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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9689#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1007 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGT---GCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT-GCAGAGATCGAATTGACACAGCTTTCCTCCCA--AC---ACACACACGCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT-CGGGGCCGAGATTGCCA-AAGATCTGGCCAAAGCCGGTATGATTACGATCG-GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG-C-AATGAAGTGTGACGTTTCGATCG-AAACC-GACATCGAGCGGACGTTCCAGCG-CATCGCGGACACGTACGGT-GGGGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT-GGACACGAACG-TGACG---GGGCTG-G-TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATG-GGCACATTGTGCACATCAGCAGCATTG-CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG-AAACGATGCGCCACGAGATGC-GGGACGCTGGTACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCT-CGAGGCGGAAGACATCTCGGCGGCCGTA-CTG-TACGCCATCG-GCACACCGCCCCACGTACAGGTGCACGAGCTCATCATCAAGCCGGTTGGGGAAGTCATGTAGACAGTTAAATCGTGTGTAAGATAGCGACAGGTGCGTGTGGCAAGAACAAAGCCTGCAGCGTACCAGGACAATTCCGAACGATGCATTGAATAAACTAGGCTAAAACAGTACAAAAAAAAAAAGGC]
[+] EMBL BM626522 [CCGCCCACGCGTCCGCCCACGCGT CCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCA AC ACACACACGCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C GATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGTGGGGGTAGACGTGCTGGTAAACAATGCCGGCAT ]
[+] EMBL BM621743 [ CCGCCCACGCGTCCGGCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCA AC ACACACACGCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C GATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTAGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT GGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGAAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGGAAAACGATGCGTCACGAGATGCGGGGACGCTGGGACGAAGATTAAGGTGAC ]
[+] EMBL CNS092HE [ ttcagtCGT GCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATTCGCAGAGATCGAATTGACACAGCTTTCCTCCCA ACACGACACACACACGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTGCCGGCATGCGGGGCCGAGATTGCCAGAAGATCTGGCCAAAGCCGGTATGATTACGATCGAGACTGGCCCGGCGTGTCGAGCGAGTAGAACAGCTGAAGCAGCAGCTGCCGAA GAAGCGGCCAACCGGCTTCACGACTAATGAAGTGTGACGTTTCGATCGTAAACCAGACATCGAGCGGACGTTCCAGCGTCATCGCGGACA ]
[+] EMBL BM629304 [ ccgGT GCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCA AC ACACACACGCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C GATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTAGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT GGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGAAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGCGTCACGAGATGC GGGACGCTGG ]
[+] EMBL CNS08RYU [ c GCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGC ACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCAACAC ACACACACACGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAA GAAGCGGCCAACCGGCTTCACG C AATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCTCGCACACGAACGCTGACGCGCGCGCTGCGCTGCTGTGC ]
[+] EMBL BM647823 [ ccg GCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCA AC ACACACACGCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C GATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTAGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT GGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGAAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGCGTCACGAGATGC GGGACGCTGG ]
[+] EMBL CNS09JDF [ TTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCAACAC ACACACACACGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAA GAAGCGGCCAACCGGCTTCACG C AATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT CGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGC ]
[+] EMBL CNS09EH2 [ TACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCAACAC ACACACACACGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAA GAAGCGGCCAACCGGCTTCACG C AATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT CGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGCGCCACGAGATGC GGGACG TGGTACGAAGATTAAGGTGACGAGCGTTA CCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCT CGAGGCGGAAGACATCTCGGCGGCCGTA CTG TACGCCATCG GCACACCGCCCCACGTACAGGTGCACGAGCTCATCATCAAGCCGGTTGGGGAAGTCATGTAGACAGTTAAATCGTGTGTAAGATAGCGACAGGTGCGTGTGGCAAGAACAA ]
[+] EMBL BM583418 [ ccgCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCA AC ACACACACGCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C GATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTAGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT GGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGAAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGCGTCACGAGATGC GGGACGCTGGGACGAAGAT ]
