCTCGGCCTGGGACGAATGTCCGCTATAAACGGGGCTCGAGATGGCTGGGCTTGAACATTGTATCCATTACGNGACACGACCCGGTATCGTGGAATCCCCCCCGTCCAGAAAGCAAAGGAAGCTGTAACACATGTGGTGAAATTGTGGCCGTGCTGAGAGGTGGANTTACACTCTGTCATCATACCGTCATGCCATCGCAAATGACGCGCAATTGGAAAACNGCCGNCATNCACCTATCNNTACTTNCCCCAACGTTGGTTNGCCTTTCAAACCGTCGTCTACCAGTACGGACACGGAACGGGCCAATCTATCAACACAAACCTNAACGTCACTNCCAACACTTANANNAAATCACTAAANCAC] consensusID : consensus_9676#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 935 fasta sequence [AGCAGATCGGCCGAACGGAAAAAGGTGAAACATGCCGAAATTGT-GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC---ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA-TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT-CGATCACGG-ATGCCAAGGGTGTGCCAC-AGTTTATCCG-CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA-TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC--AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG-CCCGGGACGAATGTCCGCTATAAA-GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAATGTGGCGAAATTGTGGCCCGTGCTGAGGAGGTGGAATTTAACACTCTGTCATCATACCGTCATGCCATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTCCTCTNCCACGTGTGCATCAACGTGTTACAGTTTTGTTTGATTGTTTATTTTAAAAAATAGTAATAAAATTAAAATTCTAGCACCAAAAAATNAACAAAANGACAGCATGTGCG] [+] EMBL AL696739 [AGCAGATCGGCCGA GGGATNAGGCGAAACATGCCGAAATTGTCGACCCGGTATCGCATGTAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGG CACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCACAAGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG ACC ] [+] EMBL BM615731 [ CCGAACAGAAAAAGGTGAAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGC ] [+] EMBL BM593668 [ cCGGAAAAAGGTGAAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCC ] [+] EMBL BX621991 [ gGGAAAAAGGTGAAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACNAACCAAATGTCCCTCCTGAAGCAGCTCA ] [+] EMBL BM618636 [ ccgAACATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCAC GTGTGTAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACATTTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGGCCCCAGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCC ] [+] EMBL BX626653 [ ATGCCGAAATTGT GACCCGGTATCGCATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACG ] [+] EMBL AL931555 [ CGAAATTGT GACCCGGTATCGCATGTAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCT ] [+] EMBL BX623913 [ TCGCATGTAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGTTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCC ] [+] EMBL BX623476 [ CATATAACGATTACGTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCTTGCTGAAGCAGCTCAATCTATTATCCTGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCT ] [+] EMBL BX613818 [ CGCACGTGTGTGTAGAGGAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTTCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTTCATTACGGACACGACCCCGGTATCGTGGAATCC ] [+] EMBL BX626462 [ aaAGAGGAACGCAGGAACAAACCAAATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTCCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCTATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAATGTGGCGAAATTGTGGCCCGTGCTGA GA GTGGAATTTAACGCTCTGTCATCATACCGTCATG CATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTCCTCTNCCACGTGTGCA ] [+] EMBL BX608906 [ GAACGCAGGAACAAAC ATGTCCCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAATGTGGCGAAATTGTGGCCCGTGCTGAGGAGGCGGAATTTAACACTCTGTCATCATACCGTCATGCCATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTCCT ] [+] EMBL BX609023 [ CCTCCTGAAGCAGCTCAATCTATTGTCCGGCCTAGTGCGCCGGACACTGGTAGGCGGTGTAAGACCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTTGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CGATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGA ] [+] EMBL BX628887 [ ATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGA TTTGCCACATCCGCGTGTCACCGAACAATACCATCATTT CNATCACGG ATGCCAAGGGTGTGCCAC AGTTTATCCG CTCGTGCGGTATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTAC AAAACGGTTCGCGTCACGGTCCGAGGCCTCGG CCCGGGACGAATGTCCGCTATAAANGGGGCTCGAGATGGCTGGGCTG ] [-] EMBL BX466803 [ TCATTTNCGATCACGGTATGCCAAGGGTGTGCCAC AGTTTATCCGTCTCGTGCGGCATCGAGGGCTTCAAGAACACGCGCAAAGGCACGAACA TTGCGGCGCAGGCGACCGCAATCAGCATCAGCACGAGGGCGATCGAACGTGGCTACTNAATACGGTTCGCGTCACGGTCCGAGGGCTCGG CCCGGGACGAATGTCCGCTATAAA GGGGCTCGAGATGGCTGGGCTGAACATTGTTTCCATTACGGACACGACCCCGGTATCGTGGAATCCCCCCCGTCCCAGAAAGCAAAGGAAGCTGTAAAATGTGGTGAAATTGTGGCCCGTGCTGAGGAGGTGGAATTTAACACTCTGTCATCATACCGTCATGCCATCGCAAAGACGCGCATGGAAAGCCGCCTTCCTTCTCTCCCACGTGTGCATCAACGTGTTACAGTTTTGTTTGATTGTTTATTTTAAAAAATAGTAATAAAATTAAAATTCTAGCACCAAAAAATNAACAAAANGACAGCATGTGCG] consensusID : consensus_9676#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence [CAAGAATTGCCTGAGGTTTGTATTGCATGTTACTGATTACGTACAAAGCATNACATTCGCACGTGTGTGTNGAGGAACGCAGTGAACAAACATGTTCCTCCTGTAAGCAGCTCAATCTATTGTCCGGCCTAAATGCTGCCGGACACTGTGTATGCTGTGTGTAAGACCGCTGCTACCAGACTGTGGCACACTCCGCAAGGTGTGAAGATCTGCAAGTGCTATTGCTTGGCTTCGCTTGCCCAGCAAAGACGAGTGTGCACGTGTCGGCGAAACTGTTTCATCTGACATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACTGAAACTCCCTGNATCAATGGGGTACCTGTTCAACGAGATTACCGATTTGGCACATTCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATTGCCAAGGGTGTTGCCACAGTATTATACCGNTCGTGCGGNATCNAAGNGGCTTCCAAGAACACGCGCAAAGGCACGAACATTGCGGCGCAGTGCGAACGAATCAGATCAGCACGCAGGTGCTGATCGAACGTGGCGTACAAAACNGGTTCTGCGTCACGGTCCCGAGGCCTCGGCGCCGGGGACGAATGTCCGCTATTAACATGGGGNTACGAGA] [+] EMBL AL930100 [CAAGAATTGCCTGAGGTTTGTATTGCATGTTACTGATTACGTACAAAGCATNACATTCGCACGTGTGTGTNGAGGAACGCAGTGAACAAACATGTTCCTCCTGTAAGCAGCTCAATCTATTGTCCGGCCTAAATGCTGCCGGACACTGTGTATGCTGTGTGTAAGACCGCTGCTACCAGACTGTGGCACACTCCGCAAGGTGTGAAGATCTGCAAGTGCTATTGCTTGGCTTCGCTTGCCCAGCAAAGACGAGTGTGCACGTGTCGGCGAAACTGTTTCATCTGACATTTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACTGAAACTCCCTGNATCAATGGGGTACCTGTTCAACGAGATTACCGATTTGGCACATTCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATTGCCAAGGGTGTTGCCACAGTATTATACCGNTCGTGCGGNATCNAAGNGGCTTCCAAGAACACGCGCAAAGGCACGAACATTGCGGCGCAGTGCGAACGAATCAGATCAGCACGCAGGTGCTGATCGAACGTGGCGTACAAAACNGGTTCTGCGTCACGGTCCCGAGGCCTCGGCGCCGGGGACGAATGTCCGCTATTAACATGGGGNTACGAGA] consensusID : consensus_9676#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 465 fasta sequence [CAGATCGCGCCNGAGGNNCAAAATGTGACCGGTATCGCATATAACGATTACGTTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGC] [+] EMBL AL697046 [CAGATCGCGCCNGAGGNNCAAAATGTGACCGGTATCGCATATAACGATTACGTTACAAAGCATAACATTCGCACGTGTGTGTAGAGGAACGCAGGAACAAACATGTCCTTGCTGAAGCAGCTCAATCTATTATCCGGCCTAGTGCGCCGGACACTGGTCGGCAGTGTAAGGCCGCTGCACCAGACGGCCACACTCCGCAAGGTGGAAGATCGCAAGGCAATGCTGGCTTCGCTGCCCAGCAAAGACGAGGGCACGGTCGGCGAACGTTCCATCGACATTGATTCCATGATCGACAAGAAAACGAGCATATTTCCCGATGCCAACACACCGACCTCCCTGATCAATGGGGTACCGTTCAACGAGATACCGATTTGCCACATCCGCGTGTCACCGAACAATACCATCATTTCGATCACGGATGCCAAGGGTGTGCCACAGTTTATCCGCTCGTGCGGCATCGAGGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9676#1 GGCAGAATCCCCCCGACGTGTTTAAAACCGAAAAAGGTGAAACATGCCGAAATTGTGACC 60 consensus_9676#2 ----------AGCAGATCGGCC--GAACGGAAAAAGGTGAAACATGCCGAAATTGTGACC 48 consensus_9676#3 -------------------------------------CAAGAATTGCCTGAGGTTTG--- 20 consensus_9676#4 ------------------------------CAGATCGCGCCNGAGGNNCAAAATGTGACC 30 consensus_9676#0 -----------------------CGCGGTTAAAAAGGTGAAACATGCCTGAAACTTGTGA 37 * * ** consensus_9676#1 CTGGGTATCGC-ATATAAC-GATTACGT-ACAAAGCATAAC-ATTCGCACGTGTGTGTAG 116 consensus_9676#2 C--GGTATCGC-ATATAAC-GATTACGT-ACAAAGCATAAC-ATTCGCACGTGTGTGTAG 102 consensus_9676#3 -----TATTGC-ATGTTACTGATTACGT-ACAAAGCATNAC-ATTCGCACGTGTGTGTNG 72 consensus_9676#4 ---GGTATCGC-ATATAAC-GATTACGTTACAAAGCATAAC-ATTCGCACGTGTGTGTAG 84 consensus_9676#0 CC-GGTATCTTTATATAACTGATTACGT-ACAAAGCATAANGATTCGCACGTGTGTGTAG 95 *** ** * ** ******** ********* * **************** * consensus_9676#1 AGTGAACTGCAGTGAACAAACATGTCCTTGCTG-AAGCAGCTCAATCTATTATCCGGCCT 175 consensus_9676#2 AG-GAAC-GCAG-GAACAAACATGTCCCTCCTG-AAGCAGCTCAATCTATTGTCCGGCCT 158 consensus_9676#3 AG-GAAC-GCAGTGAACAAACATGTTCCTCCTGTAAGCAGCTCAATCTATTGTCCGGCCT 130 consensus_9676#4 AG-GAAC-GCAG-GAACAAACATGTCCTTGCTG-AAGCAGCTCAATCTATTATCCGGCCT 140 consensus_9676#0 AG-GAAC-GCAGTGAACAAACATGTCCTTGCTG-AAGCAGCTCAATCTATTATCCGGCCT 152 ** **** **** ************ * * *** ***************** ******** consensus_9676#1 AG-TGTTGCCGGACACTG-GTCGGCAGTGT--AAGGCCGCTGTCACCAGACTG-GGCACA 230 consensus_9676#2 AG-TGC-GCCGGACACTG-GTCGGCAGTGT--AAGGCCGCTG-CACCAGAC-G-GCCACA 210 consensus_9676#3 AAATGCTGCCGGACACTGTGTATGCTGTGTGTAAGACCGCTGCTACCAGACTGTGGCACA 190 consensus_9676#4 AG-TGC-GCCGGACACTG-GTCGGCAGTGT--AAGGCCGCTG-CACCAGACGG--CCACA 192 consensus_9676#0 AG-TGC-GCCGGACACTG-GTCGGCAGTGTA-AGTGCCGCTG-CACCAGAC---GGCACA 204 * ** *********** ** ** **** * ****** ******* **** consensus_9676#1 CTCCGCAAGGTG-GAAGATC-GCAAGG--CAATGCT-GGCTTCGCTTGCC-AGCAAAGAC 284 consensus_9676#2 CTCCGCAAGGTG-GAAGATC-GCAAGG--CAATGCT-GGCTTCGCTGCCC-AGCAAAGAC 