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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9711#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1583 fasta sequence
[TTTTTTTTCGTTTTTTCCAGCCCTTATTTATGACTTTATTTTTGTCGTTTAACCCCCGATTTGTTCTGCCTAATTTGCTTATCAGCAATTTGTCAACACTTCAAAACAATTACTCTACCCCACACGGAACAAAAAATCCAATTTTCGGTCCTGTCAAACAAAGGCTAACCAACCGTAACGCTTCCGCTGTTGTGCACTATCGCTCCGTGCCGTCCGCGGTCAAGTGCGCTCGCGTGCCCCAGTCCGGGCGCTTATCAGTACGAGCCCTCGAGTTGGCCTACATTTGTTGCGCGAATGTGCGCGAAAAGTAAACGCAAATCGAACTCTATCGGTGGTGGTGGTGGTGTGTAGTGTTGTTGTTTGTGGCCGTCTTACTGCTGCCCTCTATCAAGGTTTTGTTTATTCTGCTCGCCCCACATGCCGCTTCACTTCCTTCGATGCACTTTAGTCGCTTCCTGCTCCTTAATCGCGACCGAACTTGTGCGTGTTGACCGGCTTGTCGACACGCACGATCCGC-TCGCCCGCCACAAAGTACCCCTCGTACTCGACCGTCTCGGGCGTCGTGTCGATATGGTAGTGGCCACCATGGCCGTGCGTGGAAAAGCTGTGGAAATGCTGCAGCCGCAGATCCAGCTCGCACTCGTTCGTGACCAGCGTGCCGACGTTCACGAGCGGCGCCGGCATGTCGTAAAAGTTGAGCCACTCGTTCAGCTGCTCCTCCGTGTGGATCGGCTTGGTAGAGAACGGTGACATGACGTGCTGCTTCGCTTTGCCCTCCCGCAGCAGAAAGACACCGCCCAGCCCTACCGCCCGTTCGCCGTACCGATCGTCCAGACAGGTGCGAATGCTCGCAATGAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGGCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTAAAGCTTGGTACGATCGACCACGGGCAGTAGGTAGGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTGTGCAACCGATCGTCGCGGGATGTGACCTCCCTCCCAGTGCTTCCCAGGAAACTGCGGACGCGATCGCGAGCGCGGTTGTTTATTCACTAGTTCTGCTTCTTATTCCCCATACACCGG]
[+] EMBL AGA283669 [TTTTTTTTCGTTTTTTCCAGCCCTTATTTATGACTTTATTTTTGTCGTTTAACCCCCGATTTGTTCTGCCTAATTTGCTTATCAGCAATTTGTCAACACTTCAAAACAATTACTCTACCCCACACGGAACAAAAAATCCAATTTTCGGTCCTGTCAAACAAAGGCTAACCAACCGTAACGCTTCCGCTGTTGTGCACTATCGCTCCGTGCCGTCCGCGGTCAAGTGCGCTCGCGTGCCCCAGTCCGGGCGCTTATCAGTACGAGCCCTCGAGTTGGCCTACATTTGTTGCGCGAATGTGCGCGAAAAGTAAACGCAAATCGAACTCTATCGGTGGTGGTGGTGGTGTGTANTGTTGTTGTTTGTGGCCGTCTTACTGCTGCCCTCTATCAAGGTTTTGTTTATTCTGCTCGCCCCACATG ]
[+] EMBL AGA284113 [ ttTTTTTTCCAGCCCTTATTTATGACTTTATTTTTGTCGTTTAACCCCCGATTTGTTCTGCCTAATTTGCTTATCAGCAATTTGTCAACACTTCAAAACAATTACTCTACCCCACACGGAACAAAAAATCCAATTTTCGGTCCTGTCAAACAAAGGCTAACCAACCGTAACGCTTCCGCTGTTGTGCACTATCGCTCCGTGCCGTCCGCGGTCAAGTGCGCTCGCGTGCCCCAGTCCGGGCGCTTATCAGTACGAGCCCTCGAGTTGGCCTACATTTGTTGCGCGAATGTGCGCGAAAAGTAAACGCAAATCGAACTCTATCGGTGGTG ]
[-] EMBL BM644674 [ CAATTACACTACCCCA ACGGAACAAAAATTTCAATTTTCGGGCCTGTCAAACAAAGGCTAACCAACCGTAACGCTTCCGCTGGTGCGCACTATCGCTCCGTGCCGTCCGCGGTCAAGTGCGCTag ]
[-] EMBL BM625596 [ ACACTACCCCA ACGGAACAAAAATTTCAATTTTCGGGCCTGTCAAACAAAGGCTAACCAACCGTAACGCTTCCGCTGGTGCGCACTATCGCTCCGTGCCGTCCGCGGTCAAGTGCGCTCGCGTGCCCCAGTCCGGGCGCTTATCAGTACGAGCCCTCGAGTTGGCCTACATTTGTTGCGCGAATGTGCGCGAAAAGTAAACGCAAATCGAACTCTATCGGTGGTGGTGGTGGTGTGTAGTGTTGTTGTTTGTGGCCGTCTTACTGCTGCCCTCTATCAAGGTTTTGTTTATTCTGCTCGCCCCACATGCCGCTTCACTTCCTTCGATACACTTTAGTCGCTTCCTGCTCCTTAATCGCGGCCGAACTTGTGCGTGTTGACCGGCTTGTCGACACGCACGATCCGC TCGCCCGCCACAAAGTACCCCTCGTACTCGACCGTCTCGGGCGTCGTGTCGATATGGTAGTGGCCACCATGGCCGTGCGTGGAAAAGCTGTGGAAATGCTGCAGCCGCAGATCCAGCTCGCACTCGTTCGTGACCAGCGTGCCGACGTTCACGAGCGGCGCCGGCATGTCGTAAAAGTTGAGCCACTCGTTCAGCcgg ]
