These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1929 fasta sequence [CCGCGTGTGTGCAGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT-CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCAATTTCAACCAATTTA-CAATTTCCTTT-CCTTTGTTTGAT-GCGCAAGCGATGAC-AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCA----CACAC--ACACAATTCTATTCAGACCTTCCT-CCCCCCTAATAC-GGGTCCATATGTGTACTCTATACAGCAACGTATTCGG] [+] EMBL BM583096 [CCGCGTGTGTGCAGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAAGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGAT ] [+] EMBL BX607732 [ CGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAA ] [+] EMBL AGA281993 [ CAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCGCCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTAATTGACGCGTG ] [+] EMBL BX613297 [ CGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCACAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGC AGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCG ] [+] EMBL BM581884 [ ccgCCGGGCCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGATCCCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGG ] [+] EMBL BX627382 [ GACGTCGGCCGCGAGCAGCGCGGAGGACAATGCGCGCAAGGTGCAACAGTACAAAGACAACCTGATCAGCCGCGCCGAAACACTCATCACGAAAGAGTTCCCCGAGCGGATCGTGCGCCTGAACGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCA ] [-] EMBL AGA280297 [ AGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCTGAACATTCCAGTCCCGGAACCGAT CCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTTCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTC ] [+] EMBL BX607280 [ CTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCC CTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAA ] [+] EMBL BX617802 [ GGAGGAAGGCAGTGAGCGGAAGCGTCCCCGGCTCAACTCGAACACGCCCAGTCCGGCGGCAACGGTCGACGGCAACGGCACGAAGGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAA ] [+] EMBL BX608735 [ cCTGCATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGATCTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGACACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCAATTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTC ] [+] EMBL AGA281495 [ GACCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCT ] [+] EMBL AGA280699 [ CCAGATCTCGCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCCAAGGTGGCCAAATACCCGCACATCGACGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCG ] [+] EMBL BX615948 [ GGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGTGCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCAATTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCAT ] [+] EMBL BM615401 [ ccgGCACGACATCGTCATCAAGAACATGGAGAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAACAACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCCCAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCAGTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTGGCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTTCCCCTTTCCCGCTATCATTTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAGGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCA CACAC ACACAATTCTATTCAGACCTTCCTCCCCCCCTAATACGGGGTCCATATGTGTACTCTATACAGCAACGTATTCGG] [-] EMBL AGA282319 [ TCAATTTCAACCAATTTA CAATTTCCTTT CCTTTGTTTGAT GCGCAAGCGATGAC AAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCA CACAC ACACAATTNTATTCAGACCTTCCT CCCCCCTAATAC GGGTCCAT ] [-] EMBL CNS09I7O [ TCAACCAATTTAGCAATTTCCTTTGCCTTTGTTTGATGGCGCAAGCGATGACGGAGAACAACAAAAGTGAAATCCCTAATATGGTGCCACTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTGGATTTTTATCACACCATCCACACCCACACCCACACAAACACAATTCTAATCAGACCTTC ] [-] EMBL AGA283091 [ AAAAGTGAAATCCCTAATATGGTGCAAKTCCCGTAAATCCCGTCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGscttg ] consensusID : consensus_9699#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 751 fasta sequence [CGAGGTTAAAGCAAACTCGACGAGCGGTCAGCGANGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTACGCTGTCCCAAGGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACAAACACCGTGTGTGTGTGTGTGTGTGTGTCAGGTGGAAGTGTGTGTGTGTCTGTAGTGTGTCAGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTANATTGACCGCGTGCAAAGCGTTCCGCAGTTAGCGGAGGGACCATATTTGCGCAAGGGCAANACTTCCAGAANNCCCCTCTCATCCCTGGGCCGGGCCGTACGCCATCAAGCGGCAGCGCCTCGCAGCTAATCAAACAANCAACGACGGCTGACGCCACACAATGGAGCCGAAAAGGCAACATTCGGAACCGCGACGACGTCGTGGCCGCGAGCAGATGCGGAGGGACAATGCGCGCAAGGTGCACCAGTACANNAGACAACNTGATCCAGGCCGCGCCGAAACACTCATCACGCAAAAGAGTTCCCGCAGCGGGATCA] [+] EMBL