These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9682#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1407 fasta sequence [GCAAGAATCGGCCCGAGGGGCTNNTTATTTGGATTTAATTGCGTAGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGGGATATTTTTGAGCTGTCAAAACCCATCAACAAAAAATAT-CCAAATAGCTCCAGCTCG-GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA-ATG-TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA-TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC-GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA-GTGCCGGAAGCTGA-TGC-TGTTC-TA-TA-TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG-AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT-CCCCAAACACC-AAATACCA-GAAATAGAGTTTAAGCACC-GGGTCTCGTGTAGTGCATTTTGT-CA-TTGAA-AGTTGTT-AGAAG-AAGCTCTGTG-AATAATACCCT-CGATAATAGTAAA-CCAATA-GCATTGAA-TTCGAAATGAAGGTGAAGAAA-AA-CATCCTCGT--CGGCTG-TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT-GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA-CCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA-CCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCG-GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTCTTTATTTTTCTGAAAAAAAAAAAA] [+] EMBL BX466370 [GCAAGAATCGGCCCGAGGGGCTNNTTATTTGGATTTAATTGCGTAGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGGGATATTTTTGAGCTGTCAAAACCCATCAACAAAAAATATCCCAAATAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATGCCCCAAACACCGAAATACCAGGAAATAGAGTTTAAGCACCGGGGTCTCGTGTAGTGCATTTTGTCCATTTGAACAGTTGTTNAGAAGCAAGCTCTGTGAAATAATACCCTCCGATTATAGTAAANCCAATANGCATTGAATTTCGAAATGAAGGTCAAGAAACAACCATCCTCCTTACGGCTGTTACCGGAAGTG ] [+] EMBL CNS08GN1 [ ggAAAAAATTT CCAAATAGC CCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCTGGGTGGAAAAACTGCTCCAGCTGGCCG ] [+] EMBL CNS08R32 [ ccATAT CCAAATAGCTCCAGCTCGTGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAGTACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGACTCTGCCGGCCGCGGTCACACTCCACACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTTCA CCACTAGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCG ] [+] EMBL CNS08O9N [ CCAAATAGCT CAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATTAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCag ] [+] EMBL BM591655 [ ccgCAAATAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG ] [+] EMBL CNS08DQJ [ aa atAAATAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATGCTTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACCCCAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA CCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACTTTTCGCGCCTGGGATCCGACGAAA ] [+] EMBL CNS096BB [ tATAGCTCTAGCTCGCGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAGCCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGG ] [+] EMBL CNS08IQW [ TAGCTCCAGCTCG GATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAAAAAACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTTCA CCACTAGACGCTAACAGCCTCGCCAAGATGGCC ] [+] EMBL BX608004 [ ATGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGA ATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGAC GTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTT ] [+] EMBL CNS09JJO [ CATAAATTATTGTGTGCGATATG TTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAA TAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAA AACGAGCTCCCTGCACCAGTACGATGACTGTCTATGACATTTGGCCAGAAAAAGTTTATCCCAACCGCACCGGAAAAGGGTAGCTTCCCGCTGGACCACGGCGGCCAGGTGCCGGAAGCTGAGTGCGTGTTCGTAGTAGTGCGCT ] [-] EMBL CNS08R33 [ CTTCCCGCTAGACCACGGCGGCCA GTGCCGGAAGCTGA TGC TGTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAGTACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTGCA CCACTAGACGCTTACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGTG GCGATACGGGGCTGGGTGCGATGGCCGAAGTGGATACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTt ] [-] EMBL CNS08IQX [ GTTC TA TA TGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCG AAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGTTGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGT TTTACAAACCGGAACAATCTTAACAT CCCCAAACACC AAATACCA GAAATAGAGTTTAAGCACC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA AGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCATTGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGACCGAGTTTGAGGTGGAAGTACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGTTCTGCCGGCCGCGGTCACACTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAGTGGGCCGACCTGCTCGTGATTGCA CCACTAGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGTG GCGATACGGGGCTGGGTGCGATGGCCGAAGTGGATACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTAT ] [-] EMBL CNS08GN2 [ CAAACCGGAACAATCTTAACGT CCCTAAACACC AAATACCA GAAATAGAGTTTAAGCCCC GGGTCTCGTGTAGTGCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA CCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTTCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTCTTTATTTTTCTGAAAAAAAAAAAA] [-] EMBL CNS09JJP [ GCATTTTGT CA TTGAA CGTTGTT AGAAG AAGCTCTGTG AATAATACCCT CGATAATAGTAAA CCAATA GCACCGAA TTCGAAATGAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCCGGTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCACCCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGAAAAGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATA ] [-] EMBL CNS096BC [ GAAGGTGAAGAAA AA CATCCTCGT CGGCTG TACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCT GGTGGAAAAACTGCTCCAGCTGGCCGAGTTCGAGGTGGAAGTACACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGTTCTGCCGGCCGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCC GTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCA CCGCTCGGCGCTTACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGAAACGCGCCTGGGATCCGACGAAACCGTTGCTCTTTTGTCCCGCGATGAAAACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTG GATTTAATGGAATAAAT GTTAT ] [-] EMBL CNS08DQK [ TTCTCGCCGCAGGGTCTGCCGGGGGCGGTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGA CCC TTCCTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCACCCGCTCGACGCTAACAGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCCTGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACATCCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGCATTTCGAAAACGCTCATGTGCG GCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGGGCAGAGTTGAGATTTAATGGAATAAATGGTTATGTTTCT ] [-] EMBL CNS08O9O [ CTGGGGCCACCGGGAGGTGCCGTGCATTGCGAAAACGCTCATGTGCGCGCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACGATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATA ] consensusID : consensus_9682#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 795 fasta sequence [GAATNGGCCGAGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGAAGCTGATGCTGTTCTATATGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAACACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAAAGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAATTCGAAATGAAGGTGAACGAAAAACATCCTCGTCGGCTGTACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCTGGTGGAAAAACTGCGTCCAGCTGACCGAGTTTGAGGTGGAATACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACANTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTCCTGCACATCGAGCTGGGCC] [+] EMBL AL934862 [GAATNGGCCGAGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCATCGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGCACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAAAAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGAAGCTGATGCTGTTCTATATGCGCTGCCTGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCCTACCTGCAGTGCCGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGGCTACAGCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAACACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAAAGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAATTCGAAATGAAGGTGAACGAAAAACATCCTCGTCGGCTGTACCGGAAGTGTGGCCACGATCAAGCTTCCCCTGCTGGTGGAAAAACTGCGTCCAGCTGACCGAGTTTGAGGTGGAATACACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCGGTCACANTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTCCTGCACATCGAGCTGGGCC] consensusID : consensus_9682#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence [CCGGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGCAAGGAACCACACGATATTTCCATTTTTTCTTAAATTTTGATTCTCTTTTTCCGTTATTTTGCTTCCTTTCAAATCATTCCGCCCAACGGACCAAAGGGGATATTTTTGAGCTGTCAAAACCTATCAACAAAAAATATCCCAAATAGCTCCAGCTCGGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCCTGCATAAATTATTGTGTGCGAATGTTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAACGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGGTGAGTTATCGTTTGTTGAAGCTGTCTAATTAGTTTGTTTGACCAATTTTGTGTTAAATTACATTAACTACTCTCGTTTCAAATGGTTTCATCATATAGCTTATGCCACACTTGCTTTTAACAGCGTAAGGAAGGCTCTTCCTCCTCCCAAAAATAACCCAAAACAAACCATGCACAGGGTGTCTCGGAACGCATCCCAAGAACCGTCCCATTTTGCTCTGTTTGCTGCAATGTGCATTAAAATTTCATTTCCATAAATTC] [+] EMBL BM633769 [CCGGTTTTCGCAGAAATTCTACTATCGTGCTCAGTGATGTTACAAAATGCAAGGAACCACACGATATTTCCATTTTTTCTTAAATTTTGATTCTCTTTTTCCGTTATTTTGCTTCCTTTCAAATCATTCCGCCCAACGGACCAAAGGGGATATTTTTGAGCTGTCAAAACCTATCAACAAAAAATATCCCAAATAGCTCCAGCTCGGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCCTGCATAAATTATTGTGTGCGAATGTTTTACATACTGGTGGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAACGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGGTGAGTTATCGTTTGTTGAAGCTGTCTAATTAGTTTGTTTGACCAATTTTGTGTTAAATTACATTAACTACTCTCGTTTCAAATGGTTTCATCATATAGCTTATGCCACACTTGCTTTTAACAGCGTAAGGAAGGCTCTTCCTCCTCCCAAAAATAACCCAAAACAAACCATGCACAGGGTGTCTCGGAACGCATCCCAAGAACCGTCCCATTTTGCTCTGTTTGCTGCAATGTGCATTAAAATTTCATTTCCATAAATTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9682#0 GCAAGAATCGGCCCGAGGGGCTNNTTATTTGGATTTAATTGCGTAGTTTTCGCAGAAATT 60 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 CTACTATCGTGCTCAGTGATGTTACAAAATGGGATATTTTTGAGCTGTCAAAACCCATCA 120 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 ACAAAAAATATCCAAATAGCTCCAGCTCGGATGGAGGTGCGGCGAAACACGCACGATTAA 180 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 TGGAAAAGTTTACGAGTTTTCGTGCATAAATTATTGTGTGCGAATGTTTTACATACTGGT 240 consensus_9682#1 ----------------------------------------------------GAATNGGC 8 consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 GGAAGTGTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAT 300 consensus_9682#1 CGA---GTGTGCATTGTAGTTCAAGCCCTATTTGCTGTAATAAATTCGATTGAACCTCAT 65 consensus_9682#2 ---------CCGGTTTTCGCAGAAATTCTACT-ATCGTGCTCAGTGATGTTACA---AAA 47 ** * * ** *** * ** * * * ** * * consensus_9682#0 CGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGC 360 consensus_9682#1 CGGAACAGAAGACATGAGGTTTATGTAACGTCGGTAGCGGCAAAACAACGAGCTCCCTGC 125 consensus_9682#2 TGCAAGGAACCACACGATATTTCCATTTTTTC--------TTAAATTTTGATTCTCTTTT 99 * ** * *** ** *** * ** *** ** * * consensus_9682#0 ACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAA 420 consensus_9682#1 ACCAGTACGATGACGTCTATGACATTTGGCCAGAAAAAGTTTATCCCGACCGCACCGGAA 185 consensus_9682#2 TCCGTTATTTTGCTTCCTTTCAAATC------------ATTCCGCCCAACGG-ACCA-AA 145 ** ** ** ** * * ** ** *** ** * *** ** consensus_9682#0 AAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGA-AGCTGATGCTGTTCTATAT 479 consensus_9682#1 AAGGGTAGCTTCCCGCTAGACCACGGCGGCCAGTGCCGGA-AGCTGATGCTGTTCTATAT 244 consensus_9682#2 GGGGATATTTTTGAGCT-GTCAAAACCTATCAACAAAAAATATCCCAAATAGCTCCAGCT 204 ** ** ** *** * * * * ** * * * * * ** * * consensus_9682#0 