[-] EMBL AGA284957 [ AGTGTTGTTGTTTGTGGCCGTCTTACTGCTGCCCTCTATCAAGGTTTTGTTTATTCTGCTCGCCCCACATGCCGCTTCACTTCCTTCGATGCACTTTAGTCGCTTCCTGCTCCTTAATCGCGACCGAACTTGTGCGTGTTGACCGGCTTGTCGACACGCACGATCCGC TCGCCCGCCACAAAGTACCCCTCGTACTCGACCGTCTCGGGCGTCGTGTCGATATGGTAGTGGCCACCATGGCCGTGCGTGGAAAAGCTGTGGAAATGCTGCAGCCGCAGATCCAGCTCGCACTCGTTCGTGACCAGCGTGCCGACGTTCACGAGCGGCGCCGGCATGTCGTAAAAGTTGAGCCACTCGTTCAGCTGCTCCTCCGTGTGGATCGGCTTGGTAGAGAACGGTGACATGACGTGCTGCTTCGCTTTGCCC ]
[-] EMBL BX621510 [ CCTCTATCAAGGTTTTGTTTATTCTGCTCGCCCCACATGCCGCTTCACTTCCTTCGATGCACTTTAGTCGCTTCCTGCTCCTTAATCGCGACCGAACTTGTGCGTGTTGACCGGCTTGTCGACACGCACGATCCGCTTCGCCCGCCACAAAGTACCCCTCGTACTCGACCGTCTCGGGCGTCGTGTCGATATGGTAGTGGCCACCATGGCCGTGCGTGGAAAAGCTGTGGAAATGCTGCAGCCGCAGATCCAGCTCGCACTCGTTCGTGACCAGCGTGCCGACGTTCACGAGCGGCGCCGGCATGTCGTAAAAGTTGAGCCACTCGTTCAGCTGCTCCTCCGTGTGGATCGGCTTGGTAGAGAACGGTGACATGACGTGCTGCTTCGCTTTGCCCTCCCGCAGCAGAAAGACACCGCCCAGCCCTACCGCCCGTTCGCCGTACCGATTGTCCAGACAGGTGCGAATGCTCGCAATAAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGcct ]
[-] EMBL BM622708 [ TGTGCGTGTTGACCGGCTTGTCGACACGCACGATCCGCTTCGCCCGCCACAAAGTACCCCTCGTACTCGACCGTCTCGGGCGTCGTGTCGATATGGTAGTGGCCACCATGGCCGTGCGTGGAAAAGCTGTGGAAATGCTGCAGCCGCAGATCCAGCTCGCACTCGTTCGTGACCAGCGTGCCGACGTTCACGAGCGGCGCCGGCATGTCGTAAAAGTTGAGCCACTCGTTCAGCTGCTCCTCCGTGTGGATCGGCTTGGTTGAGAACGGTGACATGACGTGCTGCTTCGCTTTGCCCTCCCGCAGCAGAAAGACACCGCCCAGCCCTACCGCCCGTTCGCCGTACCGATCGTCCAGACAGGTGCGAATGCTCGCAATGAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCCTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGGCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCcgg ]
[-] EMBL BM645681 [ TGTCGATATGGTAGTGGCCACCATGGCCGTGCGTGGAAAAGCTGTGGAAATGCTGCAGCCGCAGATCCAGCTCGCACTCGTTCGTGACCAGCGTGCCGACGTTCACGAGCGGCGCCGGCATGTCGTAAAAGTTGAGCCACTCGTTCAGCTGCTCCTCCGTGTGGATCGGCTTGGTTGAGAACGGTGACATGACGTGCTGCTTCGCTTTGCCCTCCCGCAGCAGAAAGACACCGCCCAGCCCTACCGCCCGTTCGCCGTACCGATCGTCCAGACAGGTGCGAATGCTCGCAATGAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCCTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGGCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTAAAGCTTGGcgg ]
[-] EMBL BX625766 [ TCGTAAAAGTTGAGCCACTCGTTCAGCTGCTCNTCCGTGTGGATCGGCTTGGTAGAGAACGGTGACATGACGTGNTGCTTCGCTTTGCCCTCCCGCAGCAGAAAGNCACCGCCCAGCCNTACCGCCCGTTCGCCGTACCGATTGTCCAGACAGGTGCGAATGCTCGCAATAAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGTCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGT ]
[-] EMBL BM654307 [ GCCCAGCCCTACCGCCCGTTCGCCGTACCGATCGTCCAGACAGGTGCGAATGCTCGCAATGAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGTACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGGCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGTGCGCGTTTGGTGACGGACACGAGATCGTAAAGCTTGGTACGATCGACCACGGGCAGTAGGTAGGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTGTGCAACCGATCGg ]
[-] EMBL BM642809 [ ACCGCCCGTTCGCCGTACCGATCGTCCAGACAGGTGCGAATGCTCGCAATGAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGTACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGGCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGTGCGCGTTTGGTGACGGACACGAGATCGTAAAGCTTGGTACGATCGACCACGGGCAGTAGGTAGGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTGTGCAACCGATCGTCGCCGG ]
[-] EMBL BM603463 [ TCGCAATGAAGTCCTTGTTGCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGTACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGGCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGTGCGCGTTTGGTGACGGACACGAGATCGTAAAGCTTGGTACGATCGACCACGGGCAGTAGGTAGGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTGTGCAACCGATCGTCGg ]
[-] EMBL BM600543 [ GAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGTACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGGCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGTGCGCGTTTGGTGACGGACACGAGATCGTAAAGCTTGGTACGATCGACCACGGGCAGTAGGTAGGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTGTGCAACCGATCGTCGCGGAATGTGACCTCCCTCCCAGTGCTTCCCAGGAAACTGCGGACGCGATCGCGAGCGCGGTTGTTTATTCACTAGTTCTGCTTCTTATTCCCCATACACCGG]
[-] EMBL BM639248 [ GACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGTCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTGTGCAACCGATCGTCGCGGcgg ]
[-] EMBL BM653207 [ GGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTAAAACTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCGATCAGCGCGGGCGTTCCGTTTAAACCAGATCCGGCCAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGg ]
consensusID : consensus_9711#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 988 fasta sequence
[GGGGTTCAGTGAAAANGGGGTAATNGGCCAACTAANGGGCCCGGTGGGTTGGAAAAACTGTGTGGGAAATTGGNGACAAACCGAGAGATTCAGGTTTGNCAAATTTCGTTCGTTGAACCAAGCGGTGCCCGAGACGGTTTCAACGGAAGTCGGGTCCCGGGCAATTGTTCGGTAAAAAAGTTTTGGAGCCCAAATTCGTTCAACTTGCTCCTTCGTGTGGATCGGCATGGTAGAGAACGGTGACATGGACGGTGCCTGCTTTCGCTTTTGCCCTCCCCGCAGCAAGAAAGAACAACCCGCCCAGCCCTACCGCCCCGTTCGCCCGTACCGATTGTCCAGACAGGTGCGAATGCTCGCAATAAAGTCCTTGTTGCCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCG-TTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGTCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTCCTCGTGGCCGATTCTG]
[-] EMBL BX467342 [GGGGTTCAGTGAAAANGGGGTAATNGGCCAACTAANGGGCCCGGTGGGTTGGAAAAACTGTGTGGGAAATTGGNGACAAACCGAGAGATTCAGGTTTGNCAAATTTCGTTCGTTGAACCAAGCGGTGCCCGAGACGGTTTCAACGGAAGTCGGGTCCCGGGCAATTGTTCGGTAAAAAAGTTTTGGAGCCCAAATTCGTTCAACTTGCTCCTTCGTGTGGATCGGCATGGTAGAGAACGGTGACATGGACGGTGCCTGCTTTCGCTTTTGCCCTCCCCGCAGCAAGAAAGAACAACCCGCCCAGCCCTACCGCCCCGTTCGCCCGTACCGATTGTCCAGACAGGTGCGAATGCTCGCAATAAAGTCCTTGTTGCCCGGTGCGCTTTGTGCAGCTTACCTTCAGCACGGGCCCAGCG TTTCCTTCCGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGTCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAATGCCTTTCCGTGTCCGTGCTCCTCGTGGCCGATTCTG]
