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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9695#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1246 fasta sequence
[GAATCGGCACGAGGTGCGCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGAC--GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT-AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA-CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG--CGATTTCGGAACGGTTTAACG-CAGAAGTT-GGTGCACT-A--A--TTATTGCAACAAAATGGAC-TTTGTGA-AAGACTTT-TGTTACTACTTC-GGCG-TCATA-GCA-TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGG-TGCCCTACGTGACGCGAGACTTTTGGA-GTGCTCTG--CCACCGAAA-CGGATCGAAC-ACTTCGCCGGTCCCATCCCGTACGTC-A-TCA-TACATCATTCGTA-CCGGCCGG-CGGC--ATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCA-GAAGATGCACCAGGACGAGCGCCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCACGTGTACCA-GGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTT-GGGATCTGTCTGATCGGTGATTGGGTTGCGGA-TTTGCCACCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTACACCTTGCTGGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGCTGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTCGATCAGAAAAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACTCTTAAATAGCTTATTAACGTGCGCTACCTCTCCTTTGCATACGGTAACCATCATGTTCCTAAAGTGTGTGTTTTTTGTAATAAAACCATTCAANACCTTAAAAAAAA]
[+] EMBL BX468708 [GAATCGGCACGAGGTGCGCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAAGCAAATTCCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTCGGAACGGTTTAACG CAGAAGTTAGGTGCACT ANNACTTTATTGCAACAAAATGGACTTTTGTGANAAGACTTTCTGTTACTACTTCGGGCGNTCATAGGCAGTTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTTGCCCTACGTGACGCGAGACTTTTGGAGGTGCTCTGANCCACCGAAACCGGATCGAACGACTTCGCCGGTCCCATCCCGTACGTCGAGTCAGTACATCATTCGNACCCGGACGGACGGCAGATGCTACA ]
[+] EMBL BX624175 [ CGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGAC GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGANGAGAAAGATTGTC ]
[+] EMBL BX604660 [ ATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGAC GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTAAGAACGGTTTAACG CAGAAGTT GGTGCACT A A TTGTTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTT ]
[+] EMBL CNS09OVM [ CGCCAT CCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATTCCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTCGGAACGGTTTAACG CAGAAGTT AGTGCACTAA A TTATTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGG TGCCCTACGTGACGCGAGACTTTTGGA GTGCTCTG CCACCGAAA CGGATCGAAC ACTTCGCCGGTCCCATCCCGTACGTC A TCA TACATCATTCGTA CCGGCCGG CGGC ATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCA GAAGATGCACCAGGACGAGCGCCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCACGTGTACCA GGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTTGGGGATCTGTCTGATCGGTGATTGGGTTGCGGA TTTGCCACCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAAC ]
[+] EMBL AGA282423 [ ACGCTATCAACAATCGCGAC GACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGT AACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAA CAAATACCTCACGAAAATACTGCTTATAAAAAAACTCCAGTGGCGGTGAGGAGAAAGATTGTCCAAGAAG CGATTTAAGAACGGTTTAACG CAGAAGTT GGTGCACT A A TTGTTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGC ]
[+] EMBL BX615009 [ TGAGGAGAAAGATTGTCCAAGAAG CGATTTAAGAACGGTTTAACG CAGAAGTG GGTGCACT A A TTGTTGCAACAAAATGGAC TTTGTGA AAGACTTG GGTTACTACTTC GGCG TCATA GCA TTTACCCTATCATACGTTGCGGTTGATAGTAAAGCAGGTGACCCGG TGCCCTACGTGACGCGAGACTCCTGGA GTGCTCTG CCACCGAAA CAGATCG ]
[+] EMBL AL697052 [ agcAGATCG CCACGAGGTNCAATTTCGGAACGGTTTAACGCCAGAAGTT AGTGCACTAA A TTATTGCAACAAAATGGAC TTTGTGA AAGACTTT TGTTACTACTTC GGCG TCATA GCA TTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGG TGCCCTACGTGACGCGAGACTTTTGGA GTGCTCTG CACCGAAA CGGATCGAAC ACTTCGCCGGTCCCATCCCGTACGTC A TCA TACATCATTCGTA CCGGCCGG CGGC ATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCACGAAGATGCACCAGGACGAGCGCCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCACGTGTACCAGGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTT GGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTTGCCACCGAAGAA ]
[-] EMBL CNS09OVN [ CTTTGCGGTCGGTGGCGACGGGCACGTGTACCA GGGCCGGGGATTCAATGTGATTGG GCTCATGCGCCCCGATACAACAACCGCAGCGTT GGGATCTGTCTGATCGGTGATTGGGTTGCGGA TTTGCCACCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTACACCTTGCTGGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGCTGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTCGATCAGAAAAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACTCTTAAATAGCTTATTAACGTGCGCTACC ]
[-] EMBL AGA280799 [ ATGGTGTCCGGAATGGGCTGATTGCACAGAACTACACCTTGCTCGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGCTGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTTGATCAGAACAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACTCTT AATAGCTTATTAACGTGCGCTACCTCTCCTTTGCATACGGTAACCATCATGTTCCTAAAGTGTGTGTTTTTTGTAATAAAACCATTCAANACCTTAAAAAAAA]
consensusID : consensus_9695#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 833 fasta sequence
[TTGCCCCAGGTTTACTGCG-CGGAG-CATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGAC-TTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGA-CCCGGTGCCCTACGTGACGCGAGAC-TTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCAT-CCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGGAAGATGCACCCAGGGANCGTGCGTCAGTGGAACGACAATCGGGTACAGCTTTGCGGTCGGTGGCAGACGGGCCGCGTTGTACCAGGGGCCGGGGGATTCAACT]
[+] EMBL AL693600 [TTGCCCCAGGTTTACTGCG CGGAG CATCCGCGAT ATAAGTGCGCGTACTTGAGTGCGTA CACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAA ACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAATANAGATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCCGGTGCCCTACGTGACGCGAGACTTTTTGGAGTGCTCTGGCACCGAAACAGATCGAACACTTCGCCGGTCCCAT CCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGGAAGATGCACCCAGGGANCGTGCGTCAGTGGAACGACAATCGGGTACAGCTTTGCGGTCGGTGGCAGACGGGCCGCGTTGTACCAGGGGCCGGGGGATTCAACT]
[+] EMBL BM588668 [ ccgGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAAGAAATATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGAC TTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGA CCCGGTGCCCTACGTGACGCGAGAC TTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCAT CCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCAT ]
[+] EMBL BM584769 [ ccgCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCTCTGTACGCAAATAATTCGATCGAGTGGGTTCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACTGTACAACAAATAGCTCACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGTCCAAAAAGCGATTTAAGAACGGTTTAACGCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAAGAC TTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGA CCCGGTGCCCTACGTGACGCGAGAC TTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCCGTACGTCATCATACATCATTCGTACCGGCCGGCGGCA ]
consensusID : consensus_9695#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 771 fasta sequence
[GCCCCGAGGTTANAGTGCGTACACCGACCAGTTGTGCGCCATCCCGTNCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGACGACCACGCGCGACACTGCTCTACTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACNGCACCAACGCACACAACACCGTACAACAAATACCTCGACGAAAATACTGCTTATACAAAAGAACTCCAGTGGCGGTGCAGGAGANAAGATTGTCCAAGAAGCGATTTAAGCAACGGTTTAACGCAGNAGTNGGTGCACTAATTGTTGCAACAAAATGGACTTTGTGAAACGACTTTNGTTACTACTTCGGCGTCATAGCTTTTACCCTATTTTACGTTGCGGTTGATACGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGGACTTATNGGCACGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGGCGGCGGTCATGCTACAACGGGTCTGNCGTGCNATCTGTCGGCAAATGCAATCGAATGCAGAAAGATTGCACCACGACGGTGCGTCAAGTGGAANCGACATCGGGTAACAGATATTGACNGNNCGGTAGGACGA]
[+] EMBL AL692489 [GCCCCGAGGTTANAGTGCGTACACCGACCAGTTGTGCGCCATCCCGTNCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGACGACCACGCGCGACACTGCTCTACTGTACGCAAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACNGCACCAACGCACACAACACCGTACAACAAATACCTCGACGAAAATACTGCTTATACAAAAGAACTCCAGTGGCGGTGCAGGAGANAAGATTGTCCAAGAAGCGATTTAAGCAACGGTTTAACGCAGNAGTNGGTGCACTAATTGTTGCAACAAAATGGACTTTGTGAAACGACTTTNGTTACTACTTCGGCGTCATAGCTTTTACCCTATTTTACGTTGCGGTTGATACGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGGACTTATNGGCACGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGGCGGCGGTCATGCTACAACGGGTCTGNCGTGCNATCTGTCGGCAAATGCAATCGAATGCAGAAAGATTGCACCACGACGGTGCGTCAAGTGGAANCGACATCGGGTAACAGATATTGACNGNNCGGTAGGACGA]