AL693069 [CGAGGTTAAAGCAAACTCGACGAGCGGTCAGCGANGACGAGCTACTTGGACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTACGCTGTCCCAAGGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACAAACACCGTGTGTGTGTGTGTGTGTGTGTCAGGTGGAAGTGTGTGTGTGTCTGTAGTGTGTCAGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCTGAACGGTCTCGAGACTANATTGACCGCGTGCAAAGCGTTCCGCAGTTAGCGGAGGGACCATATTTGCGCAAGGGCAANACTTCCAGAANNCCCCTCTCATCCCTGGGCCGGGCCGTACGCCATCAAGCGGCAGCGCCTCGCAGCTAATCAAACAANCAACGACGGCTGACGCCACACAATGGAGCCGAAAAGGCAACATTCGGAACCGCGACGACGTCGTGGCCGCGAGCAGATGCGGAGGGACAATGCGCGCAAGGTGCACCAGTACANNAGACAACNTGATCCAGGCCGCGCCGAAACACTCATCACGCAAAAGAGTTCCCGCAGCGGGATCA] consensusID : consensus_9699#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence [CCGCCCACGCGTCCGGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTGTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCCGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCGCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACATGCGCGCAAGGTGCAACAGTAC] [+] EMBL BM615733 [CCGCCCACGCGTCCGGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGGACGCAGCTTTTCCCTTGTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGCTGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAAATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGTCGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTCGTGTGCGCACCGTGTCAGCTTACGTCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGGTGGCAACAGCGCCGAACGGTCTCGAGACTAATTGACGCGTGCAAGCGTTCCGCGTTAGCGGCGGGACCATATTGCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCCGGGCCGGGCCGCACGCCCATCAACCGGCAGCCGCCTCGCAGCAATCAACAACACGACGCGACGCAACAATGAGCGAAAGCACATCGACCGCGACGACGTCGGCCGCGAGCAGCGCGGAGGACATGCGCGCAAGGTGCAACAGTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9699#0 --CCGCGTGTGTGCAGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGG 58 consensus_9699#2 CCGCCCACGCGTCCGGCAAAGCAAAACTCGACGAGCGGTCAGCGACGACGAGCTACTTGG 60 consensus_9699#1 -----------CGAGGTTAAAGCAAACTCGACGAGCGGTCAGCGANGACGAGCTACTTGG 49 * ** ********************** ************** consensus_9699#0 ACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGC 118 consensus_9699#2 ACGCAGCTTTTCCCTTGTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGC 120 consensus_9699#1 ACGCAGCTTTTCCCTTCTCGGCACAACCGTACACGTTTTTTTGCACTTTTCTTTTGTTGC 109 **************** ******************************************* consensus_9699#0 TGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAA 178 consensus_9699#2 TGTGCGCTGTCCCAAAGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAA 180 consensus_9699#1 TGTACGCTGTCCCAAGGCAGCCGGCTCCCGGTCCAGGTGGCAACCGTTTTGCGACGCAAA 169 *** *********** ******************************************** consensus_9699#0 ATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGT 238 consensus_9699#2 ATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGT 240 consensus_9699#1 ATATCACCAGCCAAAGGTGGTGTACACCAGTGAGCGCCGCGTGGTAGTGTTTCCGCTCGT 229 ************************************************************ consensus_9699#0 CGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGTGTG 298 consensus_9699#2 CGACGCGCCTCCATCCCCTCGACAGACCAAACACCGTGTGTGTGTGTGTGTGTGTGT--- 297 consensus_9699#1 CGACGCGCCTCCATCCCCTCGACAGAC-AAACACCGTGTGTGTGTGTGTGTGTGTGT--- 285 *************************** ***************************** consensus_9699#0 TGTCGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTC-GTGTGCGCGCCGTGTCAGCTTACG 357 consensus_9699#2 ---CGGTGGAAGTGTGTGTGTGTTTGTTGTGTGTC-GTGTGCGCACCGTGTCAGCTTACG 353 consensus_9699#1 --CAGGTGGAAGTGTGTGTGTGTCTGTAGTGTGTCAGTGTGCGCACCGTGTCAGCTTACG 343 ******************* *** ******* ******** *************** consensus_9699#0 TCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCAGAAGAAACCGGAGCCGGG 417 consensus_9699#2 TCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGG 413 consensus_9699#1 TCGTTCCGGGGACCGTTTCCGGAGACCGACAGGCTCGAGCCGGAAGAAACCGGAGCCGGG 403 ***************************************** ****************** consensus_9699#0 TGGCAACAGCGCTGAACGGTCTCGAGACTAA-TTGAC-GCGTGCAA-GCGTTCCGC-GTT 473 consensus_9699#2 