[-] EMBL BX601812 [ CCAGCGTTTTCCTTCAGCAACGAGCAGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTGGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGTCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAG ]
[-] EMBL AGA285410 [ AGATTGGCCAGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAACCTCCCGCTCGGCCGTCACCATTGCCAGGTGGCTTTCACTCACGACCGTGCCCGGGGGGCTGTAGCGCAGGTTGAACATGCCCTCGCAGTTCGAGCTGACCAGCGGGAACGGTCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCAATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGA ]
[-] EMBL BM640728 [ GTGTCGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTCAATCAGAGCGGGCGTTCCATTTAAGCCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATACGGACACTCTACCACTTCCACGATACCCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCA ]
consensusID : consensus_9711#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 724 fasta sequence
[CTCAAAAAAAAGGGGGGGGAAAAAAATTTTTCCCCAAAAAAAAAAATTTCCCCTTTATTTTCCCGGGGGGGCCCTTTTTTTGGGGAAGGGTTTTTCCTTTTAAAAACCGGGGGGCCCCAAGGGGTTTTCCCCCCCCCCCCAAAAAAAACCCAAAATTTTGGCCAACCCAGGGCCCCCCAAGGGGGGTTTTTTGGGTGGGTGGGGGGATTTTTGGGGCCCCCAAAAAACTTTCCCGTTTGGGCCGGTCACCATTGCCAGGGTGCTTTCCACTCACGGACCGTGCCCGGGGGGGCTTTAGGGCCAGGTTGAACATGCCCTTCGCAGTTGGAGTTGACCAGCGGGAACGGGCCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGTAGTAGGTAGGGTGGTCCCCCGATTTCGATCAGCGCGGGCGTTCCGTTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTGTCGAGACTCTCCATCGTGCAATGCGAGCGAAATGTCTTTCCGCGGACGCGTGGGCGG]
[-] EMBL BM657775 [CTCAAAAAAAAGGGGGGGGAAAAAAATTTTTCCCCAAAAAAAAAAATTTCCCCTTTATTTTCCCGGGGGGGCCCTTTTTTTGGGGAAGGGTTTTTCCTTTTAAAAACCGGGGGGCCCCAAGGGGTTTTCCCCCCCCCCCCAAAAAAAACCCAAAATTTTGGCCAACCCAGGGCCCCCCAAGGGGGGTTTTTTGGGTGGGTGGGGGGATTTTTGGGGCCCCCAAAAAACTTTCCCGTTTGGGCCGGTCACCATTGCCAGGGTGCTTTCCACTCACGGACCGTGCCCGGGGGGGCTTTAGGGCCAGGTTGAACATGCCCTTCGCAGTTGGAGTTGACCAGCGGGAACGGGCCCGGCACCGGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACACGAGATCGTACAGCTTGGTACGATCGACCACGGGTAGTAGGTAGGGTGGTCCCCCGATTTCGATCAGCGCGGGCGTTCCGTTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAAATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGCAAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAGCTTGGCCGTGTCGAGACTCTCCATCGTGCAATGCGAGCGAAATGTCTTTCCGCGGACGCGTGGGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9711#0 TTTTTTTTCGTTTTTTCCAGCCCTTATTTATGACTTTATTTTTGTCGTTTAACCCCCGAT 60
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 TTGTTCTGCCTAATTTGCTTATCAGCAATTTGTCAACACTTCAAAACAATTACTCTACCC 120
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 CACACGGAACAAAAAATCCAATTTTCGGTCCTGTCAAACAAAGGCTAACCAACCGTAACG 180
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 CTTCCGCTGTTGTGCACTATCGCTCCGTGCCGTCCGCGGTCAAGTGCGCTCGCGTGCCCC 240
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 AGTCCGGGCGCTTATCAGTACGAGCCCTCGAGTTGGCCTACATTTGTTGCGCGAATGTGC 300