consensusID : consensus_9695#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 720 fasta sequence
[CCGCCCACGCGTCCGTTTCAACCTGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA---GCTCACGAAATTAC-TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTA-TTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGT-CCCATCCCGTACGTCATCATACATCATTCGTACAGGGCCGGCGGCATGCTACAACGGGC]
[+] EMBL BM608067 [CCGCCCACGCGTCCGTTTCAACCTGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA GCTCACGAAATTAC TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTA TTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGT CCCATCCCGTACGTCATCATACATCATTCGTACA GGCCGGCGGCA ]
[+] EMBL BX603206 [ TGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCAGGCGCAGGCTACTAGATACCGCA ]
[+] EMBL BM582137 [ ccgCGGAGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTCCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA GCTCACGAAATTAC TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTA TTTTACGTTGCGGGTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGT CCCATCCCGTACGTCATCATACATCATTCGTACAGGGCGGGCGGCATGCTACAACGGGC]
[+] EMBL BM598242 [ ccgGCCATCCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATA GCTCACGAAATTAC TGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCCATCCCGTACGTCATCATACATCATTCGTACAGGGCCGGCGGCATGCTA ]
[+] EMBL BM590045 [ ccgCGCGATAATAAGTGCGCGTACTTGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTCGCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCTCTGTACGCAAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCTACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCTTATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACGCACCAACGCACACAACACCGTACAACAAATATACTCTCACAAAATTACGTGCTTTACCAGTCAAAACTGTACCTCCAGTGTGTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGG ]
consensusID : consensus_9695#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 572 fasta sequence
[CCGCCCACGCGTCCGGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGAAGATGCACCAGGACGTGCGTCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCGCGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCCCCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTAC]
[+] EMBL BM579608 [CCGCCCACGCGTCCGGCCCAAGAAGCGATTTAAGAACAGTTTAACGCAGAAGTTGGTGCAGTAATTGTTGCAACAAAATGGACTTTGTGAAAGACTTTTGTTACTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATAGTAAAGCATGTGACCCGGTGCCCTACGTGACGCGAGACTTTTGGAGTGCTCTGCCACCGAAACAGATCGAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGGCCGGCGGCATGCTACAACGGGCTGCAGTGCATCGCGGCAATGCAATCGATGCAGAAGATGCACCAGGACGTGCGTCAGTGGAACGACATCGGGTACAGCTTTGCGGTCGGTGGCGACGGGCGCGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACAACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCCCCGAAGAACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCACAGAACTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9695#1 ------TTGCCCCAGGTTTA--CTGCGC-GGAGC-ATCCGCGATAATAAGTGCGCGTACT 50
consensus_9695#3 CCGCCCACGCGTCCGTTTCAACCTGCGCCGGAGCCATCCGCGATAATAAGTGCGCGTACT 60
consensus_9695#2 -------------------------------------------------GCCCCGAGGTT 11
consensus_9695#0 ---------GAATCGGCACGAGGTGCGC-GGAGCCATCCGCGATAATAAGTGCGCGTACT 50
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 TGAGTGCGTACCACCGAACAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGATTC 110
consensus_9695#3 TGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTC 120
consensus_9695#2 ANAGTGCGTAC-ACCGACCAGTTGTGCGCCATCCCGTNCCGAACAAAAACAATACGTTTC 70
consensus_9695#0 TGAGTGCGTACCACCGACCAGTTGTGCGCCATCCCGTGCCGAACAAAAACAATACGTTTC 110