[+] EMBL BM597514 [ TTACTGCGTGGCTTTATT GCAGAGATCGAATTGACACAGCTTTCCTCCCA AC ACACACACGCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCAT CGGGGCCGAGATTGCCA AAGATCTGGCCAAAGCCGGTATGATTACGATCG GACTGGCCCGGCGTGTCTAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C GATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTAGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT GGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGT ]
[-] EMBL CNS091LN [ aGATCG GACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C AATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTGGACGTGCCGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT CGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGCGCCACGAGATGC GGGACGCTGGTACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCT CGAGGCGGAAGACATCTCGGCGGCCGTA CTG TACGCCATCG GCACACCGCCCCACGTACAGGTGCACGAGCTCATCATCAAGCCGGTTGGGGAAGTCATGTAGACAGTTAAATCGTGTGTAAGATAGCGACAGGTGCGTGTGGCAAGAACAAAGCCTGCAGCGTACCAGGACAATTCCGAACGATGCATTGAATAAACTAGGCTAAAACAGTACAAAAAAAAAAAGGC]
[-] EMBL CNS09EH3 [ GTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACG C AATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGAAACGTACGGT GGGGTGGACGTGCTGGTAAACAATGCCGGCTTCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT CGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGCGCCACGAGATGC GGGACGCTGGTACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCT CGAGGCGGAAGACATCTCGGCGGCCGTA CTG TACGCCATCG GCACACCGCCCCACGTACAGGTGCACGAGCTCATCATCAAGCCGGTTGGGGAAGTCATGTAGACAGTTAAATCGTGTGTAAGATAGCGACAGGTGCGTGTGGCAAGAACAAAGCCTGCAGCGCACCAGGACAATTCCGAACGATGCATTGAATA ]
[-] EMBL CNS092HF [ GCTGAAGCAGCCGCTGCCGAAGGAAGCGGCCAACCGGCTTTACG C AATGAATTGTGACGTTTCGATCG AAACC GACCTCGTGCGGACGTTCCAGCG CATCGGGGAAACGTACGGT GGGGTGGACGTGCTGGTAAAAAATGCCGGCTTCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT CGAAACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGCGGCACATTGTGGACCTCAGCAGGATTGTCCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATGACGG AAACGATGCGCCACGAGATGC GGGACGTTGGTACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCTCCGAGGCGGAAGACATCTCGGCGGCCGTATCTGCTACGCCATCGCGCACACC ]
[+] EMBL BX618039 [ GCTTCACG C AATGAAGTGTGACGTTTCGATCG AAACC GACATCGAGCGGACGTTCCAGCG CATCGCGGACACGTACGGT GGGGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCT GGACACGAACG TGACG GGGCTG G TGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATG GGCACATTGTGCACATCAGCAGCATTG CCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGG AAACGATGCGCCACGAGATGC GGGACGCTGGCACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCT CGAGGCGGAAGACATCTCGGCGGCCGTA CTG TACGCCATCG GC ]
consensusID : consensus_9689#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 768 fasta sequence
[GAAACATCGGCCGTTATACTGCGTGGCCTTATTGCAGAGATCGAATTGACAGAGCTTTCCTCCCAACACACACACACACACACGCTAAAGATGGATCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCTGGCCAAAGCCGGCATGATTACGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGACATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGTGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCTGGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCTAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGGAAACGATGCGCCACGAGATGCGGGACGCTGGCACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCTCGAGGCGGAAGACATCTCGGCGGCCGTACTGTACGCCATCGGCACACCGCCCCACGT]
[+] EMBL BX615860 [GAAACATCGGCCGTTATACTGCGTGGCCTTATTGCAGAGATCGAATTGACAGAGCTTTCCTCCCAACACACACACACACACACGCTAAAGATGGATCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCTGGCCAAAGCCGGCATGATTACGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGACATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGTGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCTGGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCTAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGGAAACGATGCGCCACGAGATGCGGGACGCTGGCACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCTCGAGGCGGAAGACATCTCGGCGGCCGTACTGTACGCCATCGGCACACCGCCCCACGT]
consensusID : consensus_9689#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 698 fasta sequence
[CCTTTTGGATTCAGTCGTGCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTCACTGCGTGGCTTTATTGCAGAGATCGAATTGACACAGCTTTCCTCCCAACACACACACACACGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGACATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGGGTGGACGTGCCGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCTCGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGGAAACGATGCGCCACGAGATGCGGGACGCTGGTACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGT]