264 consensus_9676#3 CTCCGCAAGGTGTGAAGATCTGCAAGTGCTATTGCTTGGCTTCGCTTGCCCAGCAAAGAC 250 consensus_9676#4 CTCCGCAAGGTG-GAAGATC-GCAAGG--CAATGCT-GGCTTCGCTGCCC-AGCAAAGAC 246 consensus_9676#0 CTCCGCAAGGTG-GAAGATCTGCAAGG--CAATGCT-GGCTTCGACTGCC-AGCAAAGAC 259 ************ ******* ***** * **** ******* ** ********* consensus_9676#1 GAGTG-GCACG-GTCGGCGAA-CTGTTCCATCTGACCATTTGATTCCATGATCGACAAGA 341 consensus_9676#2 GAG-G-GCACG-GTCGGCGAA-C-GTTCCATC-GACA--TTGATTCCATGATCGACAAGA 316 consensus_9676#3 GAGTGTGCACGTGTCGGCGAAACTGTTTCATCTGACA-TTTGATTCCATGATCGACAAGA 309 consensus_9676#4 GAGGG--CACG-GTCGGCGAA--CGTTCCATC-GACA--TTGATTCCATGATCGACAAGA 298 consensus_9676#0 GANGG-GCACG-GTCGGCGAA--CGTTCCATACGACA--TTGATTCCATGATCGACAAGA 313 ** * **** ********* *** *** *** ********************* consensus_9676#1 A-AACGAG-CATATT-TCCCGATGCCAACACACCGA--C-TCCCTGATCAAT--GGGGTA 393 consensus_9676#2 A-AACGAG-CATATT-TCCCGATGCCAACACACCGA--CCTCCCTGATCAAT--GGGGTA 369 consensus_9676#3 A-AACGAG-CATATT-TCCCGATGCCAACACACTGAAACTCCCTGNATCAAT--GGGGTA 364 consensus_9676#4 A-AACGAG-CATATT-TCCCGATGCCAACACACCGA--CCTCCCTGATCAAT--GGGGTA 351 consensus_9676#0 ACAACGAGACATATTATCCCGATGCCAACAGACCTGA-CCTCCCTGATCAACTGGGNGTA 372 * ****** ****** ************** ** * ** ***** ** *** consensus_9676#1 CC-GTTCAACGAG-AT-ACCGAT-TTGCCACAT-CCGC--GTGTCACCGAACAA-TAC-A 444 consensus_9676#2 CC-GTTCAACGAG-AT-ACCGAT-TTGCCACAT-CCGC--GTGTCACCGAACAA-TACCA 421 consensus_9676#3 CCTGTTCAACGAG-ATTACCGAT-TTGGCACATTCCGC--GTGTCACCGAACAA-TACCA 419 consensus_9676#4 CC-GTTCAACGAG-AT-ACCGAT-TTGCCACAT-CCGC--GTGTCACCGAACAA-TACCA 403 consensus_9676#0 CCGNTCACACGAGCATACCNGATCTTGCCACCATCCGCCGNTGTCACCGAACAAATACCA 432 ** * ***** ** * *** *** *** **** ************* *** * consensus_9676#1 T---CATTTCGATCAC----GGAT--GCC----AAGGGTGT-GCCACAGT-TTAT---CC 486 consensus_9676#2 T---CATTTCGATCAC----GGAT--GCC----AAGGGTGT-GCCACAGT-TTAT---CC 463 consensus_9676#3 T---CATTTCGATCAC----GGATT-GCC----AAGGGTGTTGCCACAGTATTATA--CC 465 consensus_9676#4 T---CATTTCGATCAC----GGAT--GCC----AAGGGTGT-GCCACAGT-TTAT---CC 445 consensus_9676#0 TACATNNTTCGATCACCCGAGAATTTGCCCCCAAAGGGGGGATTGGTAGCCCCACGCACG 492 * ********* * ** *** ***** * ** * * consensus_9676#1 GC-TCGTGCGGCATCGAGGG-------CTTCAAGAACACGCGCAAAGGCACGAACATTGC 538 consensus_9676#2 GC-TCGTGCGGCATCGAGGG-------CTTCAAGAACACGCGCAAAGGCACGAACATTGC 515 consensus_9676#3 GN-TCGTGCGGNATCNAAGNG----GCTTCCAAGAACACGCGCAAAGGCACGAACATTGC 520 consensus_9676#4 GC-TCGTGCGGCATCGAGGGC--------------------------------------- 465 consensus_9676#0 GCATCTCTAAATACCCGGGCCTAACGGCTGGCAGGGGGCACTNACCGACACGGGCGNCNT 552 * ** * * * consensus_9676#1 GGCCGCAG-GCGAC-GCAATCAG-AT----CAG-ACGAGGGCG---ATC--GAACGTGGC 585 consensus_9676#2 GGC-GCAG-GCGACCGCAATCAGCAT----CAGCACGAGGGCG---ATC--GAACGTGGC 564 consensus_9676#3 GGC-GCAGTGCGAACG-AATCAG-AT----CAGCACGCAGGTGCTGATC--GAACGTGGC 571 consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 