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 GCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCGCT-CTGTACGC 169
consensus_9695#3 GCGTTTCCACGCTATCAACAATCGCGTCGAGACCACGCGCGACACTGCTCT-CTGTACGC 179
consensus_9695#2 GCGTTTCCACGCTATCAACAATCGCGACGA--CCACGCGCGACACTGCTCTACTGTACGC 128
consensus_9695#0 GCGTTTCCACGCTATCAACAATCGCGACGA--CCACGCGCGACACTGCTCT-CTGTACGC 167
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 AAATAATTCGATCGAGTGGG--------------TTCGTTGTCAAGCTCACGCGCAGGCT 215
consensus_9695#3 AAATAATTCGATCGAGTGGGGCTGCTCTTTGGGTTGCGTTGTCAAGCTCACGCGCAGGCT 239
consensus_9695#2 AAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCT 188
consensus_9695#0 AAATAATTCGATCGAGGGGGGCTGCTCTTCGGGTTGCGTTGTCAAGCTCAGGCGCAGGCT 227
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 275
consensus_9695#3 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 299
consensus_9695#2 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 248
consensus_9695#0 ACTAGATACCGCACCTGCAGACAGACATGAAAGTGCAATCGGTAACCTTCCCGTGGTTCT 287
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 TATCCCGCCAGTAGTGACAGTGATTTATTTGCTGAACG-CACCAACGCACACAACACTGT 334
consensus_9695#3 TATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACG-CACCAACGCACACAACACCGT 358
consensus_9695#2 TATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACNGCACCAACGCACACAACACCGT 308
consensus_9695#0 TATCCCGACAGTAGTGACAGTGATTTATTTGCTGAACG-CACCAACGCACACAACACCGT 346
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 ACAACAAATAGCTC-ACGAAAATACTGCTTTACCAGTAAAAAAAACTGTACCTGCAGTGT 393
consensus_9695#3 ACAACAAATAGCTC-ACGAAATTACTGCTTTACCAGTCAAAA---CTGTACCTCCAGTGT 414
consensus_9695#2 ACAACAAATACCTCGACGAAAATACTGCTT----ATACAAAA------GAACTCCAGTG- 357
consensus_9695#0 ACAACAAATACCTC-ACGAAAATACTGCTT-----ATAAAAA-------AACTCCAGTG- 392
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 GTGTGTGTGT--CTGTGTGAAGAAAGATTGTCCAAAAAGCGATTTAAG-AACGGTTTAAC 450
consensus_9695#3 GTGTGTGTGTGTCTGTGTGAAGAAAGATTGCCCAAGAAGCGATTTAAG-AACAGTTTAAC 473
consensus_9695#2 ------GCGG---TGCAGGAGANAAGATTGTCCAAGAAGCGATTTAAGCAACGGTTTAAC 408
consensus_9695#0 ------GCG-----GTGAGGAGAAAGATTGTCCAAGAAGCGATTTCGG-AACGGTTTAAC 440
consensus_9695#4 --------------CCGCCCACGCGTCCGGCCCAAGAAGCGATTTAAG-AACAGTTTAAC 45
* **** ********* * *** *******
consensus_9695#1 GCAGAAGTTAGTGCACTAAATTGTTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 509
consensus_9695#3 GCAGAAGTTGGTGCAGTAA-TTGTTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 531
consensus_9695#2 GCAGNAGTNGGTGCACTAA-TTGTTGCAACAAAATGGACTTTGTGAAACGACTTTNGTTA 467
consensus_9695#0 GCAGAAGTTGGTGCACTAA-TTATTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 498
consensus_9695#4 GCAGAAGTTGGTGCAGTAA-TTGTTGCAACAAAATGGACTTTGTGAAA-GACTTTTGTTA 103
**** *** ***** *** ** ************************* ****** ****
consensus_9695#1 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 568
consensus_9695#3 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 590
consensus_9695#2 CTACTTCGGCGTCATAGCTTTTACCCTATTTTACGTTGCGGTTGATACGTAAAGCATGTG 527
consensus_9695#0 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 557
consensus_9695#4 CTACTTCGGCGTCATAGCATTTACCCTATTTTACGTTGCGGTTGATA-GTAAAGCATGTG 162
****************** **************************** ************
consensus_9695#1 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACAGATC 624
consensus_9695#3 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACAGATC 646
consensus_9695#2 ACCCGGTGCCCTACGTGACGCGAGGACTTATNGGCACGTGCTCTGCCACCGAAACAGATC 587
consensus_9695#0 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACGGATC 613
consensus_9695#4 ACCCGGTGCCCTACGTGACGCGAG-ACTTTTGGA---GTGCTCTGCCACCGAAACAGATC 218
************************ **** * * ****************** ****
consensus_9695#1 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGG-CCGGCGG- 682
consensus_9695#3 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGGGCCGGCGG- 705
