These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9678#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1653 fasta sequence [CCGGAGCAGAATGTTACGTCGCCGTCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA-TCAAAGCTCGTCAGTGTCTTCCCTTTT-CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA-GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC-GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG-TGCG-GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG-GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG-ATCGTGGCCGGC-GGCA-TGG-AG-TCG-ATGTCGAACGTGCCGTACT-ACCTG-AAGCGGGGCAGCACACC-GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAAAACACGGCCAAGCAGATGGGCATCACG-CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTACCGGCGGGTCAACTTTGAC-AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGCACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATGACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAAGAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCTAGAAATT-AAGTGCATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCGCAGGCAATATATTTTTCTATGCTACAAGCTGGTTTTAAAATTCAATAAA] [+] EMBL BM609282 [CCGGAGCAGAATGTTACGTCGCCGTCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA TCAAACCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGCCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGCGCAATCGGTACTCGTGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGCCTGTCGTCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGT ] [+] EMBL BM624191 [ ccgCGTCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA TCAAAGCTCGGCAGTGTCTTCCCTTTT CCGATTTTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGCGGCAGGGCTGGGGCAG GCTCCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGACGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCC ] [+] EMBL BM652352 [ cCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA TCAAAGCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGA ] [+] EMBL BM602592 [ ccgCGACACGCGAATTAACCTAA TCAAAGCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTGCATCGTGGCCGGC GGCATTGG AG TCGAATGTCGAACGTGCCGTACTAACCTGAAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGACGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTG ] [+] EMBL AL932578 [ ttnGAATTA CTAACTCAAAGCTCGTCAGTGT TTCCCTTTTCCCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAACGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCCTGCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGGCTGCGNGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAGTGCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGCTGGCA TGGCAGCTCG ATGTCGAACGTGCCGTACT ACC ] [+] EMBL BX628141 [ AATTAACCTAA TCAAAGCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGACGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAAAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGC ] [+] EMBL BX607552 [ AGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGCCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGCGCAATCGGTACTCGTGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGCCTGTCGTCGCTTTCCGCCACCCAGCTCGG TTCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGTGGCAG GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAGAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGAGCGGCCAAAGCGTTCGAGGCGGAAATTACGCC ] [+] EMBL AL694314 [ cccgaggTTTT TCGATTCTTTCTGGAGT ATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGC ] [+] EMBL BX605360 [ AGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAGAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTACCGGCGGGTCAACTTTGAC AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGTACCGTCACGGCGGGCAAT ] [+] EMBL BX610902 [ TGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAAAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAGGAGTACCGGCGGGTCAACTTTGAC AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGCACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATGACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAAGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTG ] [+] EMBL BM610024 [ ccgACACGGCCAAGCAGATGGGCATCTCGTCGCTAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAACCGGACGTGGTCGTGAGCGAGGACGAGGAGTACCGGCGGGTCAACTTTGAC AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGCACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGC ] [+] EMBL BX603210 [ ACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTACCGGCGGGTCAACTTTGACAAAGTTCGGGCAG ] [+] EMBL BX614130 [ GCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATGACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTT ] [+] EMBL BX612891 [ GCGTCGGCGGTGGTGCTGATGACGGCGGAGTCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAAGAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCTAGAAATT AAGTGCATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCGC ] [+] EMBL BX617075 [ AAACCGCTCGCCTGGATCGTGGGCTTTGCTGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAATCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAAGAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCGAGAAATTAAAGTGCATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCGCAGGCAATATATTTTTCTATGCTACAAGCTGGTTTTAAAATTCAATAAA] consensusID : consensus_9678#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 684 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGCGCGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTG-GAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGCGGGCAGGGGCTGGGGGCAGGCTCCGGCCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTTTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGGAACGTGCATCGTGGCCGGCGGCATTGGAGTCGATGTCGAACGTGCCGTACTAACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGAACGGCATCGTGTTCGACGGGCTTGACGGACGTGTACAACAAGTTCCACATGGGCAACT] [+] EMBL BM608099 [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTG GAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGCGGGCAGGGGCTGGGGGCAGGCTCCGGCCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTTTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGGAACGTGCATCGTGGCCGGCGGCATTGGAGTCGATGTCGAACGTGCCGTACTAACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGAACGGCATCGTGTTCGACGGGCTTGACGGACGTGTACAACAAGTTCCACATGGGCAACT] [+] EMBL BM644720 [ cCGCG ACACGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTGAGAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGtg ] [+] EMBL BM581618 [ cCGCGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTG GAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGC GGCA GGGCT GGGGCAGGCTCCGG CCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGG TTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGG ACGTG ATCGTGGCCGGCGGCATTGGAGTCGATGTCGAACGTGCCGTACT ACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCG ACGGCATCGTGTTCGACGGGC TGACGGACGTGTACAACAAGTTCCACATGGGCA ] consensusID : consensus_9678#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence [AGATTGGCCGAGCAGTGTCTTCCTTTTCCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCGCACCGCACCCTATCGGAAGCTTCCAGAGCAGCTGTCATCGCTTTCCGGCACCAGTCGGTGCGGTCGCGGTCGAGTCGGGGTGAAGCAGGCGGGCATCGGCCAAGGAGGACGTGCAGGAGGTGTACATCGGGCAACGTGTGTGCGGCGGGGCTGGGCAGGCACCGGCCGTCAGGCCGTCATCTTTGCGGGCTGCCAAGTNCACCATCTGACCACAGGTCAACAAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCATCGGGCGCAAACGCTGATGCTCGGCCAGCAGGACAGTGATCGTGGGCCGGCGGATGGAGTCNATGTCGAACGTGCCGTAACTACCTTGA] [+] EMBL AL695995 [AGATTGGCCGAGCAGTGTCTTCCTTTTCCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCGCACCGCACCCTATCGGAAGCTTCCAGAGCAGCTGTCATCGCTTTCCGGCACCAGTCGGTGCGGTCGCGGTCGAGTCGGGGTGAAGCAGGCGGGCATCGGCCAAGGAGGACGTGCAGGAGGTGTACATCGGGCAACGTGTGTGCGGCGGGGCTGGGCAGGCACCGGCCGTCAGGCCGTCATCTTTGCGGGCTGCCAAGTNCACCATCTGACCACAGGTCAACAAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCATCGGGCGCAAACGCTGATGCTCGGCCAGCAGGACAGTGATCGTGGGCCGGCGGATGGAGTCNATGTCGAACGTGCCGTAACTACCTTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9678#0 CCGGAGCAGAATGTTACGTCGCCGTCGGCAGCCACCACACACTATCGGACGACACGCGAA 60 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ---------------------------CCGCGGACGCGTGGGCGGACGCGTGCGCGCGAA 33 consensus_9678#0 TTAACCTAATCAAAGCTCGTCAGTGTCTTCCCTTTTCCGATTCTTTCTGGAGTAATTGTA 120 consensus_9678#2 --------AGATTGGCCGAGCAGTGTCTTCC-TTTTCCGATTCTTTCTGGAGTAATTGTA 51 consensus_9678#1 TTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTA 93 * ** *********** ********** ***************** consensus_9678#0 CACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTG 180 consensus_9678#2 CACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTG 111 consensus_9678#1 CACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTG 153 ************************************************************ consensus_9678#0 CCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGG 240 consensus_9678#2 CCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGG 171 consensus_9678#1 CCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGG 213 ********************** ***************** ** **************** consensus_9678#0 TGATTGTGGCCGCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTT 300 consensus_9678#2 TGATTGTGGCG--CACC-GCACCC-TATCGGAAGCTTCCAGAGCAGC-TGTCATCGCTTT 226 consensus_9678#1 TGATTGTGGCCGCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGTCTGTCATCGCTTT 273 ********** **** **** * ** ***************** ************ consensus_9678#0 CCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGC- 359 consensus_9678#2 CCGGCACCAG--TCGGTGCGGTCGCGGTCGAGTCGG-GGTGAAGCAGGCGGGCATCGGCC 283 consensus_9678#1 CCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGC- 332 *** **** ************************ ********************** consensus_9678#0 AAGGAGGACGTGCAGGAGGTGTACATCGG-CAACGTGTGTGCGGC--GGGGCTGGGG-CA 415 consensus_9678#2 AAGGAGGACGTGCAGGAGGTGTACATCGGGCAACGTGTGTGCGGC--GGGGCTGGG--CA 339 consensus_9678#1 AAGGAGGACGTGCAGGAGGTGTACATCGG-CAACGTATGTGCGGGCAGGGGCTGGGGGCA 391 ***************************** ****** ******* ********* ** consensus_9678#0 GGCACCGGCCC-GCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCA 474 consensus_9678#2 GGCACCGGCC--GTCAGGCCGTCATCTTTGC-GGGCTGCC-AAGTNCACCATCTG-ACCA 394 consensus_9678#1 GGCTCCGGCCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCA 451 *** ****** * ***************** ******** **** ********* **** consensus_9678#0 C-GGTCAACAA-GGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCT 532 consensus_9678#2 CAGGTCAACAAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCATCGGGCGCAAACGCT 454 consensus_9678#1 CGGTTTAACAA-GGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCT 510 * * * ***** *************************** **** * ** ******** consensus_9678#0 GATGCTCGGCCAGCAGGAC-GTG-ATCGTGG-CCGGCGGCAT-GGAGTCGATGTCGAACG 588 consensus_9678#2 GATGCTCGGCCAGCAGGACAGTG-ATCGTGGGCCGGCGG-AT-GGAGTCNATGTCGAACG 511 consensus_9678#1 GATGCTCGGCCAGCAGGAACGTGCATCGTGG-CCGGCGGCATTGGAGTCGATGTCGAACG 569 ****************** *** ******* ******* ** ****** ********** consensus_9678#0 TGCCGTA-CTACCTGAAGCGGGGCAGCACACCG-TACGGTGGCGTGAGCCTGATCGA-TG 645 consensus_9678#2 TGCCGTAACTACCTTGA------------------------------------------- 528 consensus_9678#1 TGCCGTACTAACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGAACG 629 ******* **** * consensus_9678#0 GCATCGTGTTCGACGGGCT-GACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCG 704 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 GCATCGTGTTCGACGGGCTTGACGGACGTGTACAACAAGTTCCACATGGGCAACT----- 684 consensus_9678#0 GAAAACACGGCCAAGCAGATGGGCATCACGCGCAAGGACCAGGACGAGTTCGCCGTCCGC 764 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 AGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCC 824 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 GTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTAC 884 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 CGGCGGGTCAACTTTGACAAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGC 944 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 ACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATG 1004 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 ACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCC 1064 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 GATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTG 1124 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 CTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTC 1184 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 TCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTG 1244 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 CACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACC 1304 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 CATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGC 1364 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 GGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACC 1424 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 CACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAA 1484 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 GAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCTAGAAATTAAGTGC 1544 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 ATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCG 1604 consensus_9678#2 ------------------------------------------------------------ consensus_9678#1 ------------------------------------------------------------ consensus_9678#0 CAGGCAATATATTTTTCTATGCTACAAGCTGGTTTTAAAATTCAATAAA 1653 consensus_9678#2 ------------------------------------------------- consensus_9678#1 ------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||