N-CTCCAACAGGAACACACCCACCGCACCGCACCACAANAGCGGACAACACGNACACCAC 611 consensus_9676#1 -TACAAAACGG--TTCGCGTCACGGTCC-GAGGGCTCGGC--CTGGGACGAATGTCCGCT 639 consensus_9676#2 -TACAAAACGG--TTCGCGTCACGGTCC-GAGGGCTCGGC--CCGGGACGAATGTCCGCT 618 consensus_9676#3 GTACAAAACNGGTTCTGCGTCACGGTCCCGAGGCCTCGGCGCCGGGGACGAATGTCCGCT 631 consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 ATANCNGGCCGGCCCCGCCACANCGACG-GAAAACCCGGC--CAANAATCCAAG-CAACT 667 consensus_9676#1 ATAAAC---GGGGCTCGAGATGGCTGGGCTTGAACATTG-TATCCATTACGNGACACGAC 695 consensus_9676#2 ATAAA----GGGGCTCGAGATGGCTGGGCT-GAACATTG-TTTCCATTACGG-ACACGAC 671 consensus_9676#3 ATTAACATGGGGNTACGAGA---------------------------------------- 651 consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 CCAAGC----CAACCCAGNAAGGCNGACCACGAAAACCGACGACNACCGGACATCGAGGC 723 consensus_9676#1 CC-GGTATCGTG---GAATCCCCCCCGTCC-AGAAAGCAAAGGAAGCTGTAACACATGTG 750 consensus_9676#2 CCCGGTATCGTG---GAATCCCCCCCGTCCCAGAAAGCAAAGAAAGCTGTAAAA--TGTG 726 consensus_9676#3 ------------------------------------------------------------ consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 CCANAAACAANAACAGAANCCAGGGGNACACCAGAGCCAGCANACACCGGCAACCCCGNG 783 consensus_9676#1 GTGAAATTGTGGC-C-GTGCTGAG-AGGTGGANTT--ACACTCTGTCATCATACCGTCAT 805 consensus_9676#2 GCGAAATTGTGGC-CCGTGCTGAGGAGGTGGAATTTAACACTCTGTCATCATACCGTCAT 785 consensus_9676#3 ------------------------------------------------------------ consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 AAAGGGGAGCACCGCGNNGACCACCAGGNCNGACAGGAAACACGGTNCCCGCNCACCAAC 843 consensus_9676#1 GCCATCGCAAATGACGCGCAATTGGAAAACNGCCGNCATNCACCTATCNNTACTTNCCCC 865 consensus_9676#2 GCCATCGCAAA-GACGCGCA--TGGAAAGCCGCCTTCCTCCTCT--NCCACGTGTGCATC 840 consensus_9676#3 ------------------------------------------------------------ consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 ACGAAAGCGCGGGCAGCGACAGCAGCAAGCAACANGGGGCCTCGGNACAGC-CCTGGCCA 902 consensus_9676#1 AACGTTGGTTNGCCTTTCAAACCGTCGTCTACCAGTACGGACACGGAACGGGCCAATCTA 925 consensus_9676#2 AACGT--GTTACAGTTTTGTTTGATTGTTTATTTTAAAAAATAGTAATAAAATTAAAATT 898 consensus_9676#3 ------------------------------------------------------------ consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 AACACAACATTCCGGGNAACGCACCCCACCACCCCCGCAACCCCACCACAAACCCACCCC 962 consensus_9676#1 TCAACAC--AAACCTNAACGTCACTNCCAACACTTANANNAAATCACTAAANCAC----- 978 consensus_9676#2 CTAGCACCAAAAAATNAACAAAANGAC-AGCATGTGCG---------------------- 935 consensus_9676#3 ------------------------------------------------------------ consensus_9676#4 ------------------------------------------------------------ consensus_9676#0 GGAACGN-AAAACCCCAGCGGCGAAACANACCCCCACCCCCCCGCGNNCTACCCCACGCA 1021 consensus_9676#1 ------ consensus_9676#2 ------ consensus_9676#3 ------ consensus_9676#4 ------ consensus_9676#0 CAACAC 1027 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||