GCGCTGCC--TGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCC 537 consensus_9682#1 GCGCTGCC--TGCGAGAGAACGCCGACGATAATTCTGCCTGCCGGGAGGAATCGAAAGCC 302 consensus_9682#2 CGGATGGAGGTGCGGCGAAACACGCACGATTAATGGAAAAGTTTACGAGTTTTCCTGCAT 264 * ** **** *** * ***** * * * * * consensus_9682#0 TACCTGCAGTGC-CGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGG 596 consensus_9682#1 TACCTGCAGTGC-CGCATGGATCACGATCTGATGGCACGGGAAGACTTCTCCAAGCTAGG 361 consensus_9682#2 AAATTATTGTGTGCGAATGTTTTACATACTGGTGGAAGTGTGTGCATTGT--AGTTCAAG 322 * * *** ** *** * ** *** *** * * * ** * * * * consensus_9682#0 CTACA---GCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAAC 653 consensus_9682#1 CTACA---GCAGTGAGAAAAGCAGTGAAAACAAACCGGAACAATCTTAACATCCCCAAAC 418 consensus_9682#2 CCCTATTTGCTGTAATAAATTCGATTGAACCTCAACGGAACAGAA--GACAT----GAGG 376 * * ** ** * *** * * ** * * ******* **** * consensus_9682#0 ACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAA 713 consensus_9682#1 ACCAAATACCAGAAATAGAGTTTAAGCACCGGGTCTCGTGTAGTGCATTTTGTCATTGAA 478 consensus_9682#2 TTTATGTAACGTCGGTAGCGGCAAAACAACGAG----GTGAGTTATCGTTTGTTG----A 428 * ** * *** * ** ** ** * *** * ***** * consensus_9682#0 AGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAA 773 consensus_9682#1 AGTTGTTAGAAGAAGCTCTGTGAATAATACCCTCGATAATAGTAAACCAATAGCATTGAA 538 consensus_9682#2 AGCTGTCTAATTAGTTTGTTTGACCAATTTTGT--GTTAAATTACATTAACTACTCTCGT 486 ** *** * * * * *** *** * * * * ** * ** * * consensus_9682#0 TTCGAAATGAAGGTGAA-GAAAAACATCCTCGTCGGCTGTACCGGA-AGTGTGGCCACGA 831 consensus_9682#1 TTCGAAATGAAGGTGAACGAAAAACATCCTCGTCGGCTGTACCGGA-AGTGTGGCCACGA 597 consensus_9682#2 TTC-AAATGGTT-TCATCATATAGCTTATGCCACACTTGCTTTTAACAGCGTAAGGA--- 541 *** ***** * * * * * * * * ** * ** ** * consensus_9682#0 TCAAGCTTCCCCTGCTGGTGGAAAAACTGC-TCCAGCTGGCCGAGTTCGAGGTGGAAGTA 890 consensus_9682#1 TCAAGCTTCCCCTGCTGGTGGAAAAACTGCGTCCAGCTGACCGAGTTTGAGGTGGAA-TA 656 consensus_9682#2 --AGGCTCTTCCTCCT--CCCAAAAATAACCCAAAACAAACCATGCACAGGGTGTCTCGG 597 * *** *** ** ***** * * * ** * **** consensus_9682#0 CACGTGATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCG 950 consensus_9682#1 CACGTCATCGTAACCGAGCATGCCCGGCATTTCTTCTCGCCGCAGGATCTGCCGGCCGCG 716 consensus_9682#2 AACG-CATCCCAAG-AACCGTCCCATTTTGCTCTGTTTGCTGCA--ATGTGC--ATTAAA 651 *** *** ** * * * ** *** * ** *** ** *** consensus_9682#0 GTCACACTCCACACGGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTC 1010 consensus_9682#1 GTCACANTCCAAACAGACGCGGAAGAGTGGACGAGCTGGCAGAAGCGGGGCGACCCGGTC 776 consensus_9682#2 ATTTCATTTC-CATAAATTC---------------------------------------- 670 * ** * * * * * consensus_9682#0 CTGCACATCGAGCTGGGCAAATGGGCCGACCTGCTCGTGATTGCACCGCTCGACGCTAAC 1070 consensus_9682#1 CTGCACATCGAGCTGGGCC----------------------------------------- 795 consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 AGCCTCGCCAAGATGGCCAACGGGCTGTGCGATAATTTGCTGCTCTGTACGACACGCGCC 1130 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 TGGGATCCGACGAAACCGTTGCTCTTCTGTCCCGCGATGAACACGCGCATGTGGGAACAT 1190 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 CCGATTACGGCGGCACAGATCGGTACGCTCAAGTCCTGGGGCCACCGGGAGGTGCCGTGC 1250 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 ATTGCGAAAACGCTCATGTGCGGCGATACGGGGCTGGGTGCAATGGCCGAAGTGGACACG 1310 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 ATCGTCAGCACGATCAGGGACACGCTGTCGATGGAGCAGAGTTGAGATTTAATGGAATAA 1370 consensus_9682#1 ------------------------------------------------------------ consensus_9682#2 ------------------------------------------------------------ consensus_9682#0 ATGGTTATGTTTCTTTATTTTTCTGAAAAAAAAAAAA 1407 consensus_9682#1 ------------------------------------- consensus_9682#2 ------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||