TGGCAACAGCGCCGAACGGTCTCGAGACTAA-TTGAC-GCGTGCAA-GCGTTCCGC-GTT 469 consensus_9699#1 TGGCAACAGCGCTGAACGGTCTCGAGACTANATTGACCGCGTGCAAAGCGTTCCGCAGTT 463 ************ ***************** ***** ******** ********* *** consensus_9699#0 AGCGGCGGGACCATATT-GCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCC-GGG 531 consensus_9699#2 AGCGGCGGGACCATATT-GCGCAAGGGCAACACTTCCAGCAACCCCCTCTCATCCC-GGG 527 consensus_9699#1 AGCGGAGGGACCATATTTGCGCAAGGGCAANACTTCCAGAANNCCCCTCTCATCCCTGGG 523 ***** *********** ************ ******** * ************* *** consensus_9699#0 CCGGGCCTCACGCCCATCAACCGGCAGCCGCCTCGCAGC-AATCAA-CAAC--ACGACG- 586 consensus_9699#2 CCGGGCCGCACGCCCATCAACCGGCAGCCGCCTCGCAGC-AATCAA-CAAC--ACGACG- 582 consensus_9699#1 CCGGGCCGTACGCC-ATCAAGCGGCAGC-GCCTCGCAGCTAATCAAACAANCAACGACGG 581 ******* ***** ***** ******* ********** ****** *** ****** consensus_9699#0 -CGACGCAACA--ATGAG--CGAAAGCACATCG------ACCGCGACGACGTCG--GCCG 633 consensus_9699#2 -CGACGCAACA--ATGAG--CGAAAGCACATCG------ACCGCGACGACGTCG--GCCG 629 consensus_9699#1 CTGACGCCACACAATGGAGCCGAAAAGGCAACATTCGGAACCGCGACGACGTCGTGGCCG 641 ***** *** *** ***** ** * *************** **** consensus_9699#0 CGAGCAG-CGCGGAGG-ACAATGCGCGCAAGGTGCAACAGTACAAA-GACAACCTGATC- 689 consensus_9699#2 CGAGCAG-CGCGGAGG-ACA-TGCGCGCAAGGTGCAACAGTAC----------------- 669 consensus_9699#1 CGAGCAGATGCGGAGGGACAATGCGCGCAAGGTGCACCAGTACANNAGACAACNTGATCC 701 ******* ******* *** *************** ****** consensus_9699#0 -AGCCGCGCCGAAACACTCATCACG--AAAGAGTTCCCCGAGCGG-ATCGTGCGCCTGAA 745 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 AGGCCGCGCCGAAACACTCATCACGCAAAAGAGTTCCCGCAGCGGGATCA---------- 751 consensus_9699#0 CGCCCTGCTCGACACGCCGCAGTTCTCCGAGCGCAGCTTCACCGACGTCTATCAGGAGCT 805 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GAACATTCCAGTCCCGGAACCGATCCTGGTGGAAGGGGAGGAAGGCAGTGAGCGGAAGCG 865 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 TCCCCGGCTCAACTCGAACACGCCCAGCCCGGCGGCAACGGTCGACGGCAACGGCACGAA 925 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GGTGCACGCCCTGCCGACCGGGCGGGTCGAGTGCAACAAACCGATCGGCGAGCTGGTCTG 985 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 CATCGTGAAGCCGATCATCCGCGCGCTGGTGGAGGACTCGAATCTGCTCAAGATGTGGAT 1045 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 CTCCTTCATGATACCGAAGATCGAGGACGGCAACAACTTCGGCGTCTCGATCCAGGAGGA 1105 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 CACGCTGGCCGAGATCCAGTCGGTCGAGACGGAGGCGGCCGCCTTCTTCGACCAGATCTC 1165 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GCGCTACTTCGTGTCGCGCGCGAAGGTGGTGTCGAAGGTGGCCAAATACCCGCACATCGA 1225 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 CGACTACCGGCGGGCGGTCGCCGAGCTGGACGAGAAGGAGTTTCTCAGCCTGTGGCTGGT 1285 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GCTGAGCGAGATCCGGAATCGCTACTGCTCGCTGCACGACATCGTCATCAAGAACATGGA 1345 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GAAGCTGAAGAAACCCCGCTCCTCCAATGCGGACAGTTTGTACTAAAAACAACAACCAAC 1405 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 AACAAATGGGGGAGGGAAAGGGTTTTTGTTGACCTCGGTCACACTGTTCCCACCACTCCC 1465 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 CAGCACCCTTCTACTTCTTTTCTGAAACAAAAACACACACACACCCAAACACACGTGCCA 1525 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GTGGGTGTATTTGGGCTCCGCTGATCACTCTGATCTGCAAAAGCTGCATCTTGGCGGCTG 1585 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GCAATTAAAACTCCGCAATTCACGAAGATATCGCATGACAGCACATGCCGGTATGTTCTT 1645 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 CCCCTTTCCCGCTATCAATTTCAACCAATTTACAATTTCCTTTCCTTTGTTTGATGCGCA 1705 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 AGCGATGACAAGAACAACAAAAGTGAAATCCCTAATATGGTGCAACTCCCGTAAATCCCG 1765 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 TCTCGTAAATCGTAACCGCCAGGGAAGCGACAATGATGGTCTGAAGATACGGTGTCTTTG 1825 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 GATTTTTATCACACCATCCACACCCACACACACACAATTCTATTCAGACCTTCCTCCCCC 1885 consensus_9699#2 ------------------------------------------------------------ consensus_9699#1 ------------------------------------------------------------ consensus_9699#0 CTAATACGGGTCCATATGTGTACTCTATACAGCAACGTATTCGG 1929 consensus_9699#2 -------------------------------------------- consensus_9699#1 -------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||