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 GCGAAAAGTAAACGCAAATCGAACTCTATCGGTGGTGGTGGTGGTGTGTAGTGTTGTTGT 360
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 TTGTGGCCGTCTTACTGCTGCCCTCTATCAAGGTTTTGTTTATTCTGCTCGCCCCACATG 420
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 CCGCTTCACTTCCTTCGATGCACTTTAGTCGCTTCCTGCTCCTTAATCGCGACCGAACTT 480
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 GTGCGTGTTGACCGGCTTGTCGACACGCACGATCCGCTCGCCCGCCACAAAGTACCCCTC 540
consensus_9711#1 --------------------------------GGGGTTCAGTGAAAANGGGGTAATNGGC 28
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 GTACTCGACCGTCTCGGGCGTCGTGTCGATATGGTAGTGGCCACCATGGCCGTGCGTGGA 600
consensus_9711#1 CAACTAANGGGCCCGGTGGGT--TGGAAAAACTGTGTGGGAAATTGGNGACAAACCGAGA 86
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 AAAGCTG--TGGAAATGCTGCAGCCGCAGATCCAGCTCGCACTCGTT-CGTGACCAGCGT 657
consensus_9711#1 GATTCAGGTTTGNCAAATTTCGTTCGTTGAACCAAGCGGTGCCCGAGACGGTTTCAACGG 146
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 GCCGACGTTCACGAGCGGCGCCGGCATGTCGTAAAAGTT---GAGCC---ACTCGTTCAG 711
consensus_9711#1 AAGTCGGGTCCCG---GGCAATTGTTCGGTAAAAAAGTTTTGGAGCCCAAATTCGTTCAA 203
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 CT-GCTCCTCCGTGTGGATCGGCTTGGTAGAGAACGGTGACATGAC--GTGC-TGCTT-C 766
consensus_9711#1 CTTGCTCCTTCGTGTGGATCGGCATGGTAGAGAACGGTGACATGGACGGTGCCTGCTTTC 263
consensus_9711#2 ----------------------CTCAAAAAAAAGGGGGGGGAAAAA-------------A 25
* * * * ** * *
consensus_9711#0 GCTTT-GCCCTCCC-GCAGCAGAAAGACAC----CGCCCAGCCCTACCGCCC-GTTCGCC 819
consensus_9711#1 GCTTTTGCCCTCCCCGCAGCAAGAAAGAACAACCCGCCCAGCCCTACCGCCCCGTTCGCC 323
consensus_9711#2 ATTTT-----TCCC--CAAAAAAAAAAATT-------TCCCCTTTATTTTCC----CGGG 67
*** **** ** * ** * * ** ** **
consensus_9711#0 -GTACCGATCGTCCAGACAGGTGCGAATGCTCGCAATGAAGTCCTTGTTGCC-GGTGCGC 877
consensus_9711#1 CGTACCGATTGTCCAGACAGGTGCGAATGCTCGCAATAAAGTCCTTGTTGCCCGGTGCGC 383
consensus_9711#2 GGGGCCCTTTTTTTGGGGAAG---GGTTTTTCCTTTTAAAAACCGGGGGGCCCCAAGGGG 124
* ** * * * * * * * ** * ** ** * *** * *
consensus_9711#0 TTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCC 937
consensus_9711#1 TTTGTGCAGCTTACCTTCAGCACGGGCCCAGCGTTTCCTTCCGCAACGAGCAGATTGGCC 443
consensus_9711#2 TTTTCCC--CCCCCCCCCAAAAAAAACCCAAAATTTTGGCCAACC-----CAGGGCCCCC 177
*** * * ** ** * **** *** * * *** **
consensus_9711#0 AGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAA-----CCTCCCGCT 992
consensus_9711#1 AGCAGCGCACAGCGCGTCTCGGTGCTGGGGATTTTGCGCACCACAA-----CCTCCCGCT 498
consensus_9711#2 CAAGGGGGGTTTTTTGGGTGGGTGGGGGGATTTTTGGGGCCCCCAAAAAACTTTCCCGTT 237
* * * * **** *** ***** * ** *** ***** *
consensus_9711#0 CGGCC--GTCACCATTGCCAGGTGGCTTTC-ACTCACG-ACCGTGCCCGGGGGG-CTGTA 1047
consensus_9711#1 CGGCC--GTCACCATTGCCAGGTGGCTTTC-ACTCACG-ACCGTGCCCGGGGGG-CTGTA 553
consensus_9711#2 TGGGCCGGTCACCATTGCCAGGGTGCTTTCCACTCACGGACCGTGCCCGGGGGGGCTTTA 297