[+] EMBL CNS091LM [CCTTTTGGATTCAGTCGTGCGATTACCATCCATCATCGGAGGTGTGAAAACAGTGCAACATCAGCCGTGTCACTGCGTGGCTTTATTGCAGAGATCGAATTGACACAGCTTTCCTCCCAACACACACACACACGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGACATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGGGTGGACGTGCCGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGCGCCGTGCTCGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGGAAACGATGCGCCACGAGATGCGGGACGCTGGTACGAAGATTAAGGTGACGAGCGTTAGCCCTGGTGCAGT]
consensusID : consensus_9689#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 633 fasta sequence
[CCGCGGACGCGTGGGGGAGGTGTGAAATCAGTGAAACATCGGCCGTTATACTGCGTGGCCTTATTGCAGAGATCGAATTGACAGAGCTTTCCTCCCAACACACACACACACACACGCTAAAGATGGATCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCTGGCCAAAGCCGGCATGATTACGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGACATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGGGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCTGGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCA]
[+] EMBL BM653693 [CCGCGGACGCGTGGGGGAGGTGTGAAATCAGTGAAACATCGGCCGTTATACTGCGTGGCCTTATTGCAGAGATCGAATTGACAGAGCTTTCCTCCCAACACACACACACACACACGCTAAAGATGGATCGTTGGAACGGTAAGGTAGCGGTAGTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCTGGCCAAAGCCGGCATGATTACGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTGCCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGACATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGGGTGGACGTGCTGGTAAACAATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGCGCCGTGCTGGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCA]
consensusID : consensus_9689#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 270 fasta sequence
[TTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCTCGAGGCCGATCTGCGCGCCG-TGCTCAAAACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGGAAACGATGCGCCACGAGATGCGGGACGCTG]
[-] EMBL CNS09P3A [TTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCATTGCTCGAGGCCGATCTGCGCGCCG TGCTCAAAACGAACGTGACGGGGCTGG ]
[+] EMBL CNS09P39 [ TGTTCCTATTCCGGAAGAAATGCCATTGCTCGAGGCCGATCTGCGCGCCGCTGCTCGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCGATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGTGTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATCACGGAAACGATGCGCCACGAGATGCGGGACGCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9689#1 ------------------------------------------------------------
consensus_9689#3 ----------------------------CCGCGGACGCGTGGGGGAGGTGTGAAATCAGT 32
consensus_9689#0 CCGCCCACGCGTCCGCCCACGCGTGCGATTACCATCCATCATCGGAGGTGTGAAAACAGT 60
consensus_9689#2 ------CCTTTTGGATTCAGTCGTGCGATTACCATCCATCATCGGAGGTGTGAAAACAGT 54
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 GAAACATCGGCCGTTATACTGCGTGGCCTTATTGCAGAGATCGAATTGACAGAGCTTTCC 60
consensus_9689#3 GAAACATCGGCCGTTATACTGCGTGGCCTTATTGCAGAGATCGAATTGACAGAGCTTTCC 92
consensus_9689#0 GCAACATCAGCCGTGTTACTGCGTGGCTTTATTGCAGAGATCGAATTGACACAGCTTTCC 120
consensus_9689#2 GCAACATCAGCCGTGTCACTGCGTGGCTTTATTGCAGAGATCGAATTGACACAGCTTTCC 114
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 TCCCAACACACACACACACACACGCTAAAGATGGATCGTTGGAACGGTAAGGTAGCGGTA 120
consensus_9689#3 TCCCAACACACACACACACACACGCTAAAGATGGATCGTTGGAACGGTAAGGTAGCGGTA 152
consensus_9689#0 TCCCAACACACACAC------GCGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTA 174
consensus_9689#2 TCCCAACACACACACAC----ACGCTAAAGATGGACCGTTGGAACGGTAAGGTAGCGGTA 170
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 GTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCTGGCCAAAGCCGGC 180
consensus_9689#3 GTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCTGGCCAAAGCCGGC 212
consensus_9689#0 GTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATCTGGCCAAAGCCGGT 234
consensus_9689#2 GTGACGGGCGCCAGTTCCGGCATCGGGGCCGAGATTGCCAAAGATC-------------- 216
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 ATGATTACGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTG 240
consensus_9689#3 ATGATTACGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTG 272
consensus_9689#0 ATGATTACGATCGGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTG 294
consensus_9689#2 ------------GGACTGGCCCGGCGTGTCGAGCGAGTCGAACAGCTGAAGCAGCAGCTG 264
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 CCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGAC 300
consensus_9689#3 CCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGAC 332
consensus_9689#0 CCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGAC 354
consensus_9689#2 CCGAAGGAAGCGGCCAACCGGCTTCACGCAATGAAGTGTGACGTTTCGATCGAAACCGAC 324