consensus_9695#2 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGG--CGGCGGT 645
consensus_9695#0 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACCGG-CCGGCGG- 671
consensus_9695#4 GAACACTTCGCCGGTCCCATCCCGTACGTCATCATACATCATTCGTACAGG-CCGGCGG- 276
************************************************ ** ******
consensus_9695#1 CATGCTACAACGGG-CTGCAGTGCATCGCGGC----AATGCAATCGATGCAGGAAGATGC 737
consensus_9695#3 CATGCTACAACGGG-C-------------------------------------------- 720
consensus_9695#2 CATGCTACAACGGGTCTGNCGTGCNATCTGTCGGCAAATGCAATCGAATGCAGAAAGATT 705
consensus_9695#0 CATGCTACAACGGG-CTGCAGTGCATCGCGGC----AATGCAATCGATGCAGAAGA---T 723
consensus_9695#4 CATGCTACAACGGG-CTGCAGTGCATCGCGGC----AATGCAATCGATGCAGAAGA---T 328
************** *
consensus_9695#1 ACCCAGGGANCGTGCGTCAGT--GGAACGACAATCGGGTACAGCTTTGCGGTCGGTGGCA 795
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 GCACCACGACGGTGCGTCAAGTGGAANCGACATCGGGTAACAGATATTGACNGNNCGGTA 765
consensus_9695#0 GCACCAGGACGA-GCGCCAGT--GGAACGACATCGGGT-ACAGCTTTGCGGTCGGTGGCG 779
consensus_9695#4 GCACCAGGAC-GTGCGTCAGT--GGAACGACATCGGGT-ACAGCTTTGCGGTCGGTGGCG 384
consensus_9695#1 GACGGGCCGCGTTGTACCAGGGGCCGGGGGATTCAACT---------------------- 833
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 GGACGA------------------------------------------------------ 771
consensus_9695#0 ACGGGCACGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACA 839
consensus_9695#4 ACGGGCGCGTGTACCAGGGCCGGGGATTCAATGTGATTGGCGCTCATGCGCCCCGATACA 444
consensus_9695#1 ------------------------------------------------------------
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 ------------------------------------------------------------
consensus_9695#0 ACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCACCGAAGA 899
consensus_9695#4 ACAACCGCAGCGTTGGGATCTGTCTGATCGGTGATTGGGTTGCGGATTTGCCCCCGAAGA 504
consensus_9695#1 ------------------------------------------------------------
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 ------------------------------------------------------------
consensus_9695#0 ACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCAC 959
consensus_9695#4 ACATGCTCACGGCCGCCCAAAACCTCATCGAGTATGGTGTCCGGAATGGGCTGATTGCAC 564
consensus_9695#1 ------------------------------------------------------------
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 ------------------------------------------------------------
consensus_9695#0 AGAACTACACCTTGCTGGGGCATCGGCAGGTACGCACGACCGAATGTCCGGGCGATCGGC 1019
consensus_9695#4 AGAACTAC---------------------------------------------------- 572
consensus_9695#1 ------------------------------------------------------------
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 ------------------------------------------------------------
consensus_9695#0 TGTTCGAGGAGATCAAAACCTGGCCCCATTTCGATCCGATGACGGACATTGTCGATCAGA 1079
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 ------------------------------------------------------------
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 ------------------------------------------------------------
consensus_9695#0 AAAGTGTTTGACAGTGGCGAACGGAACCGGCCCCTACATGCTACAAGTATTGAAGAAACT 1139
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 ------------------------------------------------------------
consensus_9695#3 ------------------------------------------------------------
consensus_9695#2 ------------------------------------------------------------
consensus_9695#0 CTTAAATAGCTTATTAACGTGCGCTACCTCTCCTTTGCATACGGTAACCATCATGTTCCT 1199
consensus_9695#4 ------------------------------------------------------------
consensus_9695#1 -----------------------------------------------
consensus_9695#3 -----------------------------------------------
consensus_9695#2 -----------------------------------------------
consensus_9695#0 AAAGTGTGTGTTTTTTGTAATAAAACCATTCAANACCTTAAAAAAAA 1246
consensus_9695#4 -----------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||