** * *************** ****** ******* *************** ** **
consensus_9711#0 GCGC-AGGTTGAACATGCCCT-CGCAGTTCGAGCTGACCAGCGGGAACGGGCC-GGCACC 1104
consensus_9711#1 GCGC-AGGTTGAACATGCCCT-CGCAGTTCGAGCTGACCAGCGGGAACGGTCC-GGCACC 610
consensus_9711#2 GGGCCAGGTTGAACATGCCCTTCGCAGTTGGAGTTGACCAGCGGGAACGGGCCCGGCACC 357
* ** **************** ******* *** **************** ** ******
consensus_9711#0 GGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACAC 1164
consensus_9711#1 GGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACAC 670
consensus_9711#2 GGCACCGATGACAATGAACGGCTTCTCTTCGCCATGCAGAGCGCGTTTGGTGACGGACAC 417
************************************************************
consensus_9711#0 GAGATCGTAAAGCTTGGTACGATCGACCACGGGCAGTAGGTAGGGTGGTCCCCCGATTTC 1224
consensus_9711#1 GAGATCGTACAGCTTGGTACGATCGACCACGGGCAGTAGGTACGGTGGTCCCCCGATTTC 730
consensus_9711#2 GAGATCGTACAGCTTGGTACGATCGACCACGGGTAGTAGGTAGGGTGGTCCCCCGATTTC 477
********* *********************** ******** *****************
consensus_9711#0 AATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAA 1284
consensus_9711#1 AATCAGCGCGGGCGTTCCATTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAA 790
consensus_9711#2 GATCAGCGCGGGCGTTCCGTTTAAACCAGATCCGGCGAGATGGAAGGGCGCCTTGCTTAA 537
***************** *****************************************
consensus_9711#0 ATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGC 1344
consensus_9711#1 ATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGC 850
consensus_9711#2 ATCCGGACACTCTACCACTTCCACGCTAACCGTTGCGAAACAGGAGCCGAGTCCAGCGGC 597
************************************************************
consensus_9711#0 AAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAG 1404
consensus_9711#1 AAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAG 910
consensus_9711#2 AAGCACATCGCGCAATTCCGTCAGGGACGGTGTGTGCAGCGGCTTCTCTTCGAACAGTAG 657
************************************************************
consensus_9711#0 CTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAA-TGCCTTTCCGTGTCCGTG 1463
consensus_9711#1 CTTGGCCGTATCGAGACTCTCCATCGTGCAATGCGAGCGAA-TGCCTTTCCGTGTCCGTG 969
consensus_9711#2 CTTGGCCGTGTCGAGACTCTCCATCGTGCAATGCGAGCGAAATGTCTTTCCGCGGACGCG 717
********* ******************************* ** ******* * ** *
consensus_9711#0 CTGT--GCAACCGATCGTCGCGGGATGTGACCTCCCTCCCAGTGCTTCCCAGGAAACTGC 1521
consensus_9711#1 CTCCTCGTGGCCGATTCTG----------------------------------------- 988
consensus_9711#2 TGGGCGG----------------------------------------------------- 724
*
consensus_9711#0 GGACGCGATCGCGAGCGCGGTTGTTTATTCACTAGTTCTGCTTCTTATTCCCCATACACC 1581
consensus_9711#1 ------------------------------------------------------------
consensus_9711#2 ------------------------------------------------------------
consensus_9711#0 GG 1583
consensus_9711#1 --
consensus_9711#2 --
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||