These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9725#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1364 fasta sequence [GTTGGAGCGGCCGGCGTAGCATTTTGTTTTTTTTTTTTTTTTCTGTAATCCGCTCTCGCGATGGCTAGCAGTGTACCACTGT-TGCGAAATACACTGCAAAAAGGAAAAT-T-TGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG-ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG-GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT-GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAGACTTCCGTGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT-ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAACGGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT-GTCTTACGCTTGGTCAGTACATGCAGCCCACCAAACGGCATCTGAAGGTGATTGAGTACGTTACGCCGGAAAAGTTCAAACACTGGGAGGAGCGAGGCAATGAGCTCGGGTTCCTGTACACGGCCAGCGGTCCGCTGGTACGCAGCTCATACAAGGCAGGCGAGTTCTTCATCACTAGCATCCTGCGCAACCGGGCTAAGGAAGAGGAGGCAGCAAGAAGCGCGAACAAGGCAGGTACCGAATCGGCACAAGATTCAAAACATTCGTAAACCTTTTCGAGGGTTCGAAATAAAACCACAACATGAAATTGTTATGCTTTGCAAGCCTGTATAGTGTAATAAATGTTACTCTTTGTTGGTAAAAATTAAAAAAAAAA] [+] EMBL BX607195 [GTTGGAGCGGCCGGCGTAGCATTTTGTTTTTTTTTTTTTTTTCTGTAATTTTCTCTCGCGATGGCTAGCAGTGTACCACTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGACGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATCAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTTTGCGAGGAAGCAAAATGTCCCAACATCGGGGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCCCCACTGGATCCGGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGA ] [+] EMBL BM613337 [ CCGCTCTCGCGATGGCTAGCAGTGTACCACTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCGCTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAActt ] [+] EMBL BM647795 [ CCGCTCTCGCGATGGCTAGCAGTGTACCACTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCGCTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTTGTCGAATGTCTAGCGCCAGAC ] [+] EMBL CNS08Q6E [ TCTCGCGATGGCTAGCAGTGTACCACTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGTTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGA CAAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAGACTTCCGTGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAACGGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT GTCTTACGCTTGGTCAGTACATGCAGCCCACCAAACGGCATCTGAAGGTGATTGAGTACGTTACG ] [+] EMBL CNS08YDI [ TCGCGATGGCTAGCAGTGTACCACTGTCTGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGTTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGA CAAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAGACTTCCGTGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGATTCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAA GGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT ] [+] EMBL CNS08JEN [ GCGATGGCTAGCAGTGTA CACTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGTTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAG CAATGGAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAGACTTCCGTGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGC CTGACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAACGGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT GTCTTACGCTTGGTCAGT ] [+] EMBL BM627570 [ ccGGCTAGCAGTGTACCACTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAGCTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCC ] [+] EMBL BM583535 [ ccgTAGCAGTGTACCACTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCGCTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTTGTCGAATGTCTAGCGCC ] [+] EMBL BX616896 [ TGT TGCCCATTACACTGCAAAAAGGAAAAT T TGCTCCGCTAATTATCCCCCTGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGC GGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTTGTCGAATGTCTAGCGCCAGACTTCCGTGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTAGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTta ] [+] EMBL BM605503 [ ccgTGT TGCGAAATACACTGCAAAAAGGAAAAT T TGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAGCTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATC ] [+] EMBL CNS08OBX [ ATACACTGCAAAAAGGAAAATATATGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAGTTGGAGAAAATTCGCGAGCGCACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGAGAATGCTGGAAGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCGGCGGA CGAAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAGACTTCCGTGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAATTTACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATTGGTCTTAC ] [+] EMBL BX604100 [ AAACACAGTGCGGCCAGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCG ACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTT CCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAATGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGATAATGCTGG GGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACTGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGAT GAATACTGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGA ] [-] EMBL CNS08Q6F [ CAACATCGGAGAATGCTGG GGTGGTGGCGAACAT GTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGGTGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATTCCGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACTTCAGTCGATCGCGATGTTCTGCCGGACGGAGGCTCGAACCACATTGCAGCGGCGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAAACTTCCGTGGGGTTCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAACGGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT GTCTTACGCTTGGTCAGTACATGCAGCCCACCAAACGGCATCTGAAGGTGATTGAGTACGTTACGCCGGAAAAGTTCAAACACTGGGAGGAGCGAGGCAATGAGCTCGGGTTCCTGTACACGGCCAGCGGTCCGCTGGTACGCAGCTCATACAAGGCAGGCGAGTTCTTCATCACTAGCATCCTGCGCAACCGGGCTAAGGAAGAGGAGGCAGCAAGAAGCGCGAACAAGGCAGGTACCGAATCGGCACAAGATTCAAAACATTCGTAAACCTTTTCGAGGGTTCGAAATAAAACCACAACATGAAATTGTTAT CTTTGCAAGCCTGTATAGTGTAATAAATGTTACTCTTTGTT GTAAAAATTAAAAAAAAAA] [-] EMBL CNS08YDJ [ GACACGTGCACCCGGGGTTGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCTCCACTGGATCCCGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTAGGGCTTGGACTATATCGGACTCACATCAGTCGATCGCGATGTTCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAGACTTCCGTGGGGTTCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAACGGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT GTCTTACGCTTGGTCAGTACATGCAGCCCACCAAACGGCATCTGAAGGTGATTGAGTACGTTACGCCGGAAAAGTTCAAACACTGGGAGGAGCGAGGCAATGAGCTCGGGTTCCTGTACACGGCCAGCGGTCCGCTGGTACGCAGCTCATACAAGGCAGGCGAGTTCTTCATCACTAGCATCCTGCGCAACCGGGCTAAGGAAGAGGAGGCAGCAAGAAGCGCGAACAAGGCAGGTACCGAATCGGCACAAGATTCAAAACATTCGTAAACCTTTTCGAGGGTTCGAAATAAAACCACAACATGAAATTGTTATGCTTTGCAAGCCTGTATAGTGTAATAAATGTTACTCTTTGTTG ] [-] EMBL CNS08OBY [ GTAAAAACGGGACGGGCACCACCTCCACTGGATTCCGCGGAGCCGAT GAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATTTCGTACTCACTTCAGTCGATCGCGATGTTCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTCGTCGAATGTCTAGCGCCAGACTTCCGTGGGGTTCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGAGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGGTTCAACCCGAATCTCATGACCAAATCTTCTTTCATGCTTGGATTGGGTGAAACGGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT GTCTTACGCTTGGTCAGTACATGCAGCCCACCAAACGGCATCTGAAGGTGATTGAGTACGTTACGCCGGAAAAGTTCAAACACTGGGAGGAGCGAGGCAATGAGCTCGGGTTCCTGTACACGGCCAGCGGTCCGCTGGTACGCAGCTCATACAAGGCAGGCGAGTTCTTCATTACTAGCATCCTGCGCAACCGGGCTAAGGAAGAGGAGGCAGCAAGAAGCGCGAACAAGGCAGGTACCGAATCGGCACAAGATTCAAAACATTCGTAAACCTTTTCGAGGGTTCGAAATAAAACCACAACATGAAATTGTTATGCTTTGCAAGCCTGTATAG ] [+] EMBL BX617677 [ GGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTTGTCGAATGTCTAGCGCCAGACTTCCGTGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTAGAAGCGCTGACCCCGTTTGTGCGCGACCGCCGGGCGCGCT ACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTTAAACGGTTCAACCCGAATCTCATGACCAAATCTTCCATCATGCTTGGATTGGGTGAAACGGACGAGCAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATT GTCTTACGCTTGGTCAGTACATGCAGCCCACCAAACGGCATCTGAAGGTGATTGAGTACGTTACGCCGGAAAAGTTCAAACACTGGGAGGAGCGAGGCAATGAGCTCGGGTTCCTGTACACGGCCAGCGGTCCGCTGGTACGCAGCTCATACAAGGCAGGCGAGTTCTTCATCACTAGCATCTTGCGCAACCGGGCTAAGGAAGAGGAGGCAGCAAGAAGCGCGAACAAGGCAGGTACCGAATCGGCACAAGATTCAAAACATTAGTAAACCTTTTCGAGGGTTCGAAATAAAA CACAACATGAAATTGTTATGCTTTGCAAGCCTGTATAGTATAATAAATGTTACTCTTTGTTGGTAA ] [+] EMBL BM612791 [ ccgccCACGC GTCCGCC CAC GCGTCCG AGGTGATTGAGTACGTTACGCCGGAAAAGTTCAAACACTGGGAGGAGCGAGGCAATGAGCTCGGGTTCCTGTACACGGCCAGCGGTCCGCTGGTACGCAGCTCATACAAAGCAGGCGAGTTCTTCATCACTAGCATCTTGCGCAACCGGGCTAAGGAAGAGGAGGCAGCAAGAAGCGCGAACAAGGCAGGTACCGAATCGGCACAAGATTCAAAACATTCGTAAACCTTTTCGAGGGTTCGAAATAAAACCACAACATGAAATTGTTATGCTTTGCAAGCCTGTATAGTGTAATAAATGTTACTCTTTGTTGGTAAggactt ] consensusID : consensus_9725#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 686 fasta sequence [GAATCCCCCGAGGTTATAACAACAGCAAATCTTGCAATCCAGTTTTGTNTCTTCTCGTAATTTTCTCTCGCGATGGCTAGCAGTGTACCACTGTTGCGAAATACACTGCAAAAAGGAAAATTTGCTCCGCTAATTATCCCGCAGCAATGTAAACACAGTGCGG-CAGTGCCAGCAACCAGGCTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGT-CCAA-ATCGGAGAATGCTGGGGTGGTGGCCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACAACGTGCACCC--GGGGATGTCGCTTATGTAGCGTCAAACCCGGCACGGGCA-CA-CTCCACT-GGATCCGGCGNAG-CGAT-AATACGGCGACGG-CATCGCATCGTGGGGCTNGGACTANAATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGA] [+] EMBL AL932279 [GAATCCCCCGAGGTTATAACAACAGCAAATCTTGCAATCCAGTTTTGTNTCTTCTCGTAATTTTCTCTCGCGATGGCTAGCAGTGTACCACTGTTGCGAAATACACTGCAAAAAGGAAAATTTGCTCCGCTAATTATCCCGCAGCAATGTAAACACAGTGCGG CAGTGCCAGCAACCAGGCTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGT CCAA ATCGGAGAATGCTGGGGTGGTGGCCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACAACGTGCACCC GGGGATGTCGCTTATGTAGCGTCAAACCCGGCACGGGCA CA CTCCACT GGATCCGGCGNAG CGAT AATACGGCGACGG CATCGCATCGTGGGGCTNGGACTANAATCGT ] [+] EMBL BM578505 [ ccgAGCAAATCTTGCAATCCAGTTTTGT TTTTCT GTAATTTTCTCTCGCGATGGCTAGCAGTGTACCACTGTTGCGAAATACACTGCAAAAAGGAAAATTTGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCA GCTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGTCGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATCAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGGGAATGCTGGGGTGGTGG CGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGAC ACGTGCACCCCGGGGGATGTCGCTTTTGTAGCGT AAAAACGGCACGGGCACCACCCCCACTGGGATCCGGCGGAGCCGATGAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTA TATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGA] consensusID : consensus_9725#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 647 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGTTGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATCAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGGGAATGCTGGGGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCCCCACTGGATCCGGCGGAGCCGATGAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTTGTCGAATGTCTAGCGCCAGACTTCCGTGGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCT] [+] EMBL BM656926 [CCGCCCACGCGTCCGCCCACGCGTCCGGTGCCAGCAACCAGCTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACATCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGTTGCGAGAAGGGCGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGACTTCACCCGCATCAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGCAAAATGTCCCAACATCGGGGAATGCTGGGGTGGTGGCGAACATGGTACCCAGACGGCTACTATAATGCTCATGGGTGACACGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAACGGCACGGGCACCACCCCCACTGGATCCGGCGGAGCCGATGAATACGGCGACGGCCATCGCATCGTGGGGCTTGGACTATATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACGGAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTTTTGTCGAATGTCTAGCGCCAGACTTCCGTGGGGGATCTGCAGTGCATCGAAACGGTCGCAATGTCCGGGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9725#0 ------------GTTGGAGCGGCCGGCGTAGCATTTTGTTTTTTTTTTTTTTTTCTGTAA 48 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 GAATCCCCCGAGGTTATAACAACAGCAAATCTTGCAATCCAGTTTTGTNTCTTCTCGTAA 60 consensus_9725#0 TCCGCTCTCGCGATGGCTAGCAGTGTACCACTGTTGCGAAATACACTGCAAAAAGGAAAA 108 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 TTTTCTCTCGCGATGGCTAGCAGTGTACCACTGTTGCGAAATACACTGCAAAAAGGAAAA 120 consensus_9725#0 TTTGCTCCACTAATTATCCCGCAGCAATGTAAACACAGTGCGGCCAGTGCCAGCAACCAG 168 consensus_9725#2 ------------------CCGCCCACGCGTCCGCCCA-CGCGTCCGGTGCCAGCAACCAG 41 consensus_9725#1 TTTGCTCCGCTAATTATCCCGCAGCAATGTAAACACAGTGCGGC-AGTGCCAGCAACCAG 179 **** ** * ** *** * ************** consensus_9725#0 -CTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACA 227 consensus_9725#2 -CTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACA 100 consensus_9725#1 GCTGGAGAAAATTCGCGAGCGACTGGAGAGTGGACCCAACTTCCAGGACTTTGTGCAACA 239 *********************************************************** consensus_9725#0 TCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGG 287 consensus_9725#2 TCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGTTGCGAGAAGGG 160 consensus_9725#1 TCCGGACTACAACAAGGAGGACTGGACCGCCTACGAAGGGAAGCTGCGCCGCGAGAAGGG 299 ************************************************ ********** consensus_9725#0 CGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGA 347 consensus_9725#2 CGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGA 220 consensus_9725#1 CGAAAATGATCGGCTACGTTTGCCACCCTGGCTCAAGACGAAGATACCGATGGGTAAAGA 359 ************************************************************ consensus_9725#0 CTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGC 407 consensus_9725#2 CTTCACCCGCATCAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGC 280 consensus_9725#1 CTTCACCCGCATTAAGGAGCAGCTGCGGGAGCTAAAGCTTGCGACGGTGTGCGAGGAAGC 419 ************ *********************************************** consensus_9725#0 AAAATGTCCCAACATCGGAGAATGCTGGGGTGGTGGC-GAACATGGTACCCAGACGGCTA 466 consensus_9725#2 AAAATGTCCCAACATCGGGGAATGCTGGGGTGGTGGC-GAACATGGTACCCAGACGGCTA 339 consensus_9725#1 AAAATGTCCAA--ATCGGAGAATGCTGGGGTGGTGGCCGAACATGGTACCCAGACGGCTA 477 ********* * ***** ****************** ********************** consensus_9725#0 CTATAATGCTCATGGGTGACA-CGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAAC- 524 consensus_9725#2 CTATAATGCTCATGGGTGACA-CGTGCACCCGGGGATGTCGCTTTTGTAGCGTAAAAAC- 397 consensus_9725#1 CTATAATGCTCATGGGTGACAACGTGCACCCGGGGATGTCGCTTATGTAGCGTCAAACCC 537 ********************* ********************** ******** *** * consensus_9725#0 GGCACGGGCACCACCTCCACTGGATCCGGCGGAGCCGATGAATACGGCGACGGCCATCGC 584 consensus_9725#2 GGCACGGGCACCACCCCCACTGGATCCGGCGGAGCCGATGAATACGGCGACGGCCATCGC 457 consensus_9725#1 GGCACGGGCAC--ACTCCACTGGATCCGGCGNAGC-GAT-AATACGGCGACGGC-ATCGC 592 *********** * *************** *** *** ************** ***** consensus_9725#0 ATCGTGGGGCTTGGACTATA-TCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACG 643 consensus_9725#2 ATCGTGGGGCTTGGACTATA-TCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACG 516 consensus_9725#1 ATCGTGGGGCTNGGACTANAATCGTACTCACATCAGTCGATCGCGATGATCTGCCGGACG 652 *********** ****** * *************************************** consensus_9725#0 GAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTT 703 consensus_9725#2 GAGGCTCGAACCACATTGCAGCGACGATCAAAGAAATTAAGAAACAGAATCCTCGCATTT 576 consensus_9725#1 GAGGCTCGAACCACATTGCAGCGACGATCAAAGA-------------------------- 686 ********************************** consensus_9725#0 TCGTCGAATGTCTAGCGCCAGACTTCCGTGGGG-ATCTGCAGTGCATCGAAACGGTCGCA 762 consensus_9725#2 TTGTCGAATGTCTAGCGCCAGACTTCCGTGGGGGATCTGCAGTGCATCGAAACGGTCGCA 636 consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 ATGTCCGGGCTGGACGTGTACGCGCACAACATCGAAACGGTGGAAGCGCTGACCCCGTTT 822 consensus_9725#2 ATGTCCGGGCT------------------------------------------------- 647 consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 GTGCGCGACCGCCGGGCGCGCTACCGCCAAAGTCTGGAGTGTTTGGCTAGCGTAAAACGG 882 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 TTCAACCCGAATCTCATGACCAAATCTTCTATCATGCTTGGATTGGGTGAAACGGACGAG 942 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 CAGGTTGAACAGACGCTTAAAGATCTACGTTCCGTCGGTGTCGATTGTCTTACGCTTGGT 1002 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 CAGTACATGCAGCCCACCAAACGGCATCTGAAGGTGATTGAGTACGTTACGCCGGAAAAG 1062 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 TTCAAACACTGGGAGGAGCGAGGCAATGAGCTCGGGTTCCTGTACACGGCCAGCGGTCCG 1122 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 CTGGTACGCAGCTCATACAAGGCAGGCGAGTTCTTCATCACTAGCATCCTGCGCAACCGG 1182 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 GCTAAGGAAGAGGAGGCAGCAAGAAGCGCGAACAAGGCAGGTACCGAATCGGCACAAGAT 1242 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 TCAAAACATTCGTAAACCTTTTCGAGGGTTCGAAATAAAACCACAACATGAAATTGTTAT 1302 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 GCTTTGCAAGCCTGTATAGTGTAATAAATGTTACTCTTTGTTGGTAAAAATTAAAAAAAA 1362 consensus_9725#2 ------------------------------------------------------------ consensus_9725#1 ------------------------------------------------------------ consensus_9725#0 AA 1364 consensus_9725#2 -- consensus_9725#1 -- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||