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 ATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGTGTGGACGTGCTGGTAAAC 360
consensus_9689#3 ATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGGGTGGACGTGCTGGTAAAC 392
consensus_9689#0 ATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGGGTGGACGTGCTGGTAAAC 414
consensus_9689#2 ATCGAGCGGACGTTCCAGCGCATCGCGGACACGTACGGTGGGGTGGACGTGCCGGTAAAC 384
consensus_9689#4 ----------------------------------------------------TTCTGGAC 8
* **
consensus_9689#1 AATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGC 420
consensus_9689#3 AATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGC 452
consensus_9689#0 AATGCCGGCATCGTGCGCCAGAACAATCTGCTCGACCTCGGTACGGCGGCCGATCTGCGC 474
consensus_9689#2 AATGCCGGCATCGTGCGCCAGAACAATCTGCTCGATCTCGGTACGGCGGCCGATCTGCGC 444
consensus_9689#4 GGTGT-----TCCTATTCCGGAAGAAA-TGCCATTGCTCGA------GGCCGATCTGCGC 56
** ** * ** *** ** *** **** *************
consensus_9689#1 GCCGTGCTGGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCG 480
consensus_9689#3 GCCGTGCTGGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCG 512
consensus_9689#0 GCCGTGCTGGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCG 534
consensus_9689#2 GCCGTGCTCGACACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCG 504
consensus_9689#4 GCCGTGCTCAAAACGAACGTGACGGGGCTGGTGCTGTGCAGCCAGTGGGCCTACAAGTCG 116
******** * ************************************************
consensus_9689#1 ATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCAT------------- 527
consensus_9689#3 ATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGT 572
consensus_9689#0 ATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGT 594
consensus_9689#2 ATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGT 564
consensus_9689#4 ATGGTGGACCGGAAGGTGGATGGGCACATTGTGCACATCAGCAGCATTGCCGGCCACAGT 176
***********************************************
consensus_9689#1 -TGCCTAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATC 586
consensus_9689#3 GTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATC 632
consensus_9689#0 GTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATC 654
consensus_9689#2 GTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATC 624
consensus_9689#4 GTGCCGAACTTCCCGAAGCTTAACATCTACCCCGGTACGAAGCATGCGGTGCGCGCGATC 236
**** ******************************************************
consensus_9689#1 ACGGAAACGATGCGCCACGAGATGCGGGACGCTGGCACGAAGATTAAGGTGACGAGCGTT 646
consensus_9689#3 A----------------------------------------------------------- 633
consensus_9689#0 ACGGAAACGATGCGCCACGAGATGCGGGACGCTGGTACGAAGATTAAGGTGACGAGCGTT 714
consensus_9689#2 ACGGAAACGATGCGCCACGAGATGCGGGACGCTGGTACGAAGATTAAGGTGACGAGCGTT 684
consensus_9689#4 ACGGAAACGATGCGCCACGAGATGCGGGACGCTG-------------------------- 270
*
consensus_9689#1 AGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCA 706
consensus_9689#3 ------------------------------------------------------------
consensus_9689#0 AGCCCTGGTGCAGTGAAGACGGAAATTCTGGACGGTGTTCCTATTCCGGAAGAAATGCCA 774
consensus_9689#2 AGCCCTGGTGCAGT---------------------------------------------- 698
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 TTGCTCGAGGCGGAAGACATCTCGGCGGCCGTACTGTACGCCATCGGCACACCGCCCCAC 766
consensus_9689#3 ------------------------------------------------------------
consensus_9689#0 TTGCTCGAGGCGGAAGACATCTCGGCGGCCGTACTGTACGCCATCGGCACACCGCCCCAC 834
consensus_9689#2 ------------------------------------------------------------
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 GT---------------------------------------------------------- 768
consensus_9689#3 ------------------------------------------------------------
consensus_9689#0 GTACAGGTGCACGAGCTCATCATCAAGCCGGTTGGGGAAGTCATGTAGACAGTTAAATCG 894
consensus_9689#2 ------------------------------------------------------------
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 ------------------------------------------------------------
consensus_9689#3 ------------------------------------------------------------
consensus_9689#0 TGTGTAAGATAGCGACAGGTGCGTGTGGCAAGAACAAAGCCTGCAGCGTACCAGGACAAT 954
consensus_9689#2 ------------------------------------------------------------
consensus_9689#4 ------------------------------------------------------------
consensus_9689#1 -----------------------------------------------------
consensus_9689#3 -----------------------------------------------------
consensus_9689#0 TCCGAACGATGCATTGAATAAACTAGGCTAAAACAGTACAAAAAAAAAAAGGC 1007
consensus_9689#2 -----------------------------------------------------
consensus_9689#4 -----------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||